Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_O10
         (377 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC127116-1|AAI27117.1| 1757|Homo sapiens KIF13A protein protein.       29   5.0  
BC127115-1|AAI27116.1| 1770|Homo sapiens KIF13A protein protein.       29   5.0  
AY014404-1|AAG38891.1| 1770|Homo sapiens kinesin-like protein RB...    29   5.0  
AY014403-1|AAG38890.1| 1805|Homo sapiens kinesin-like protein RB...    29   5.0  
AL138724-3|CAI40948.1| 1768|Homo sapiens protein ( leoporin 153k...    29   5.0  
AL138724-2|CAI40947.1| 1803|Homo sapiens protein ( Human DNA seq...    29   5.0  
AL023807-2|CAI21671.1| 1768|Homo sapiens protein ( sin-like prot...    29   5.0  
AL023807-1|CAI21670.1| 1803|Homo sapiens protein ( Human DNA seq...    29   5.0  
AJ291579-1|CAC20443.1| 1749|Homo sapiens KINESIN-13A2 protein.         29   5.0  
AJ291578-1|CAC20442.1| 1757|Homo sapiens KINESIN-13A1 protein.         29   5.0  

>BC127116-1|AAI27117.1| 1757|Homo sapiens KIF13A protein protein.
          Length = 1757

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 50  SHKVSTLLITQTEYDVERGNA*NK 121
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>BC127115-1|AAI27116.1| 1770|Homo sapiens KIF13A protein protein.
          Length = 1770

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 50  SHKVSTLLITQTEYDVERGNA*NK 121
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AY014404-1|AAG38891.1| 1770|Homo sapiens kinesin-like protein
           RBKIN2 protein.
          Length = 1770

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 50  SHKVSTLLITQTEYDVERGNA*NK 121
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AY014403-1|AAG38890.1| 1805|Homo sapiens kinesin-like protein
           RBKIN1 protein.
          Length = 1805

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 50  SHKVSTLLITQTEYDVERGNA*NK 121
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AL138724-3|CAI40948.1| 1768|Homo sapiens protein ( leoporin 153kD,
           the 3' end of a).).
          Length = 1768

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 50  SHKVSTLLITQTEYDVERGNA*NK 121
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AL138724-2|CAI40947.1| 1803|Homo sapiens protein ( Human DNA
           sequence from clone RP11-500C11 on chromosome 6 Contains
            the 5' end of the NUP153 gene for nucleoporin 153kD,
           the 3' end of a).
          Length = 1803

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 50  SHKVSTLLITQTEYDVERGNA*NK 121
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AL023807-2|CAI21671.1| 1768|Homo sapiens protein ( sin-like protein
           (RBKIN)  ).).
          Length = 1768

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 50  SHKVSTLLITQTEYDVERGNA*NK 121
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AL023807-1|CAI21670.1| 1803|Homo sapiens protein ( Human DNA
           sequence from clone RP3-525L6 on chromosome 6p22.3-23
           Contains the 5' end of a gene for a kinesin-like protein
           (RBKIN)  ).
          Length = 1803

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 50  SHKVSTLLITQTEYDVERGNA*NK 121
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AJ291579-1|CAC20443.1| 1749|Homo sapiens KINESIN-13A2 protein.
          Length = 1749

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 50  SHKVSTLLITQTEYDVERGNA*NK 121
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


>AJ291578-1|CAC20442.1| 1757|Homo sapiens KINESIN-13A1 protein.
          Length = 1757

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = +2

Query: 50  SHKVSTLLITQTEYDVERGNA*NK 121
           SH V  ++ITQT YD++ GN+  K
Sbjct: 221 SHAVFNIIITQTLYDLQSGNSGEK 244


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 40,211,648
Number of Sequences: 237096
Number of extensions: 684612
Number of successful extensions: 4858
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4849
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4858
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2536788584
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)