Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_O11
         (426 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D87957-1|BAA13508.1|  299|Homo sapiens protein ( Homo sapiens ge...   133   2e-31
BC007102-1|AAH07102.2|  285|Homo sapiens RQCD1 protein protein.       133   2e-31
D88259-1|BAB46919.1|  809|Homo sapiens cerebral protein-4 protein.     30   3.8  
BC128585-1|AAI28586.1|  809|Homo sapiens piggyBac transposable e...    30   3.8  
AL021997-3|CAD21704.2|  809|Homo sapiens piggyBac transposable e...    30   3.8  
AK223446-1|BAD97166.1|  809|Homo sapiens piggyBac transposable e...    30   3.8  

>D87957-1|BAA13508.1|  299|Homo sapiens protein ( Homo sapiens gene
           for protein involved in sexual development, complete
           cds. ).
          Length = 299

 Score =  133 bits (322), Expect = 2e-31
 Identities = 66/85 (77%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
 Frame = +1

Query: 175 SPSPAQ-ANVDREKIYTWILELCHPNTRENALLELSKKREVVPDSAIMLWHSFGTIAALL 351
           +P P   A VDREKIY WI EL  P TRENALLELSKKRE VPD A MLWHSFGTIAALL
Sbjct: 8   APVPTTLAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALL 67

Query: 352 QEITNIYVAMIPPTLTAHQSNRVCN 426
           QEI NIY ++ PPTLTAHQSNRVCN
Sbjct: 68  QEIVNIYPSINPPTLTAHQSNRVCN 92


>BC007102-1|AAH07102.2|  285|Homo sapiens RQCD1 protein protein.
          Length = 285

 Score =  133 bits (322), Expect = 2e-31
 Identities = 66/85 (77%), Positives = 69/85 (81%), Gaps = 1/85 (1%)
 Frame = +1

Query: 175 SPSPAQ-ANVDREKIYTWILELCHPNTRENALLELSKKREVVPDSAIMLWHSFGTIAALL 351
           +P P   A VDREKIY WI EL  P TRENALLELSKKRE VPD A MLWHSFGTIAALL
Sbjct: 35  APVPTTLAQVDREKIYQWINELSSPETRENALLELSKKRESVPDLAPMLWHSFGTIAALL 94

Query: 352 QEITNIYVAMIPPTLTAHQSNRVCN 426
           QEI NIY ++ PPTLTAHQSNRVCN
Sbjct: 95  QEIVNIYPSINPPTLTAHQSNRVCN 119


>D88259-1|BAB46919.1|  809|Homo sapiens cerebral protein-4 protein.
          Length = 809

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 67  IYENCVKSI-KRSSLISRCRVRILS*RWYFI 156
           +Y+ C + + K   +IS+ RVRI S +WY I
Sbjct: 731 VYDECKEGVAKMDQIISKYRVRIRSKKWYSI 761


>BC128585-1|AAI28586.1|  809|Homo sapiens piggyBac transposable
           element derived 1 protein.
          Length = 809

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 67  IYENCVKSI-KRSSLISRCRVRILS*RWYFI 156
           +Y+ C + + K   +IS+ RVRI S +WY I
Sbjct: 731 VYDECKEGVAKMDQIISKYRVRIRSKKWYSI 761


>AL021997-3|CAD21704.2|  809|Homo sapiens piggyBac transposable
           element derived 1 protein.
          Length = 809

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 67  IYENCVKSI-KRSSLISRCRVRILS*RWYFI 156
           +Y+ C + + K   +IS+ RVRI S +WY I
Sbjct: 731 VYDECKEGVAKMDQIISKYRVRIRSKKWYSI 761


>AK223446-1|BAD97166.1|  809|Homo sapiens piggyBac transposable
           element derived 1 variant protein.
          Length = 809

 Score = 29.9 bits (64), Expect = 3.8
 Identities = 13/31 (41%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
 Frame = +1

Query: 67  IYENCVKSI-KRSSLISRCRVRILS*RWYFI 156
           +Y+ C + + K   +IS+ RVRI S +WY I
Sbjct: 731 VYDECKEGVAKMDQIISKYRVRIRSKKWYSI 761


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,831,805
Number of Sequences: 237096
Number of extensions: 1250504
Number of successful extensions: 5777
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 5697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5777
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3316445452
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)