Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P02
         (463 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   2.1  
DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex det...    21   6.5  
DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex det...    21   6.5  
DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex det...    21   6.5  
DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex det...    21   6.5  

>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = -2

Query: 114 LTPKIHLPPQLHASSFLNLARLCTHSTRYQL 22
           +TP+  LP Q   S +L    L T    YQL
Sbjct: 257 MTPQSLLPSQTGLSPYLRFGCLSTRLFYYQL 287


>DQ325087-1|ABD14101.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 401 IHNNEYF*NLNMYDSFQNTLQNINIL 324
           IHNN Y  N N  +  +    NIN +
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ325086-1|ABD14100.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 401 IHNNEYF*NLNMYDSFQNTLQNINIL 324
           IHNN Y  N N  +  +    NIN +
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ325085-1|ABD14099.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 401 IHNNEYF*NLNMYDSFQNTLQNINIL 324
           IHNN Y  N N  +  +    NIN +
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


>DQ325084-1|ABD14098.1|  179|Apis mellifera complementary sex
           determiner protein.
          Length = 179

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = -3

Query: 401 IHNNEYF*NLNMYDSFQNTLQNINIL 324
           IHNN Y  N N  +  +    NIN +
Sbjct: 90  IHNNNYKYNYNNNNYNKKLYYNINYI 115


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 130,642
Number of Sequences: 438
Number of extensions: 2601
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12312900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)