Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P09
         (412 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U00031-5|AAP68960.1|  534|Caenorhabditis elegans Hypothetical pr...    27   4.0  
U64849-4|AAC48054.2|  217|Caenorhabditis elegans Saposin-like pr...    26   9.2  

>U00031-5|AAP68960.1|  534|Caenorhabditis elegans Hypothetical
           protein B0361.11 protein.
          Length = 534

 Score = 27.5 bits (58), Expect = 4.0
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 3/43 (6%)
 Frame = -2

Query: 297 YHTDGQTLIHTYII---LNLFPLYSIYFR*VIKHNLDRQCAFR 178
           Y   G+  I TY++   LN F   S+Y    ++ NL++QC ++
Sbjct: 43  YGAYGKYQIFTYVLVQTLNFFYSSSMYIMSFVQLNLEKQCEYK 85


>U64849-4|AAC48054.2|  217|Caenorhabditis elegans Saposin-like
           protein family protein20 protein.
          Length = 217

 Score = 26.2 bits (55), Expect = 9.2
 Identities = 8/24 (33%), Positives = 18/24 (75%)
 Frame = +1

Query: 67  DYKKYVVSF*DLFNIYNYLFLFKI 138
           +Y+++++SF  L+N+   LF+F +
Sbjct: 94  NYERHIISFHQLYNMLKTLFIFTL 117


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,651,299
Number of Sequences: 27780
Number of extensions: 123230
Number of successful extensions: 205
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 205
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 662437636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)