Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_O14
         (305 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   3.4  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              21   3.4  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   3.4  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   3.4  
DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor pro...    21   4.5  

>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 8/18 (44%), Positives = 12/18 (66%)
 Frame = -1

Query: 167 PSNLRLIEEQSSFLKKNS 114
           P  +  ++E S FLKKN+
Sbjct: 274 PHRIPQLQEVSEFLKKNT 291


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 10/22 (45%), Positives = 13/22 (59%)
 Frame = -2

Query: 121  KILVQNKPLLLYVRWRRPPKPN 56
            K LV +   +L V WR P +PN
Sbjct: 1187 KALVMSSESIL-VSWRPPSQPN 1207


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 115  LVQNKPLLLYVRWRRPPKPN 56
            +V + P  L++ W  P +PN
Sbjct: 1222 VVVSSPQALFISWLPPLEPN 1241


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 3.4
 Identities = 7/20 (35%), Positives = 12/20 (60%)
 Frame = -2

Query: 115  LVQNKPLLLYVRWRRPPKPN 56
            +V + P  L++ W  P +PN
Sbjct: 1218 VVVSSPQALFISWLPPLEPN 1237


>DQ151547-1|ABA39280.1|  405|Apis mellifera tyramine receptor
           protein.
          Length = 405

 Score = 20.6 bits (41), Expect = 4.5
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = +1

Query: 190 SFFCTQRIMLYIY 228
           SFF    +MLY+Y
Sbjct: 206 SFFLPMLVMLYVY 218


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,094
Number of Sequences: 438
Number of extensions: 1622
Number of successful extensions: 7
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 49
effective length of database: 124,881
effective search space used:  6493812
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)