Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_P01
         (556 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    28   0.047
AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain tran...    25   0.58 
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   3.1  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       22   4.1  
L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protei...    21   5.5  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    21   7.2  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    21   9.5  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      21   9.5  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      21   9.5  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 28.3 bits (60), Expect = 0.047
 Identities = 16/51 (31%), Positives = 22/51 (43%)
 Frame = +3

Query: 357 CMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCE 509
           C    C  G VC I++ G  IC    +CP  T+         NE  S+ C+
Sbjct: 380 CDSNPCQNGGVCRISDGGGYIC----DCPSGTNGTNCEIDTINECDSNPCK 426


>AY043292-1|AAK96031.1|  323|Tribolium castaneum homeodomain
           transcription factor Prothoraxlessprotein.
          Length = 323

 Score = 24.6 bits (51), Expect = 0.58
 Identities = 12/32 (37%), Positives = 13/32 (40%)
 Frame = +2

Query: 185 DVGGASPRGHLRVGAPRERHGGEPGRETIPGG 280
           D G   P   LR G P   +GG P     P G
Sbjct: 46  DPGSCDPSVGLRQGIPPHHYGGPPSGGQPPQG 77


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 13/52 (25%), Positives = 24/52 (46%), Gaps = 3/52 (5%)
 Frame = +3

Query: 201 PRGD---ISESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINL 347
           P+GD       E L NG+   L  +R + ++ A  + +   +  + D  IN+
Sbjct: 839 PKGDNRYTIREEILANGVLSGLSIKRTERSDSALFTCVATNAFGSDDTSINM 890


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.8 bits (44), Expect = 4.1
 Identities = 9/28 (32%), Positives = 17/28 (60%)
 Frame = -1

Query: 517 RYTSQSDDQVSLKFVHTLRLESVSYGHS 434
           RY+ + D   + K+ H+L++    YGH+
Sbjct: 286 RYSCR-DCSYATKYCHSLKIHLRRYGHT 312


>L01615-1|AAA30095.1|   69|Tribolium castaneum zinc finger protein
           protein.
          Length = 69

 Score = 21.4 bits (43), Expect = 5.5
 Identities = 9/27 (33%), Positives = 16/27 (59%)
 Frame = -1

Query: 517 RYTSQSDDQVSLKFVHTLRLESVSYGH 437
           RY+ + D   + K+ H+L++    YGH
Sbjct: 44  RYSCR-DCSYATKYCHSLKIHLRRYGH 69


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 21.0 bits (42), Expect = 7.2
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = -3

Query: 164 T*APMASTMFLDLGVDRADD 105
           T APM S++   LG+D + D
Sbjct: 756 TTAPMGSSILKRLGIDESVD 775


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
          Length = 2700

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = +3

Query: 492  WSSDCEVYRQRCLCLDH 542
            W+ D + ++ RC C  H
Sbjct: 2661 WALDLDDFKNRCGCGKH 2677


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 194 GASPRGHLRVGAPRERHGGEP 256
           G +P GH     P   H G+P
Sbjct: 113 GLAPTGHPGAALPFFCHNGDP 133


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 20.6 bits (41), Expect = 9.5
 Identities = 8/21 (38%), Positives = 10/21 (47%)
 Frame = +2

Query: 194 GASPRGHLRVGAPRERHGGEP 256
           G +P GH     P   H G+P
Sbjct: 5   GLAPTGHPGAALPFFCHNGDP 25


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 117,480
Number of Sequences: 336
Number of extensions: 2396
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 13725787
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)