Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P04
         (422 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.    23   1.4  
EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2 prot...    23   1.4  
AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2 prot...    23   1.4  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          21   7.5  
AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase pro...    21   7.5  

>X16709-1|CAA34681.1|  162|Apis mellifera phospholipase A-2 protein.
          Length = 162

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 384 KCPAGEHSVLYCPQQAEPSCDNPTVHEMDP 295
           KC   EH V  C ++ E  C + TV +  P
Sbjct: 122 KCYKLEHPVTGCGERTEGRCLHYTVDKSKP 151


>EF373554-1|ABQ28728.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 384 KCPAGEHSVLYCPQQAEPSCDNPTVHEMDP 295
           KC   EH V  C ++ E  C + TV +  P
Sbjct: 127 KCYKLEHPVTGCGERTEGRCLHYTVDKSKP 156


>AF438408-1|AAL30844.1|  167|Apis mellifera phospholipase A2
           protein.
          Length = 167

 Score = 23.0 bits (47), Expect = 1.4
 Identities = 11/30 (36%), Positives = 15/30 (50%)
 Frame = -3

Query: 384 KCPAGEHSVLYCPQQAEPSCDNPTVHEMDP 295
           KC   EH V  C ++ E  C + TV +  P
Sbjct: 127 KCYKLEHPVTGCGERTEGRCLHYTVDKSKP 156


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/16 (56%), Positives = 9/16 (56%)
 Frame = +2

Query: 266 HCGTSHSPDGGSISWT 313
           H G S S   GS SWT
Sbjct: 397 HSGQSSSHHHGSKSWT 412


>AB253416-1|BAE86927.1|  580|Apis mellifera alpha-glucosidase
           protein.
          Length = 580

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +1

Query: 190 KLYLTF*QFDALSGFKVSNVRYVAEALRYVAQP 288
           K  LTF     + GF++  + ++ E  R + +P
Sbjct: 206 KNVLTFWMNRGVDGFRIDAINHMFEDARLLDEP 238


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,966
Number of Sequences: 438
Number of extensions: 2046
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10873896
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)