Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_P01
(556 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin pro... 71 6e-13
AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin (... 71 6e-13
U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical p... 43 1e-04
AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synapt... 43 1e-04
AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical ... 33 0.18
AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical ... 33 0.18
U55364-2|AAN84822.2| 317|Caenorhabditis elegans Hypothetical pr... 31 0.74
U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical p... 30 1.3
Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical pr... 29 3.0
Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical p... 29 3.0
U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical p... 29 3.0
U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical p... 29 3.0
AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical ... 29 3.0
AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha... 29 3.0
U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protei... 28 3.9
Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 28 5.2
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 28 5.2
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 28 5.2
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 28 5.2
AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric c... 27 6.9
Z82265-3|CAB05173.1| 471|Caenorhabditis elegans Hypothetical pr... 27 9.1
U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical pr... 27 9.1
U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crum... 27 9.1
U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical pr... 27 9.1
U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical pr... 27 9.1
AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical ... 27 9.1
>L21758-1|AAA16827.1| 264|Caenorhabditis elegans osteonectin
protein.
Length = 264
Score = 70.9 bits (166), Expect = 6e-13
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 351 DPCMKVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 527
+PC C G+ C + + GE C CI +CP + D KVC N N+T++S C++YR+RC
Sbjct: 51 NPCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERC 110
Query: 528 LCLDHSELC 554
LC S+ C
Sbjct: 111 LCKRKSKEC 119
>AF036692-3|AAB88325.1| 264|Caenorhabditis elegans Osteonectin
(sparc) related protein1 protein.
Length = 264
Score = 70.9 bits (166), Expect = 6e-13
Identities = 29/69 (42%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Frame = +3
Query: 351 DPCMKVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 527
+PC C G+ C + + GE C CI +CP + D KVC N N+T++S C++YR+RC
Sbjct: 51 NPCEDHQCGWGKECVVGKKGEPTCECISKCPELDGDPMDKVCANNNQTFTSLCDLYRERC 110
Query: 528 LCLDHSELC 554
LC S+ C
Sbjct: 111 LCKRKSKEC 119
>U39999-14|ABF71722.1| 1483|Caenorhabditis elegans Hypothetical
protein F41G3.12 protein.
Length = 1483
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 363 KVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 527
K C C + E+ +A C C +CP YE + ++VC T+SS+C + + C
Sbjct: 515 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 570
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 354 PCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 527
PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 369 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 423
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 351 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 527
DPC C G+ C++ C C ++C T + VC +T+ ++C + C
Sbjct: 294 DPCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 349
Score = 30.3 bits (65), Expect = 0.97
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 372 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRCL 530
C +VC + + G+ C CP TD ++VC + +T+S++C + C+
Sbjct: 448 CKKPQVCVVVD-GKPKC----VCPSCTDEFKEVCGSDGKTYSNECRLQNAACM 495
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/59 (23%), Positives = 20/59 (33%)
Frame = +3
Query: 351 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 527
D C+ V C G C +C C CP ++C + S C + C
Sbjct: 585 DECLHVQCRYGEECR-----SGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASC 638
>AM773423-1|CAO78927.1| 1473|Caenorhabditis elegans AGRin (synaptic
protein) homologfamily member protein.
Length = 1473
Score = 43.2 bits (97), Expect = 1e-04
Identities = 18/56 (32%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Frame = +3
Query: 363 KVHCSAGRVCEINEHGEAICNCIKECP-YETDSRRKVCTNFNETWSSDCEVYRQRC 527
K C C + E+ +A C C +CP YE + ++VC T+SS+C + + C
Sbjct: 523 KEKCDFYSACVVGENEKAECKCPDDCPSYEMEEGKEVCGTDGVTYSSECHMKKSAC 578
Score = 40.3 bits (90), Expect = 0.001
Identities = 18/58 (31%), Positives = 26/58 (44%)
Frame = +3
Query: 354 PCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 527
PC K+ C C + A C C C D R VC ET+ ++CE+ ++ C
Sbjct: 377 PCEKMECGFWGSCVVKPDRTAECECPNRCE---DVMRPVCATNGETFDNECEMKKKSC 431
Score = 32.7 bits (71), Expect = 0.18
Identities = 15/59 (25%), Positives = 26/59 (44%)
Frame = +3
Query: 351 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 527
DPC C G+ C++ C C ++C T + VC +T+ ++C + C
Sbjct: 302 DPCHGHKCPNGQTCQLGVDRRPECKCSEQC---TMNSAHVCGTDGKTYLNECFLKLAAC 357
Score = 30.3 bits (65), Expect = 0.97
Identities = 15/53 (28%), Positives = 28/53 (52%)
Frame = +3
Query: 372 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRCL 530
C +VC + + G+ C CP TD ++VC + +T+S++C + C+
Sbjct: 456 CKKPQVCVVVD-GKPKC----VCPSCTDEFKEVCGSDGKTYSNECRLQNAACM 503
Score = 29.1 bits (62), Expect = 2.2
Identities = 14/59 (23%), Positives = 20/59 (33%)
Frame = +3
Query: 351 DPCMKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCEVYRQRC 527
D C+ V C G C +C C CP ++C + S C + C
Sbjct: 593 DECLHVQCRYGEECR-----SGVCVCSYNCPANPPLSARICGENGVLYPSLCHLQLASC 646
>AF106582-7|ABD94096.1| 806|Caenorhabditis elegans Hypothetical
protein W05F2.4b protein.
Length = 806
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 370 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTS 483
T APA + S S K A++S ++ KPT+ + ++TS
Sbjct: 96 TTAPAAKIASASDSKKPASSSSTISVKPTVRQKTSETS 133
>AF106582-6|ABD94095.1| 834|Caenorhabditis elegans Hypothetical
protein W05F2.4a protein.
Length = 834
Score = 32.7 bits (71), Expect = 0.18
Identities = 14/38 (36%), Positives = 23/38 (60%)
Frame = +1
Query: 370 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTS 483
T APA + S S K A++S ++ KPT+ + ++TS
Sbjct: 124 TTAPAAKIASASDSKKPASSSSTISVKPTVRQKTSETS 161
>U55364-2|AAN84822.2| 317|Caenorhabditis elegans Hypothetical
protein F21C10.9 protein.
Length = 317
Score = 30.7 bits (66), Expect = 0.74
Identities = 13/34 (38%), Positives = 23/34 (67%)
Frame = +2
Query: 428 HQGVSIRNRL*AQGVHKLQRDLVIGLRGVPTALP 529
++G I + + AQ + ++++DLV+GLRGV P
Sbjct: 85 YRGKGIGSMIWAQAMSRIRKDLVLGLRGVVKMAP 118
>U64833-11|AAB04822.2| 615|Caenorhabditis elegans Hypothetical
protein B0507.1 protein.
Length = 615
Score = 29.9 bits (64), Expect = 1.3
Identities = 12/46 (26%), Positives = 15/46 (32%)
Frame = +3
Query: 372 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSDCE 509
CS G C G +C C + Y S K C C+
Sbjct: 215 CSGGAACICGARGNCMCECATDFGYTLASDGKTCQRVRRRLKEKCK 260
>Z93395-2|CAB07705.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 372 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNET--WSSDCEVYRQRC---LCL 536
C G E + HG + C K CP T+ +C + ++T S+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 537 DHSELC 554
+ S C
Sbjct: 445 EESLKC 450
>Z83112-5|CAB05541.1| 905|Caenorhabditis elegans Hypothetical
protein ZC101.1 protein.
Length = 905
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 5/66 (7%)
Frame = +3
Query: 372 CSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNET--WSSDCEVYRQRC---LCL 536
C G E + HG + C K CP T+ +C + ++T S+C + +C C+
Sbjct: 385 CQDGSEPEFSLHGSSYCWSNKVCPAMTECVAGLCCSISKTRKRQSECLEGQFKCGTGQCI 444
Query: 537 DHSELC 554
+ S C
Sbjct: 445 EESLKC 450
>Z81125-10|CAB03385.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +3
Query: 357 CMKVHCSAGRVCEIN-EHGEAICNCIKECPYETDSRRKVCTNFNE-TWSSDCEVYR--QR 524
C C+A + + G+ +CN I ECP + + C E T+S D +
Sbjct: 1224 CEPCGCNAAGTDPLQCKDGQCLCNEIGECPCKKNVHGTKCDQCGEGTFSLDSSNLKGCTE 1283
Query: 525 CLCLDHSELC 554
C C + + C
Sbjct: 1284 CFCFNRTSNC 1293
>U88315-17|AAK68238.1| 132|Caenorhabditis elegans Hypothetical
protein C37H5.13b protein.
Length = 132
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -1
Query: 520 CRYTSQSDDQVSLKFVHTLRLESVSYGHSLMQLQIASPCSLISQTRPALQCTFMHGSSRL 341
CR + +F+ RLES++ G+ + +SP S + T P +Q F H +
Sbjct: 5 CRTARHFVKSTARRFIEQKRLESLTTGNGM-----SSPSSTHANTAPVVQSHFAHRPQHV 59
Query: 340 ISLSGASRD 314
S S +
Sbjct: 60 SSAPSRSME 68
>U88315-16|AAK68237.1| 414|Caenorhabditis elegans Hypothetical
protein C37H5.13a protein.
Length = 414
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/69 (26%), Positives = 30/69 (43%)
Frame = -1
Query: 520 CRYTSQSDDQVSLKFVHTLRLESVSYGHSLMQLQIASPCSLISQTRPALQCTFMHGSSRL 341
CR + +F+ RLES++ G+ + +SP S + T P +Q F H +
Sbjct: 5 CRTARHFVKSTARRFIEQKRLESLTTGNGM-----SSPSSTHANTAPVVQSHFAHRPQHV 59
Query: 340 ISLSGASRD 314
S S +
Sbjct: 60 SSAPSRSME 68
>AL008585-1|CAA15432.3| 3102|Caenorhabditis elegans Hypothetical
protein T22A3.8 protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +3
Query: 357 CMKVHCSAGRVCEIN-EHGEAICNCIKECPYETDSRRKVCTNFNE-TWSSDCEVYR--QR 524
C C+A + + G+ +CN I ECP + + C E T+S D +
Sbjct: 1224 CEPCGCNAAGTDPLQCKDGQCLCNEIGECPCKKNVHGTKCDQCGEGTFSLDSSNLKGCTE 1283
Query: 525 CLCLDHSELC 554
C C + + C
Sbjct: 1284 CFCFNRTSNC 1293
>AF074902-1|AAC26793.1| 3102|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3102
Score = 28.7 bits (61), Expect = 3.0
Identities = 18/70 (25%), Positives = 29/70 (41%), Gaps = 4/70 (5%)
Frame = +3
Query: 357 CMKVHCSAGRVCEIN-EHGEAICNCIKECPYETDSRRKVCTNFNE-TWSSDCEVYR--QR 524
C C+A + + G+ +CN I ECP + + C E T+S D +
Sbjct: 1224 CEPCGCNAAGTDPLQCKDGQCLCNEIGECPCKKNVHGTKCDQCGEGTFSLDSSNLKGCTE 1283
Query: 525 CLCLDHSELC 554
C C + + C
Sbjct: 1284 CFCFNRTSNC 1293
>U40187-2|AAA81159.1| 282|Caenorhabditis elegans Collagen protein 8
protein.
Length = 282
Score = 28.3 bits (60), Expect = 3.9
Identities = 11/24 (45%), Positives = 13/24 (54%)
Frame = +2
Query: 23 WQEFLQNHAYKPGGQDEEAVSVDP 94
WQ + H Y PGG DEE + P
Sbjct: 41 WQRIVTKHTY-PGGVDEETIESHP 63
>Z92831-4|CAJ58497.1| 447|Caenorhabditis elegans Hypothetical
protein F22G12.7 protein.
Length = 447
Score = 27.9 bits (59), Expect = 5.2
Identities = 14/53 (26%), Positives = 28/53 (52%)
Frame = +3
Query: 219 ESEHLENGMAESLDERRFQEAERARVSEILNESRDAPDNEINLDDPCMKVHCS 377
E EHLEN + +S + R ++E A +SE+ + + + + +++ CS
Sbjct: 48 EKEHLENSIKKSKNMR--NQSEEAYLSELKRQGLEKHAANVKHQETMLRMSCS 98
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 370 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 486
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 370 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 486
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 370 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 486
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 27.9 bits (59), Expect = 5.2
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = +1
Query: 370 TAAPAVSVRSTSTGKLSATASRSVHTKPTLGARCAQTST 486
T A A + +TS G S+ ASR +T+P + +++ T
Sbjct: 350 TGASASATSATSGGSASSDASRDKYTRPPIVLEASRSQT 388
>AF068721-5|AAC19259.1| 1475|Caenorhabditis elegans Holocentric
chromosome bindingprotein protein 1 protein.
Length = 1475
Score = 27.5 bits (58), Expect = 6.9
Identities = 23/84 (27%), Positives = 37/84 (44%), Gaps = 4/84 (4%)
Frame = +3
Query: 210 DISESEHLENGMAESLDERRFQEAERARVSEI---LNESRDAPDNEI-NLDDPCMKVHCS 377
+I +E NG+ +++ RF+ +RV E+ L E R EI +L++
Sbjct: 472 NIKNAEEKVNGLEAEVEKLRFEATNNSRVVELEQQLEEFRSLMIKEISDLENQLEAAKLE 531
Query: 378 AGRVCEINEHGEAICNCIKECPYE 449
+G E N EA I+E E
Sbjct: 532 SGSTSEPNAQLEASQATIQELTSE 555
>Z82265-3|CAB05173.1| 471|Caenorhabditis elegans Hypothetical
protein F02H6.5 protein.
Length = 471
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 6/41 (14%)
Frame = +2
Query: 176 GAADVGGAS------PRGHLRVGAPRERHGGEPGRETIPGG 280
GA +G AS PRG + + PRE H +PG + GG
Sbjct: 20 GAGGLGAASKFARKLPRGSVGIIEPREDHYYQPGFTLVGGG 60
>U53338-5|AAA96193.1| 463|Caenorhabditis elegans Hypothetical
protein C05E11.7 protein.
Length = 463
Score = 27.1 bits (57), Expect = 9.1
Identities = 15/48 (31%), Positives = 25/48 (52%)
Frame = +3
Query: 360 MKVHCSAGRVCEINEHGEAICNCIKECPYETDSRRKVCTNFNETWSSD 503
+ + S G + NE+G+ + +C KEC +SR +C TW S+
Sbjct: 119 LSLPASTGCQLDDNEYGKQVISCKKEC----NSRGLIC--MMRTWISE 160
>U42839-7|AAC69012.1| 1722|Caenorhabditis elegans Drosophila crumbs
homolog protein 1 protein.
Length = 1722
Score = 27.1 bits (57), Expect = 9.1
Identities = 13/50 (26%), Positives = 18/50 (36%)
Frame = +3
Query: 279 AERARVSEILNESRDAPDNEINLDDPCMKVHCSAGRVCEINEHGEAICNC 428
A + E N S N C + C G C+++ GE C C
Sbjct: 343 ATTCQCPEGFNGSNCEISNSYRSHPTCSDIRCLNGGSCKLDAEGEPFCVC 392
>U39850-1|AAA81055.3| 618|Caenorhabditis elegans Hypothetical
protein F52C9.5 protein.
Length = 618
Score = 27.1 bits (57), Expect = 9.1
Identities = 12/32 (37%), Positives = 17/32 (53%)
Frame = +3
Query: 435 ECPYETDSRRKVCTNFNETWSSDCEVYRQRCL 530
EC +RRK+C NFN+ DC + C+
Sbjct: 485 ECQDGKQTRRKICANFNQI--EDCAEEVRDCV 514
>U21319-1|AAC46673.2| 258|Caenorhabditis elegans Hypothetical
protein C30G12.4 protein.
Length = 258
Score = 27.1 bits (57), Expect = 9.1
Identities = 16/50 (32%), Positives = 25/50 (50%)
Frame = -1
Query: 367 TFMHGSSRLISLSGASRDSFRISETRALSASWNRLSSRLSAMPFSRCSDS 218
T++H S+ +S GASR+S AL + N + +S RC D+
Sbjct: 6 TYIHTSAVRLSALGASRESTFFKSRTALIHTVNVANFHVSRQNCRRCLDA 55
>AF039040-5|AAB94181.2| 472|Caenorhabditis elegans Hypothetical
protein T22B11.1 protein.
Length = 472
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/38 (36%), Positives = 22/38 (57%)
Frame = +3
Query: 240 GMAESLDERRFQEAERARVSEILNESRDAPDNEINLDD 353
G +E +DE ++ ARVSEI + ++ + NLDD
Sbjct: 105 GYSEQIDEFLLNPSQFARVSEIWQDVQNTKNFIENLDD 142
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,140,552
Number of Sequences: 27780
Number of extensions: 258283
Number of successful extensions: 1169
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 1021
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1158
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1134321766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -