Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P05
         (465 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.       23   1.6  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    22   2.8  
AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein...    22   2.8  
EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage prot...    21   6.5  
DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase doma...    21   6.5  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    21   6.5  

>AY898652-1|AAX83121.1|  349|Apis mellifera AKH receptor protein.
          Length = 349

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/36 (27%), Positives = 19/36 (52%)
 Frame = +3

Query: 300 LVVYSLLLIQKVFTGRVIMI*VTSKVAISKKAFLLM 407
           +V YS+L+I        ++I +T +  +SK    +M
Sbjct: 41  IVFYSVLMIISAIGNTTVLILITCRKRVSKSRIHIM 76


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/28 (32%), Positives = 15/28 (53%)
 Frame = -2

Query: 215 CARVQNSLPYFPSEHHKSQIYFLHPRNF 132
           CA ++ ++P FP       ++FL P  F
Sbjct: 193 CAMLKENMPEFPLYQLSCILFFLIPMVF 220


>AY661557-1|AAT74557.1|  411|Apis mellifera yellow-f-like protein
           protein.
          Length = 411

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 14/40 (35%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 7   LIYSNITVKRRYGALTAFSCD-ISFSCGKT*TVPRKRRFP 123
           L++S    K+R   +T F  D ++ +C K    P KRR P
Sbjct: 370 LLFSKYDAKKRNFFITMFDLDFLTNACKKKDDKP-KRRLP 408


>EF625899-1|ABR45906.1| 1010|Apis mellifera high Glx storage protein
           protein.
          Length = 1010

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/22 (40%), Positives = 11/22 (50%)
 Frame = +2

Query: 167 YGAQRGNMGGNFERAHNMDGLA 232
           YG QRG  GG       + G+A
Sbjct: 896 YGMQRGQSGGQTWSNSQVQGVA 917


>DQ067178-1|AAZ20250.1|  448|Apis mellifera conserved ATPase domain
           protein protein.
          Length = 448

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 8/20 (40%), Positives = 12/20 (60%)
 Frame = -3

Query: 454 CVIACMR**RRLGLRVIKRN 395
           C ++C+R  R LG + I  N
Sbjct: 399 CAVSCLRELRNLGRKTIMVN 418


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -3

Query: 406 IKRNAFLEIATFEVTQIIITRPVN 335
           ++RNA +EIA   +T + + R  N
Sbjct: 244 LQRNAIVEIAGDALTGLTVLRTFN 267


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,547
Number of Sequences: 438
Number of extensions: 2384
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12436029
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)