Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_P05
(465 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical... 29 1.6
Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical pr... 27 6.6
X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodom... 27 6.6
U00034-2|AAM15548.1| 378|Caenorhabditis elegans Pim (mammalian ... 27 6.6
U00034-1|AAA50639.2| 566|Caenorhabditis elegans Pim (mammalian ... 27 6.6
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 27 6.6
AF125959-3|AAD14731.1| 531|Caenorhabditis elegans Udp-glucurono... 27 6.6
AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cut... 27 6.6
AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans hom... 27 6.6
U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical pr... 27 8.8
U40942-6|AAP68937.1| 709|Caenorhabditis elegans High temperatur... 27 8.8
U40942-5|AAC47068.1| 729|Caenorhabditis elegans High temperatur... 27 8.8
AY070228-1|AAL55425.1| 729|Caenorhabditis elegans HID-1 protein. 27 8.8
AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 27 8.8
>AF003139-11|AAK73871.1| 1503|Caenorhabditis elegans Hypothetical
protein F53G12.3 protein.
Length = 1503
Score = 29.1 bits (62), Expect = 1.6
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +2
Query: 287 RKTRTGSVFTAANSKGVYGSGNYDLSNLE 373
R TGS F + KG YG GN + N E
Sbjct: 1301 RSLNTGSPFPLIHMKGPYGDGNQEWMNYE 1329
>Z68750-1|CAA92963.1| 284|Caenorhabditis elegans Hypothetical
protein K01A6.4 protein.
Length = 284
Score = 27.1 bits (57), Expect = 6.6
Identities = 21/80 (26%), Positives = 31/80 (38%), Gaps = 2/80 (2%)
Frame = +2
Query: 161 GFYGAQRGNMGGNFERAH--NMDGLAQHQMGGLVKQVQGELGEGRKTRTGSVFTAANSKG 334
GF G Q+G GG ++ G + GG Q G G+G+++ G F + G
Sbjct: 106 GFEG-QQGGFGGFGQQVGFGGQGGFGGNSQGGFGGQQSGFGGQGQQSGFGGGFGGNSQNG 164
Query: 335 VYGSGNYDLSNLEGRNFQEG 394
S G+ Q G
Sbjct: 165 FPAQRPSQQSGFGGQGMQSG 184
>X17077-1|CAA34929.1| 202|Caenorhabditis elegans ceh-13 homeodomain
protein protein.
Length = 202
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 224 HPYCARVQNSLPYFPSEHHKSQIYFLHPRNF 132
H Y V +S Y P HH + I+ HP N+
Sbjct: 22 HSYYPSVPSS--YSPLNHHPADIWAAHPSNY 50
>U00034-2|AAM15548.1| 378|Caenorhabditis elegans Pim (mammalian
oncogene) relatedkinase protein 1, isoform c protein.
Length = 378
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 203 QNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLP 84
Q + Y P E + Q+Y W++G LLF+ LP
Sbjct: 198 QGTRSYCPPEWFRDQLYLPLEATSWSLGVLLFILLTGKLP 237
>U00034-1|AAA50639.2| 566|Caenorhabditis elegans Pim (mammalian
oncogene) relatedkinase protein 1, isoform a protein.
Length = 566
Score = 27.1 bits (57), Expect = 6.6
Identities = 13/40 (32%), Positives = 19/40 (47%)
Frame = -2
Query: 203 QNSLPYFPSEHHKSQIYFLHPRNFWNIGNLLFLGTVQVLP 84
Q + Y P E + Q+Y W++G LLF+ LP
Sbjct: 198 QGTRSYCPPEWFRDQLYLPLEATSWSLGVLLFILLTGKLP 237
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 287 RKTRTGSVFTAANSKGVYGSGNYDLSNLE 373
R TGS F + KG YG GN + + E
Sbjct: 1295 RSLNTGSPFPLIHMKGPYGDGNQEWMDYE 1323
>AF125959-3|AAD14731.1| 531|Caenorhabditis elegans
Udp-glucuronosyltransferase protein14 protein.
Length = 531
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/53 (22%), Positives = 25/53 (47%)
Frame = -2
Query: 173 HHKSQIYFLHPRNFWNIGNLLFLGTVQVLPQLKLISQLKAVSAPYRRFTVIFE 15
H K+ +YFL F + N+L + +K ++Q+ + A + +F+
Sbjct: 2 HVKTLVYFLLFTGFISCKNILIFNPIFAFSHVKFVTQMADIIADHGHNVTLFQ 54
>AF043697-1|AAK73882.1| 1497|Caenorhabditis elegans Blistered cuticle
protein 3 protein.
Length = 1497
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/29 (41%), Positives = 15/29 (51%)
Frame = +2
Query: 287 RKTRTGSVFTAANSKGVYGSGNYDLSNLE 373
R TGS F + KG YG GN + + E
Sbjct: 1295 RSLNTGSPFPLIHMKGPYGDGNQEWMDYE 1323
>AC006679-1|AAK84466.1| 202|Caenorhabditis elegans C.elegans
homeobox protein 13 protein.
Length = 202
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -2
Query: 224 HPYCARVQNSLPYFPSEHHKSQIYFLHPRNF 132
H Y V +S Y P HH + I+ HP N+
Sbjct: 22 HSYYPSVPSS--YSPLNHHPADIWAAHPSNY 50
>U41009-1|AAA82278.3| 501|Caenorhabditis elegans Hypothetical
protein C06E7.2 protein.
Length = 501
Score = 26.6 bits (56), Expect = 8.8
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -2
Query: 227 NHPYCARVQNSLPYFPSEHHKSQIYFLHP 141
+H + + NSLPY H K Q++ L P
Sbjct: 113 DHLFRYSLLNSLPYASCSHSKDQLFQLEP 141
>U40942-6|AAP68937.1| 709|Caenorhabditis elegans High
temperature-induced dauerformation protein 1, isoform b
protein.
Length = 709
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 242 FGVALNHPYCARVQNSLPYFPSEHHKSQIYFLH 144
FGV LN PY A+ ++ F H I +H
Sbjct: 400 FGVRLNKPYTAKANINVQTFTGTHADLLILVIH 432
>U40942-5|AAC47068.1| 729|Caenorhabditis elegans High
temperature-induced dauerformation protein 1, isoform a
protein.
Length = 729
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 242 FGVALNHPYCARVQNSLPYFPSEHHKSQIYFLH 144
FGV LN PY A+ ++ F H I +H
Sbjct: 400 FGVRLNKPYTAKANINVQTFTGTHADLLILVIH 432
>AY070228-1|AAL55425.1| 729|Caenorhabditis elegans HID-1 protein.
Length = 729
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/33 (36%), Positives = 16/33 (48%)
Frame = -2
Query: 242 FGVALNHPYCARVQNSLPYFPSEHHKSQIYFLH 144
FGV LN PY A+ ++ F H I +H
Sbjct: 400 FGVRLNKPYTAKANINVQTFTGTHADLLILVIH 432
>AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical
protein F52F10.2 protein.
Length = 508
Score = 26.6 bits (56), Expect = 8.8
Identities = 12/25 (48%), Positives = 15/25 (60%)
Frame = -3
Query: 160 RFTSFIRGTSGILEIFFFSVQFRFC 86
R TSF+ G SG+L +F F FC
Sbjct: 327 RITSFLMGGSGLLSMFVIG-SFMFC 350
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,313,550
Number of Sequences: 27780
Number of extensions: 163182
Number of successful extensions: 414
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 403
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 414
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 829055604
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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