BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_O11
(426 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY118785-1|AAM50645.1| 304|Drosophila melanogaster GH15157p pro... 115 2e-26
AE014298-2901|AAG22357.1| 304|Drosophila melanogaster CG14213-P... 115 2e-26
AE014298-2900|AAF48991.1| 304|Drosophila melanogaster CG14213-P... 115 2e-26
AY075185-1|AAL68055.1| 290|Drosophila melanogaster AT13107p pro... 86 2e-17
AE014134-1599|AAF52741.1| 290|Drosophila melanogaster CG9573-PA... 86 2e-17
BT022983-1|AAY55399.1| 298|Drosophila melanogaster IP11148p pro... 71 9e-13
AE014297-4838|AAF57211.3| 298|Drosophila melanogaster CG2053-PA... 71 9e-13
BT004914-1|AAO49167.1| 291|Drosophila melanogaster GM01305p pro... 28 4.5
AE014297-1223|AAF54570.1| 291|Drosophila melanogaster CG4591-PA... 28 4.5
AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-P... 28 4.5
X03431-1|CAA27159.1| 414|Drosophila melanogaster protein ( Dros... 28 6.0
>AY118785-1|AAM50645.1| 304|Drosophila melanogaster GH15157p
protein.
Length = 304
Score = 115 bits (277), Expect = 2e-26
Identities = 55/79 (69%), Positives = 62/79 (78%)
Frame = +1
Query: 190 QANVDREKIYTWILELCHPNTRENALLELSKKREVVPDSAIMLWHSFGTIAALLQEITNI 369
Q ++EK+Y WI EL HP+TRE ALLELSKKRE D A MLW+SFGT ALLQEI NI
Sbjct: 21 QQQTEQEKVYQWINELAHPDTRETALLELSKKRET--DLAPMLWNSFGTACALLQEIVNI 78
Query: 370 YVAMIPPTLTAHQSNRVCN 426
Y ++ PPTLTAHQSNRVCN
Sbjct: 79 YPSITPPTLTAHQSNRVCN 97
>AE014298-2901|AAG22357.1| 304|Drosophila melanogaster CG14213-PB,
isoform B protein.
Length = 304
Score = 115 bits (277), Expect = 2e-26
Identities = 55/79 (69%), Positives = 62/79 (78%)
Frame = +1
Query: 190 QANVDREKIYTWILELCHPNTRENALLELSKKREVVPDSAIMLWHSFGTIAALLQEITNI 369
Q ++EK+Y WI EL HP+TRE ALLELSKKRE D A MLW+SFGT ALLQEI NI
Sbjct: 21 QQQTEQEKVYQWINELAHPDTRETALLELSKKRET--DLAPMLWNSFGTACALLQEIVNI 78
Query: 370 YVAMIPPTLTAHQSNRVCN 426
Y ++ PPTLTAHQSNRVCN
Sbjct: 79 YPSITPPTLTAHQSNRVCN 97
>AE014298-2900|AAF48991.1| 304|Drosophila melanogaster CG14213-PA,
isoform A protein.
Length = 304
Score = 115 bits (277), Expect = 2e-26
Identities = 55/79 (69%), Positives = 62/79 (78%)
Frame = +1
Query: 190 QANVDREKIYTWILELCHPNTRENALLELSKKREVVPDSAIMLWHSFGTIAALLQEITNI 369
Q ++EK+Y WI EL HP+TRE ALLELSKKRE D A MLW+SFGT ALLQEI NI
Sbjct: 21 QQQTEQEKVYQWINELAHPDTRETALLELSKKRET--DLAPMLWNSFGTACALLQEIVNI 78
Query: 370 YVAMIPPTLTAHQSNRVCN 426
Y ++ PPTLTAHQSNRVCN
Sbjct: 79 YPSITPPTLTAHQSNRVCN 97
>AY075185-1|AAL68055.1| 290|Drosophila melanogaster AT13107p
protein.
Length = 290
Score = 86.2 bits (204), Expect = 2e-17
Identities = 48/89 (53%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Frame = +1
Query: 166 MINSPSPA---QANVDREKIYTWILELCHPNTRENALLELSKKREVVPDSAIMLWHSFGT 336
M PSP Q +REK+Y I+EL +P TRE ALLELSK D A MLW S GT
Sbjct: 1 MSAEPSPVMSPQQQAEREKVYQLIIELAYPATRETALLELSKN--TYADLAPMLWKSVGT 58
Query: 337 IAALLQEITNIYVAMIPPTLTAHQSNRVC 423
LLQEI NIY + P L A+QSNRVC
Sbjct: 59 TCTLLQEIVNIYPIITTPVLKANQSNRVC 87
>AE014134-1599|AAF52741.1| 290|Drosophila melanogaster CG9573-PA
protein.
Length = 290
Score = 86.2 bits (204), Expect = 2e-17
Identities = 48/89 (53%), Positives = 54/89 (60%), Gaps = 3/89 (3%)
Frame = +1
Query: 166 MINSPSPA---QANVDREKIYTWILELCHPNTRENALLELSKKREVVPDSAIMLWHSFGT 336
M PSP Q +REK+Y I+EL +P TRE ALLELSK D A MLW S GT
Sbjct: 1 MSAEPSPVMSPQQQAEREKVYQLIIELAYPATRETALLELSKN--TYADLAPMLWKSVGT 58
Query: 337 IAALLQEITNIYVAMIPPTLTAHQSNRVC 423
LLQEI NIY + P L A+QSNRVC
Sbjct: 59 TCTLLQEIVNIYPIITTPVLKANQSNRVC 87
>BT022983-1|AAY55399.1| 298|Drosophila melanogaster IP11148p
protein.
Length = 298
Score = 70.5 bits (165), Expect = 9e-13
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +1
Query: 202 DREKIYTWILELCHPNTRENALLELSKKREVVPDSAIMLWHSFGTIAALLQEITNIYVAM 381
D + ++ WI LC+ TR A+LEL ++R + ++LWHSFG ++ LLQEI +IY A+
Sbjct: 13 DIDSVFGWIANLCNKETRLWAMLELFERRTHIDSLGLLLWHSFGAVSGLLQEIVSIYPAI 72
Query: 382 IPP-TLTAHQSNRVC 423
LT QS+R+C
Sbjct: 73 YQEIELTGQQSHRIC 87
>AE014297-4838|AAF57211.3| 298|Drosophila melanogaster CG2053-PA
protein.
Length = 298
Score = 70.5 bits (165), Expect = 9e-13
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 1/75 (1%)
Frame = +1
Query: 202 DREKIYTWILELCHPNTRENALLELSKKREVVPDSAIMLWHSFGTIAALLQEITNIYVAM 381
D + ++ WI LC+ TR A+LEL ++R + ++LWHSFG ++ LLQEI +IY A+
Sbjct: 13 DIDSVFGWIANLCNKETRLWAMLELFERRTHIDSLGLLLWHSFGAVSGLLQEIVSIYPAI 72
Query: 382 IPP-TLTAHQSNRVC 423
LT QS+R+C
Sbjct: 73 YQEIELTGQQSHRIC 87
>BT004914-1|AAO49167.1| 291|Drosophila melanogaster GM01305p
protein.
Length = 291
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -2
Query: 161 NFMKYHRHDKILTLHRDIND-ERFIDLTQ--FS*IYSINVNYENSSQN 27
+F++Y DKI+ +RD +D + FID Q F+ N Y++ S+N
Sbjct: 140 SFLEYQFTDKIIHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKN 187
>AE014297-1223|AAF54570.1| 291|Drosophila melanogaster CG4591-PA
protein.
Length = 291
Score = 28.3 bits (60), Expect = 4.5
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Frame = -2
Query: 161 NFMKYHRHDKILTLHRDIND-ERFIDLTQ--FS*IYSINVNYENSSQN 27
+F++Y DKI+ +RD +D + FID Q F+ N Y++ S+N
Sbjct: 140 SFLEYQFTDKIIHSYRDDSDLQNFIDFAQQEFNCCGLSNAGYQDWSKN 187
>AE013599-1457|AAF58528.2| 1977|Drosophila melanogaster CG13162-PA
protein.
Length = 1977
Score = 28.3 bits (60), Expect = 4.5
Identities = 13/41 (31%), Positives = 21/41 (51%)
Frame = +1
Query: 172 NSPSPAQANVDREKIYTWILELCHPNTRENALLELSKKREV 294
+ PSP + + ++ Y+ L HPNT L + K R+V
Sbjct: 431 SGPSPDEELIKLKRAYSVALNQLHPNTELTGSLLIQKYRQV 471
>X03431-1|CAA27159.1| 414|Drosophila melanogaster protein (
Drosophila melanogastertransposable element 297. ).
Length = 414
Score = 27.9 bits (59), Expect = 6.0
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 13/74 (17%)
Frame = -2
Query: 185 GLGELIIINFMKYHRHDKILTLHRDINDER-FIDLTQFS*IYSINVNYE----------- 42
G+ E I I K + H DI D R I + Q IY ++N+E
Sbjct: 148 GIKESIKILIRKLPIQLFTILAHHDITDLRSLITIAQNEGIYEEHINFEFYEKPEYRNKN 207
Query: 41 -NSSQNRKSRKYNT 3
NS+QN K++K+NT
Sbjct: 208 SNSNQNSKTQKFNT 221
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,463,406
Number of Sequences: 53049
Number of extensions: 400920
Number of successful extensions: 1032
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1027
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1313584398
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -