Samia BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_O08
         (583 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-...    50   3e-05
UniRef50_Q88M74 Cluster: Acyltransferase; n=36; Proteobacteria|R...    33   3.7  
UniRef50_Q2AB84 Cluster: Bitter taste receptor; n=1; Monodelphis...    33   3.7  
UniRef50_Q6FV58 Cluster: Similarity; n=1; Candida glabrata|Rep: ...    33   6.5  

>UniRef50_Q6UV17 Cluster: Endonuclease and reverse transcriptase-like
            protein; n=25; Arthropoda|Rep: Endonuclease and reverse
            transcriptase-like protein - Bombyx mori (Silk moth)
          Length = 986

 Score = 50.4 bits (115), Expect = 3e-05
 Identities = 23/40 (57%), Positives = 27/40 (67%)
 Frame = +3

Query: 372  VYSHILEAK*SRTVRFQESFIP*TIRVWTELPVAVFPREY 491
            V+ + LE   S TVRFQ SF+P TIR+W ELP  VFP  Y
Sbjct: 915  VHPYYLEPLRSSTVRFQRSFLPRTIRLWNELPSTVFPERY 954


>UniRef50_Q88M74 Cluster: Acyltransferase; n=36; Proteobacteria|Rep:
           Acyltransferase - Pseudomonas putida (strain KT2440)
          Length = 661

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 3/38 (7%)
 Frame = +3

Query: 447 RVWTELPVAVFPREYQGIWGS--SKGA*KGFLKS-WQR 551
           R+  E PV V P   QG+WGS  S+   KGF K  W R
Sbjct: 593 RILEETPVPVIPLALQGLWGSFFSRDPAKGFFKRLWSR 630


>UniRef50_Q2AB84 Cluster: Bitter taste receptor; n=1; Monodelphis
           domestica|Rep: Bitter taste receptor - Monodelphis
           domestica (Short-tailed gray opossum)
          Length = 300

 Score = 33.5 bits (73), Expect = 3.7
 Identities = 14/27 (51%), Positives = 21/27 (77%)
 Frame = +3

Query: 9   FFFLIIHTYLFLPLIIDKLISLCLNST 89
           FFFLI++T  FLPLII  +I + ++S+
Sbjct: 233 FFFLILYTSYFLPLIISTIIPISVSSS 259


>UniRef50_Q6FV58 Cluster: Similarity; n=1; Candida glabrata|Rep:
           Similarity - Candida glabrata (Yeast) (Torulopsis
           glabrata)
          Length = 240

 Score = 32.7 bits (71), Expect = 6.5
 Identities = 14/25 (56%), Positives = 16/25 (64%)
 Frame = -3

Query: 458 SPYPDRSRDETLLKPDCPGLFSLQN 384
           S Y  R RDETL KPDC G+   +N
Sbjct: 61  SDYSYRPRDETLKKPDCDGILDNKN 85


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 580,792,023
Number of Sequences: 1657284
Number of extensions: 12473576
Number of successful extensions: 26297
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 25366
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26281
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 40404161459
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)