BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_P02
(463 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor... 23 3.9
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different... 23 5.2
AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein. 23 5.2
AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcript... 23 5.2
>DQ989011-1|ABK97612.1| 467|Anopheles gambiae gustatory receptor 22
protein.
Length = 467
Score = 23.4 bits (48), Expect = 3.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 296 SWTLSLCTHLVY*YFVKYFENCHT 367
SW+LSL L Y F+ CHT
Sbjct: 210 SWSLSLVIILSQYYLQPDFQFCHT 233
>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
differentiation regulator protein.
Length = 1283
Score = 23.0 bits (47), Expect = 5.2
Identities = 12/32 (37%), Positives = 15/32 (46%)
Frame = -1
Query: 109 SKDPPPASTTCFKFSKLGASVHPLHQIPTAHH 14
SK PP + S +GA H LH + HH
Sbjct: 796 SKAPPHPHSALSSHSPVGAGSHHLHHL---HH 824
>AF008575-1|AAB87764.1| 525|Anopheles gambiae chitinase protein.
Length = 525
Score = 23.0 bits (47), Expect = 5.2
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = +2
Query: 308 SLCTHLVY*YF 340
SLCTHL+Y +F
Sbjct: 58 SLCTHLMYGFF 68
>AB090818-2|BAC57912.1| 988|Anopheles gambiae reverse transcriptase
protein.
Length = 988
Score = 23.0 bits (47), Expect = 5.2
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -3
Query: 59 WRVCAPTPPDTN 24
WRVC TP D N
Sbjct: 195 WRVCDETPSDHN 206
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 481,953
Number of Sequences: 2352
Number of extensions: 9755
Number of successful extensions: 21
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 39969834
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -