Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_O09
         (266 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    23   0.65 
AY217747-1|AAP45005.1|  246|Apis mellifera short-chain dehydroge...    22   1.5  
AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex det...    20   6.1  

>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 23.0 bits (47), Expect = 0.65
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -3

Query: 162 DWERRRRGKSSRVGARVGVHRQRARGEFDSS 70
           DW R   G  SR+  R+  +R   RG+  SS
Sbjct: 24  DWFRISAGCVSRISNRISRNRVLLRGQCISS 54


>AY217747-1|AAP45005.1|  246|Apis mellifera short-chain
           dehydrogenase/reductase protein.
          Length = 246

 Score = 21.8 bits (44), Expect = 1.5
 Identities = 10/23 (43%), Positives = 11/23 (47%)
 Frame = +3

Query: 66  LETNRTRPALFAGALPLSHRLDC 134
           L  NR RPA  A    L+   DC
Sbjct: 152 LPMNRNRPAYLASKCALTTLTDC 174


>AY569694-1|AAS86647.1|  400|Apis mellifera complementary sex
           determiner protein.
          Length = 400

 Score = 19.8 bits (39), Expect = 6.1
 Identities = 8/23 (34%), Positives = 16/23 (69%)
 Frame = -3

Query: 156 ERRRRGKSSRVGARVGVHRQRAR 88
           E R+ GK+S+  +R  + R+R++
Sbjct: 277 EYRKYGKTSKERSRDRMERERSK 299


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 47,101
Number of Sequences: 438
Number of extensions: 472
Number of successful extensions: 3
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used:  5012760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)