Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_O21
(559 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc sup... 190 6e-49
L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide dism... 190 6e-49
AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxi... 190 6e-49
AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxi... 190 6e-49
U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide... 178 2e-45
AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide di... 163 6e-41
Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical pr... 162 1e-40
AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein. 162 1e-40
Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical pr... 40 0.001
U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in bl... 29 1.7
Z81070-9|CAB03002.1| 132|Caenorhabditis elegans Hypothetical pr... 29 3.0
AF016435-5|AAB65881.1| 538|Caenorhabditis elegans Hypothetical ... 27 9.1
>X77020-1|CAA54318.1| 158|Caenorhabditis elegans copper/zinc
superoxide dismutase protein.
Length = 158
Score = 190 bits (463), Expect = 6e-49
Identities = 89/156 (57%), Positives = 115/156 (73%), Gaps = 4/156 (2%)
Frame = +3
Query: 18 MPAKAVCVLHGD-VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSA 194
M +AV VL G+ V+GT++ QK E+ V+ GE+KGL+ G HGFHVH++GD+TNGC SA
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 60
Query: 195 GAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVV 374
G HFNP + HG P S+ RH+GDLGN+EA +D GV K+ + D+ ++L GPN++VGR++VV
Sbjct: 61 GPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMVV 119
Query: 375 HADPDDLGLG---GHELSKSTGNAGARIACGVIGLA 473
HA DDLG G E SK TGNAGAR ACGVI LA
Sbjct: 120 HAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>L20135-1|AAA28147.1| 158|Caenorhabditis elegans superoxide
dismutase protein.
Length = 158
Score = 190 bits (463), Expect = 6e-49
Identities = 89/156 (57%), Positives = 115/156 (73%), Gaps = 4/156 (2%)
Frame = +3
Query: 18 MPAKAVCVLHGD-VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSA 194
M +AV VL G+ V+GT++ QK E+ V+ GE+KGL+ G HGFHVH++GD+TNGC SA
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 60
Query: 195 GAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVV 374
G HFNP + HG P S+ RH+GDLGN+EA +D GV K+ + D+ ++L GPN++VGR++VV
Sbjct: 61 GPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMVV 119
Query: 375 HADPDDLGLG---GHELSKSTGNAGARIACGVIGLA 473
HA DDLG G E SK TGNAGAR ACGVI LA
Sbjct: 120 HAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>AC006608-8|AAV34795.1| 158|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform b protein.
Length = 158
Score = 190 bits (463), Expect = 6e-49
Identities = 89/156 (57%), Positives = 115/156 (73%), Gaps = 4/156 (2%)
Frame = +3
Query: 18 MPAKAVCVLHGD-VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSA 194
M +AV VL G+ V+GT++ QK E+ V+ GE+KGL+ G HGFHVH++GD+TNGC SA
Sbjct: 1 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 60
Query: 195 GAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVV 374
G HFNP + HG P S+ RH+GDLGN+EA +D GV K+ + D+ ++L GPN++VGR++VV
Sbjct: 61 GPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMVV 119
Query: 375 HADPDDLGLG---GHELSKSTGNAGARIACGVIGLA 473
HA DDLG G E SK TGNAGAR ACGVI LA
Sbjct: 120 HAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 155
>AC006608-7|AAF39759.1| 180|Caenorhabditis elegans Sod (superoxide
dismutase) protein1, isoform a protein.
Length = 180
Score = 190 bits (463), Expect = 6e-49
Identities = 89/156 (57%), Positives = 115/156 (73%), Gaps = 4/156 (2%)
Frame = +3
Query: 18 MPAKAVCVLHGD-VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSA 194
M +AV VL G+ V+GT++ QK E+ V+ GE+KGL+ G HGFHVH++GD+TNGC SA
Sbjct: 23 MSNRAVAVLRGETVTGTIWITQKSENDQAVIEGEIKGLTPGLHGFHVHQYGDSTNGCISA 82
Query: 195 GAHFNPLKQEHGAPDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVV 374
G HFNP + HG P S+ RH+GDLGN+EA +D GV K+ + D+ ++L GPN++VGR++VV
Sbjct: 83 GPHFNPFGKTHGGPKSEIRHVGDLGNVEAGAD-GVAKIKLTDTLVTLYGPNTVVGRSMVV 141
Query: 375 HADPDDLGLG---GHELSKSTGNAGARIACGVIGLA 473
HA DDLG G E SK TGNAGAR ACGVI LA
Sbjct: 142 HAGQDDLGEGVGDKAEESKKTGNAGARAACGVIALA 177
>U42833-3|AAA83577.1| 178|Caenorhabditis elegans Sod (superoxide
dismutase) protein5 protein.
Length = 178
Score = 178 bits (434), Expect = 2e-45
Identities = 87/153 (56%), Positives = 105/153 (68%), Gaps = 4/153 (2%)
Frame = +3
Query: 27 KAVCVLHGD-VSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAH 203
+AV VL G V GTV+ QK E GE+KGLS G HGFH+H++GD+T+GCTSAG H
Sbjct: 24 RAVAVLRGTAVFGTVWLTQKAEGEETEFEGEIKGLSPGLHGFHIHQYGDSTDGCTSAGPH 83
Query: 204 FNPLKQEHGAPDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHAD 383
FNP K HG DS RH+GDLGN+EA +D GV K+ D +SL G N+++GR++VVH D
Sbjct: 84 FNPCKMNHGGRDSVVRHVGDLGNVEAGAD-GVAKIKFSDKVVSLFGANTVIGRSMVVHVD 142
Query: 384 PDDLGLG---GHELSKSTGNAGARIACGVIGLA 473
DDLG G E S TGNAGAR ACGVI LA
Sbjct: 143 RDDLGQGIDDKAEESLKTGNAGARAACGVIALA 175
>AB190513-1|BAD51397.1| 221|Caenorhabditis elegans superoxide
dismutase protein.
Length = 221
Score = 163 bits (397), Expect = 6e-41
Identities = 76/142 (53%), Positives = 99/142 (69%)
Frame = +3
Query: 51 DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFNPLKQEHG 230
++ GT+ FDQ S + ++G V GL+ GKHGFH+HE GD NGC SAG H+NP K HG
Sbjct: 39 ELIGTIDFDQS--GSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHG 96
Query: 231 APDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHADPDDLGLGGH 410
APD RHIGDLGNIE+ + G T + + DS SL G SI+GR++V+H DDLG G
Sbjct: 97 APDDSNRHIGDLGNIESPASGD-TLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTS 155
Query: 411 ELSKSTGNAGARIACGVIGLAK 476
+ SK+TGNAG+R+ACG IG+ +
Sbjct: 156 DQSKTTGNAGSRLACGTIGIVE 177
>Z27080-4|CAB61015.1| 176|Caenorhabditis elegans Hypothetical
protein F55H2.1 protein.
Length = 176
Score = 162 bits (394), Expect = 1e-40
Identities = 76/139 (54%), Positives = 97/139 (69%)
Frame = +3
Query: 51 DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFNPLKQEHG 230
++ GT+ FDQ S + ++G V GL+ GKHGFH+HE GD NGC SAG H+NP K HG
Sbjct: 39 ELIGTIDFDQS--GSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHG 96
Query: 231 APDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHADPDDLGLGGH 410
APD RHIGDLGNIE+ + G T + + DS SL G SI+GR++V+H DDLG G
Sbjct: 97 APDDSNRHIGDLGNIESPASGD-TLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTS 155
Query: 411 ELSKSTGNAGARIACGVIG 467
+ SK+TGNAG+R+ACG IG
Sbjct: 156 DQSKTTGNAGSRLACGTIG 174
>AB003924-1|BAA28262.1| 176|Caenorhabditis elegans SOD4-1 protein.
Length = 176
Score = 162 bits (394), Expect = 1e-40
Identities = 76/139 (54%), Positives = 97/139 (69%)
Frame = +3
Query: 51 DVSGTVFFDQKDESSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFNPLKQEHG 230
++ GT+ FDQ S + ++G V GL+ GKHGFH+HE GD NGC SAG H+NP K HG
Sbjct: 39 ELIGTIDFDQS--GSFLKLNGSVSGLAAGKHGFHIHEKGDTGNGCLSAGGHYNPHKLSHG 96
Query: 231 APDSDTRHIGDLGNIEASSDGGVTKVCIQDSQISLVGPNSIVGRTLVVHADPDDLGLGGH 410
APD RHIGDLGNIE+ + G T + + DS SL G SI+GR++V+H DDLG G
Sbjct: 97 APDDSNRHIGDLGNIESPASGD-TLISVSDSLASLSGQYSIIGRSVVIHEKTDDLGRGTS 155
Query: 411 ELSKSTGNAGARIACGVIG 467
+ SK+TGNAG+R+ACG IG
Sbjct: 156 DQSKTTGNAGSRLACGTIG 174
>Z81110-6|CAB03260.2| 1011|Caenorhabditis elegans Hypothetical protein
T01D3.3b protein.
Length = 1011
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 90 SSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFN 209
S+ + + GEV L G+H +H+FGD++ GC+ GA F+
Sbjct: 906 STALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAPFS 945
>Z81110-2|CAB03259.1| 802|Caenorhabditis elegans Hypothetical
protein T01D3.3a protein.
Length = 802
Score = 39.9 bits (89), Expect = 0.001
Identities = 16/40 (40%), Positives = 26/40 (65%)
Frame = +3
Query: 90 SSPVVVSGEVKGLSKGKHGFHVHEFGDNTNGCTSAGAHFN 209
S+ + + GEV L G+H +H+FGD++ GC+ GA F+
Sbjct: 697 STALRIHGEVYTLPVGRHAVVLHQFGDSSEGCSRVGAPFS 736
>U51997-1|AAG24067.1| 572|Caenorhabditis elegans Activated in
blocked unfolded proteinresponse protein 2 protein.
Length = 572
Score = 29.5 bits (63), Expect = 1.7
Identities = 15/50 (30%), Positives = 28/50 (56%)
Frame = -2
Query: 456 RRQYGLQHCL*TCSIRDLQVRDHQDPHGLPKCVQQCCWVQLTRSESPECK 307
++QY +Q C+ C++ + Q Q +P+C QQC Q + +P+C+
Sbjct: 309 KQQYPVQQCIQPCTV-ECQTACQQ---AVPQCQQQCA-PQCYQPSAPQCQ 353
>Z81070-9|CAB03002.1| 132|Caenorhabditis elegans Hypothetical
protein F26E4.9 protein.
Length = 132
Score = 28.7 bits (61), Expect = 3.0
Identities = 14/45 (31%), Positives = 20/45 (44%)
Frame = +3
Query: 297 VTKVCIQDSQISLVGPNSIVGRTLVVHADPDDLGLGGHELSKSTG 431
+ K + LV P ++ RTL A P+D G L +TG
Sbjct: 4 LAKTAVAALSKKLVAPAAVARRTLATEASPEDYGYYPDPLEHATG 48
>AF016435-5|AAB65881.1| 538|Caenorhabditis elegans Hypothetical
protein F59D6.6 protein.
Length = 538
Score = 27.1 bits (57), Expect = 9.1
Identities = 14/39 (35%), Positives = 22/39 (56%)
Frame = -3
Query: 356 NNAVGSN*RDLRVLNANLSNTTITGSFNIS*VSNVTSIR 240
N+ S ++ LN+ L + IT FNI +SN+ +IR
Sbjct: 199 NSNTISQYKNCTTLNSGLKLSNITKDFNIPALSNINAIR 237
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,005,015
Number of Sequences: 27780
Number of extensions: 276824
Number of successful extensions: 619
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 592
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 606
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1144922904
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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