Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_O13
         (403 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U13660-1|AAA57007.1|  501|Homo sapiens cartilage-derived morphog...    35   0.088
BC150246-1|AAI50247.1| 1563|Homo sapiens WDFY3 protein protein.        31   1.4  
AF538685-1|AAN15137.1| 3526|Homo sapiens ALFY protein.                 31   1.4  
AC095046-1|AAY40903.1| 2407|Homo sapiens unknown protein.              31   1.4  
AB023210-1|BAA76837.2| 1556|Homo sapiens KIAA0993 protein protein.     31   1.4  
X80915-1|CAA56874.1|  501|Homo sapiens Gdf5 protein.                   29   5.8  
BC032495-1|AAH32495.1|  501|Homo sapiens GDF5 protein protein.         29   5.8  
AL121586-3|CAB89416.1|  501|Homo sapiens growth differentiation ...    29   5.8  

>U13660-1|AAA57007.1|  501|Homo sapiens cartilage-derived
           morphogenetic protein 1 precursor protein.
          Length = 501

 Score = 35.1 bits (77), Expect = 0.088
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 2/69 (2%)
 Frame = -2

Query: 291 LFSVSIRLLRRQCS--SKPAVEDERASAQCVVRRIPDERERQACLCTK*FSLY*HLLYDV 118
           L    +R+LR++ S  +KPAV   R +AQ  +   P  R+  A L  +         ++V
Sbjct: 234 LLGAELRILRKKPSDTAKPAVPRSRRAAQLKLSSCPSGRQPAALLDVRSVPGLDGSGWEV 293

Query: 117 FNIWKILKN 91
           F+IWK+ +N
Sbjct: 294 FDIWKLFRN 302


>BC150246-1|AAI50247.1| 1563|Homo sapiens WDFY3 protein protein.
          Length = 1563

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 149 NHLVQRQACLSRSSGIRRTTHWALARSSSTAGL-ELHCLRNRRMET 283
           NHL   + C+SR   +  TT   L+R SS  GL +L   R  R E+
Sbjct: 287 NHLAHEKKCISRGEALAPTTQSKLSRVSSGFGLSKLTGSRRNRKES 332


>AF538685-1|AAN15137.1| 3526|Homo sapiens ALFY protein.
          Length = 3526

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 149  NHLVQRQACLSRSSGIRRTTHWALARSSSTAGL-ELHCLRNRRMET 283
            NHL   + C+SR   +  TT   L+R SS  GL +L   R  R E+
Sbjct: 2250 NHLAHEKKCISRGEALAPTTQSKLSRVSSGFGLSKLTGSRRNRKES 2295


>AC095046-1|AAY40903.1| 2407|Homo sapiens unknown protein.
          Length = 2407

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 149  NHLVQRQACLSRSSGIRRTTHWALARSSSTAGL-ELHCLRNRRMET 283
            NHL   + C+SR   +  TT   L+R SS  GL +L   R  R E+
Sbjct: 2250 NHLAHEKKCISRGEALAPTTQSKLSRVSSGFGLSKLTGSRRNRKES 2295


>AB023210-1|BAA76837.2| 1556|Homo sapiens KIAA0993 protein protein.
          Length = 1556

 Score = 31.1 bits (67), Expect = 1.4
 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
 Frame = +2

Query: 149 NHLVQRQACLSRSSGIRRTTHWALARSSSTAGL-ELHCLRNRRMET 283
           NHL   + C+SR   +  TT   L+R SS  GL +L   R  R E+
Sbjct: 280 NHLAHEKKCISRGEALAPTTQSKLSRVSSGFGLSKLTGSRRNRKES 325


>X80915-1|CAA56874.1|  501|Homo sapiens Gdf5 protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = -2

Query: 291 LFSVSIRLLRRQCS--SKPAVEDERASAQCVVRRIPDERERQACLCTK*FSLY*HLLYDV 118
           L    +R+LR++ S  +KPA      +AQ  +   P  R+  + L  +         ++V
Sbjct: 234 LLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPASLLDVRSVPGLDGSGWEV 293

Query: 117 FNIWKILKN 91
           F+IWK+ +N
Sbjct: 294 FDIWKLFRN 302


>BC032495-1|AAH32495.1|  501|Homo sapiens GDF5 protein protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = -2

Query: 291 LFSVSIRLLRRQCS--SKPAVEDERASAQCVVRRIPDERERQACLCTK*FSLY*HLLYDV 118
           L    +R+LR++ S  +KPA      +AQ  +   P  R+  + L  +         ++V
Sbjct: 234 LLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPASLLDVRSVPGLDGSGWEV 293

Query: 117 FNIWKILKN 91
           F+IWK+ +N
Sbjct: 294 FDIWKLFRN 302


>AL121586-3|CAB89416.1|  501|Homo sapiens growth differentiation
           factor 5 (cartilage-derived morphogenetic protein-1)
           protein.
          Length = 501

 Score = 29.1 bits (62), Expect = 5.8
 Identities = 19/69 (27%), Positives = 34/69 (49%), Gaps = 2/69 (2%)
 Frame = -2

Query: 291 LFSVSIRLLRRQCS--SKPAVEDERASAQCVVRRIPDERERQACLCTK*FSLY*HLLYDV 118
           L    +R+LR++ S  +KPA      +AQ  +   P  R+  + L  +         ++V
Sbjct: 234 LLGAELRILRKKPSDTAKPAAPGGGRAAQLKLSSCPSGRQPASLLDVRSVPGLDGSGWEV 293

Query: 117 FNIWKILKN 91
           F+IWK+ +N
Sbjct: 294 FDIWKLFRN 302


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 49,255,512
Number of Sequences: 237096
Number of extensions: 996937
Number of successful extensions: 1847
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1812
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1847
length of database: 76,859,062
effective HSP length: 82
effective length of database: 57,417,190
effective search space used: 2928276690
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)