Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_O13
         (403 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain, un...    31   0.23 
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr...    29   0.94 
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr...    29   0.94 
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr...    29   0.94 
Z37983-5|CAA86059.2|  405|Caenorhabditis elegans Hypothetical pr...    27   3.8  
Z83240-2|CAB05814.2|  360|Caenorhabditis elegans Hypothetical pr...    27   6.7  
Z78412-4|CAB01654.2|  211|Caenorhabditis elegans Hypothetical pr...    26   8.8  

>U80848-3|AAB37988.1| 2098|Caenorhabditis elegans Heavy chain,
            unconventional myosinprotein 6 protein.
          Length = 2098

 Score = 31.5 bits (68), Expect = 0.23
 Identities = 16/55 (29%), Positives = 29/55 (52%)
 Frame = +1

Query: 214  GTSSFVFNRRLRATLSTQQANGNREQPPNYLLTKQLDLQITKIQRALLVECIFVD 378
            G +   +++ +   L   Q NG R QPP+Y     ++LQ  K Q+ +++   F+D
Sbjct: 1132 GPAGTGYSKYIEDRLRRTQVNGTRHQPPSY-----VELQANKSQKPVVLAVTFMD 1181


>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical protein
            C37C3.6c protein.
          Length = 1487

 Score = 29.5 bits (63), Expect = 0.94
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -3

Query: 296  GGCSRFPFACCVDNVALSRRLKTNEL-VPSVWSGEYQ-TSERDRLAFAP 156
            GGC+   F CC D+V L+R         PS  +  Y    +R  +AF P
Sbjct: 854  GGCNETQFGCCHDDVTLARGANLEGCGEPSCAASLYGCCKDRKTIAFGP 902


>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical protein
            C37C3.6a protein.
          Length = 1558

 Score = 29.5 bits (63), Expect = 0.94
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -3

Query: 296  GGCSRFPFACCVDNVALSRRLKTNEL-VPSVWSGEYQ-TSERDRLAFAP 156
            GGC+   F CC D+V L+R         PS  +  Y    +R  +AF P
Sbjct: 854  GGCNETQFGCCHDDVTLARGANLEGCGEPSCAASLYGCCKDRKTIAFGP 902


>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical protein
            C37C3.6b protein.
          Length = 2167

 Score = 29.5 bits (63), Expect = 0.94
 Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 2/49 (4%)
 Frame = -3

Query: 296  GGCSRFPFACCVDNVALSRRLKTNEL-VPSVWSGEYQ-TSERDRLAFAP 156
            GGC+   F CC D+V L+R         PS  +  Y    +R  +AF P
Sbjct: 854  GGCNETQFGCCHDDVTLARGANLEGCGEPSCAASLYGCCKDRKTIAFGP 902


>Z37983-5|CAA86059.2|  405|Caenorhabditis elegans Hypothetical
           protein B0393.6 protein.
          Length = 405

 Score = 27.5 bits (58), Expect = 3.8
 Identities = 15/57 (26%), Positives = 30/57 (52%)
 Frame = +2

Query: 131 RCQYKLNHLVQRQACLSRSSGIRRTTHWALARSSSTAGLELHCLRNRRMETENSLQI 301
           R +YKL  +V  + C+S  +G  +  H++ A S S     +   R R++ T +++ +
Sbjct: 116 RTEYKLECIVCLECCVSSHNG-HKLNHFSPASSPSIESSPIVHHRARQLSTSSTVSV 171


>Z83240-2|CAB05814.2|  360|Caenorhabditis elegans Hypothetical
           protein T23H4.3 protein.
          Length = 360

 Score = 26.6 bits (56), Expect = 6.7
 Identities = 13/26 (50%), Positives = 15/26 (57%)
 Frame = -3

Query: 236 LKTNELVPSVWSGEYQTSERDRLAFA 159
           L  N L+P V SG Y T ERD +  A
Sbjct: 77  LDGNYLIPYVISGNYDTVERDTIKTA 102


>Z78412-4|CAB01654.2|  211|Caenorhabditis elegans Hypothetical
           protein M176.5 protein.
          Length = 211

 Score = 26.2 bits (55), Expect = 8.8
 Identities = 16/52 (30%), Positives = 25/52 (48%)
 Frame = +2

Query: 125 YKRCQYKLNHLVQRQACLSRSSGIRRTTHWALARSSSTAGLELHCLRNRRME 280
           Y RC  +L   +++  CLS    +R  +  + +R      LEL+ L  RR E
Sbjct: 34  YIRCMEQLE--IKQHECLSLDKNVRLRSSDSCSRLKWDKKLELNALHMRRAE 83


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,997,873
Number of Sequences: 27780
Number of extensions: 152493
Number of successful extensions: 384
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 378
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 384
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 630384202
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)