Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_O16
         (454 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.               23   1.2  
AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic ac...    23   1.2  
AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter...    23   2.1  
AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter...    23   2.1  
S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating...    21   4.7  
DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 vari...    21   4.7  
DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 vari...    21   4.7  

>S78458-1|AAB34402.1|   46|Apis mellifera apamin protein.
          Length = 46

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 7/14 (50%), Positives = 12/14 (85%)
 Frame = +1

Query: 1  CSYLFLSVVIVSQF 42
          C YLFLSV++++ +
Sbjct: 7  CIYLFLSVILITSY 20


>AY540846-1|AAS48080.1|  541|Apis mellifera neuronal nicotinic
           acetylcholine receptorApisa2 subunit protein.
          Length = 541

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/22 (36%), Positives = 12/22 (54%)
 Frame = +1

Query: 385 DMLHHEFVQAMNGFNKTTKHNK 450
           D   H+ +   NG + TT HN+
Sbjct: 395 DSARHQRIGGCNGLHTTTAHNR 416


>AY395072-1|AAQ96728.1|  593|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 593

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 451 PCCVWWFC*SRSSPA 407
           PCC W  C + ++PA
Sbjct: 487 PCCWWKICWTITTPA 501


>AY395071-1|AAQ96727.1|  646|Apis mellifera GABA neurotransmitter
           transporter-1B protein.
          Length = 646

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = -1

Query: 451 PCCVWWFC*SRSSPA 407
           PCC W  C + ++PA
Sbjct: 540 PCCWWKICWTITTPA 554


>S78459-1|AAB34403.1|   50|Apis mellifera mast cell-degranulating
          peptide protein.
          Length = 50

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 5/14 (35%), Positives = 12/14 (85%)
 Frame = +1

Query: 1  CSYLFLSVVIVSQF 42
          C++ FLSV++++ +
Sbjct: 7  CTFFFLSVILITSY 20


>DQ384991-1|ABD51779.1|   94|Apis mellifera allergen Api m 6 variant
           2 precursor protein.
          Length = 94

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 177 GDCRSSLLLRSCEGRVEHF 233
           G C S+ +   C+GR + F
Sbjct: 35  GKCPSNEIFSRCDGRCQRF 53


>DQ384990-1|ABD51778.1|   92|Apis mellifera allergen Api m 6 variant
           1 precursor protein.
          Length = 92

 Score = 21.4 bits (43), Expect = 4.7
 Identities = 7/19 (36%), Positives = 11/19 (57%)
 Frame = +3

Query: 177 GDCRSSLLLRSCEGRVEHF 233
           G C S+ +   C+GR + F
Sbjct: 35  GKCPSNEIFSRCDGRCQRF 53


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 115,433
Number of Sequences: 438
Number of extensions: 2480
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)