Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P04
         (422 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical p...    42   2e-04
Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical pr...    34   0.048
U29377-10|AAA68717.1|  140|Caenorhabditis elegans Hypothetical p...    31   0.34 
AF016450-10|AAB65990.1|  166|Caenorhabditis elegans Hypothetical...    30   0.59 
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr...    29   1.0  
Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical pr...    29   1.0  
U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical pr...    29   1.8  
AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density l...    29   1.8  
U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in bl...    28   3.2  
Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical pr...    27   4.2  
Z79756-10|CAL36507.1|   80|Caenorhabditis elegans Hypothetical p...    27   5.5  
AC006809-3|AAY86286.1|  558|Caenorhabditis elegans Hypothetical ...    27   7.3  
Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical pr...    26   9.7  
Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical p...    26   9.7  
Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical p...    26   9.7  
U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in bl...    26   9.7  
AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane...    26   9.7  
AF078785-4|AAC27089.3|  609|Caenorhabditis elegans Hypothetical ...    26   9.7  

>U50311-12|AAA92315.1|  169|Caenorhabditis elegans Hypothetical
           protein C25E10.10 protein.
          Length = 169

 Score = 41.5 bits (93), Expect = 2e-04
 Identities = 25/66 (37%), Positives = 33/66 (50%), Gaps = 1/66 (1%)
 Frame = -3

Query: 396 IPIRKCPA-GEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNVRNLKTGKC 220
           IPIRK    G+  +  C    EP+CDN    E D    +C    C C    VR+  TGKC
Sbjct: 70  IPIRKPECEGDEELKACGSACEPTCDNENP-ECDL---VCMTNVCQCKKGLVRDSATGKC 125

Query: 219 IKLSKC 202
           ++ +KC
Sbjct: 126 VEKNKC 131


>Z81097-4|CAB03176.1|  100|Caenorhabditis elegans Hypothetical
           protein K07A1.6 protein.
          Length = 100

 Score = 33.9 bits (74), Expect = 0.048
 Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
 Frame = -3

Query: 327 CDNPTVHEMDPPSGLCDVP----QCFCNVPNVR-NLKTGKCIKLSKC 202
           C+    H   PP   C +P     C CN    R N  TG+C++L +C
Sbjct: 51  CEKSCTHPRQPPFSQCKLPCIPYSCRCNPGFYRDNQGTGRCVRLRRC 97


>U29377-10|AAA68717.1|  140|Caenorhabditis elegans Hypothetical
           protein K05F1.10 protein.
          Length = 140

 Score = 31.1 bits (67), Expect = 0.34
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 7/68 (10%)
 Frame = -3

Query: 384 KCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGL-------CDVPQCFCNVPNVRNLKTG 226
           +C   EH ++  P++    CD    +   PP  L       C  P+C CN   VR+ K G
Sbjct: 52  ECQKHEHHLICGPER---HCDRTCENLFSPPHCLNHLHHAKCYFPRCVCNDGYVRSEK-G 107

Query: 225 KCIKLSKC 202
            CI+ S C
Sbjct: 108 ICIRPSHC 115


>AF016450-10|AAB65990.1|  166|Caenorhabditis elegans Hypothetical
           protein B0238.12 protein.
          Length = 166

 Score = 30.3 bits (65), Expect = 0.59
 Identities = 21/68 (30%), Positives = 30/68 (44%)
 Frame = -3

Query: 405 GQGIPIRKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNVRNLKTG 226
           GQ +P   C         C    EPSC NP  + M     + +V  C C    VRN  T 
Sbjct: 32  GQRLP---CRGRNEEYKTCGTACEPSCTNP--NPMCTKQCINNV--CQCRSGYVRNEITR 84

Query: 225 KCIKLSKC 202
           +C++ ++C
Sbjct: 85  QCVRQAQC 92


>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical
           protein T01D3.3b protein.
          Length = 1011

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 15/51 (29%), Positives = 19/51 (37%)
 Frame = -3

Query: 396 IPIRKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNV 244
           IP + C     +   C  +   SCD P          L   P CFC +P V
Sbjct: 478 IPEQHCEHPLKNYQSCGSKCPASCDRPLSQAASIDCALSCEPGCFCRLPYV 528


>Z81110-2|CAB03259.1|  802|Caenorhabditis elegans Hypothetical
           protein T01D3.3a protein.
          Length = 802

 Score = 29.5 bits (63), Expect = 1.0
 Identities = 15/51 (29%), Positives = 19/51 (37%)
 Frame = -3

Query: 396 IPIRKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNV 244
           IP + C     +   C  +   SCD P          L   P CFC +P V
Sbjct: 269 IPEQHCEHPLKNYQSCGSKCPASCDRPLSQAASIDCALSCEPGCFCRLPYV 319


>U64605-3|AAF98605.3|  423|Caenorhabditis elegans Hypothetical
           protein C05D9.3 protein.
          Length = 423

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 15/47 (31%), Positives = 19/47 (40%)
 Frame = -3

Query: 384 KCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNV 244
           +CP   H V     + E  C   +   +   SG C   QC CN P V
Sbjct: 253 ECPLASHGVSKA-SELEDKCRFNSSSPVCSASGKCKCGQCQCNKPTV 298


>AF003133-3|AAB54138.2| 2192|Caenorhabditis elegans Low-density
            lipoprotein receptorrelated protein 2 protein.
          Length = 2192

 Score = 28.7 bits (61), Expect = 1.8
 Identities = 18/66 (27%), Positives = 27/66 (40%), Gaps = 4/66 (6%)
 Frame = -3

Query: 396  IPIRKCPAGEHSVLYCPQQAEPS----CDNPTVHEMDPPSGLCDVPQCFCNVPNVRNLKT 229
            I IR     +H+V +   Q  P     C + TV   D       +P+C C       + T
Sbjct: 1570 IQIRVAHPAKHTVSHITHQKNPCQSDYCPSNTVCVPDQDKNGILIPKCLCGPGRFFEVST 1629

Query: 228  GKCIKL 211
             KC++L
Sbjct: 1630 KKCMQL 1635


>U46675-3|AAB52643.1|  375|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 10 protein.
          Length = 375

 Score = 27.9 bits (59), Expect = 3.2
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -3

Query: 351 CPQQAEPSCDNPTVHEMDPPSGLCDVPQCFC 259
           C QQA+P+CD   V + +P +     P C C
Sbjct: 259 CCQQAQPACDCAPVVQQNPCACQQAQPSCDC 289


>Z71177-2|CAA94867.1|  425|Caenorhabditis elegans Hypothetical
           protein AC3.3 protein.
          Length = 425

 Score = 27.5 bits (58), Expect = 4.2
 Identities = 11/48 (22%), Positives = 15/48 (31%)
 Frame = -3

Query: 387 RKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNV 244
           ++C         C QQ  P C  P+  +       C  P      P V
Sbjct: 293 QQCQTSCQQTQQCQQQCTPQCQQPSAPQCQQCQSACQAPVATTAAPQV 340


>Z79756-10|CAL36507.1|   80|Caenorhabditis elegans Hypothetical
           protein F53C11.9 protein.
          Length = 80

 Score = 27.1 bits (57), Expect = 5.5
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
 Frame = -3

Query: 390 IRKCPAGEHSVLY-CPQQAEPSCDNPTVHEMDPPSGLCDVPQCFCNVPNVRNLKTGKCIK 214
           + K   GE+ +   C    + +C+NP    +      C+  Q F     V +  T KCI 
Sbjct: 18  LAKNQCGENEIFNDCGSPCDRTCENPNPMCIQMCKARCECKQGF-----VVDSNTKKCID 72

Query: 213 LSKC 202
           L KC
Sbjct: 73  LKKC 76


>AC006809-3|AAY86286.1|  558|Caenorhabditis elegans Hypothetical
           protein Y5H2A.4 protein.
          Length = 558

 Score = 26.6 bits (56), Expect = 7.3
 Identities = 10/36 (27%), Positives = 14/36 (38%)
 Frame = -3

Query: 378 PAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVP 271
           P  + +V  C QQ  P C  P+  +       C  P
Sbjct: 232 PTCQQAVPQCQQQCAPQCQQPSAPQCQQCQSACQSP 267


>Z30974-5|CAH19087.1| 3183|Caenorhabditis elegans Hypothetical protein
            K08E5.3b protein.
          Length = 3183

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 333  PSCDNPTVHEMDPP 292
            P CDNPT+++ D P
Sbjct: 1227 PECDNPTLNDCDSP 1240


>Z30974-4|CAA83226.2| 3767|Caenorhabditis elegans Hypothetical protein
            K08E5.3a protein.
          Length = 3767

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 333  PSCDNPTVHEMDPP 292
            P CDNPT+++ D P
Sbjct: 1811 PECDNPTLNDCDSP 1824


>Z30423-15|CAH19103.1| 3183|Caenorhabditis elegans Hypothetical
            protein K08E5.3b protein.
          Length = 3183

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 333  PSCDNPTVHEMDPP 292
            P CDNPT+++ D P
Sbjct: 1227 PECDNPTLNDCDSP 1240


>Z30423-14|CAC42345.1| 3767|Caenorhabditis elegans Hypothetical
            protein K08E5.3a protein.
          Length = 3767

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 333  PSCDNPTVHEMDPP 292
            P CDNPT+++ D P
Sbjct: 1811 PECDNPTLNDCDSP 1824


>U51997-1|AAG24067.1|  572|Caenorhabditis elegans Activated in
           blocked unfolded proteinresponse protein 2 protein.
          Length = 572

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 10/39 (25%), Positives = 14/39 (35%)
 Frame = -3

Query: 387 RKCPAGEHSVLYCPQQAEPSCDNPTVHEMDPPSGLCDVP 271
           ++C A       C QQ  P C  P+  +       C  P
Sbjct: 443 QQCQASCQQTQQCQQQCIPQCQQPSAPQCQQCQSACQFP 481


>AF139060-1|AAD29428.1| 3767|Caenorhabditis elegans transmembrane cell
            adhesion receptorMUA-3 precursor protein.
          Length = 3767

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 8/14 (57%), Positives = 11/14 (78%)
 Frame = -3

Query: 333  PSCDNPTVHEMDPP 292
            P CDNPT+++ D P
Sbjct: 1811 PECDNPTLNDCDSP 1824


>AF078785-4|AAC27089.3|  609|Caenorhabditis elegans Hypothetical
           protein C04E12.4 protein.
          Length = 609

 Score = 26.2 bits (55), Expect = 9.7
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = -2

Query: 241 KP*NRKVHQTVKMLNIISIFKKNLN*LHSFEILSIFKYFS 122
           KP   K    +++   I +FK  LN   S E +SI  Y+S
Sbjct: 570 KPQFNKFFMRIELFKNIKVFKTELNDRSSVESISIVVYWS 609


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,297,854
Number of Sequences: 27780
Number of extensions: 174259
Number of successful extensions: 506
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 476
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 503
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 692685370
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)