Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_O07
(268 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_04_0148 - 17708737-17709027,17709270-17709518,17709713-177098... 28 0.89
06_03_0390 - 20280355-20281178,20281392-20281565,20281613-20281847 27 2.1
05_05_0348 + 24271764-24271898,24273055-24273144,24273205-242733... 27 2.1
12_01_0750 - 6754126-6755248,6755331-6755791 27 2.7
06_01_0245 - 1849156-1849197,1849300-1849341,1849564-1849605,184... 27 2.7
10_06_0105 - 10790092-10790323,10791092-10791234,10791322-107914... 26 3.6
06_03_0496 - 21415596-21416068,21416618-21417224 26 3.6
03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,426... 26 3.6
05_07_0314 + 29162075-29163436,29163520-29163900,29164911-29165441 26 4.8
12_01_0033 - 272848-272943,274026-274169,274264-274375,274521-27... 25 6.3
11_01_0035 - 256087-256185,256287-256430,256521-256632,256777-25... 25 6.3
10_01_0127 - 1519803-1520036,1520802-1521095,1521840-1522614,152... 25 6.3
03_05_0032 + 20043252-20044361 25 6.3
07_01_1089 + 10004773-10004831,10004924-10005033,10005631-100057... 25 8.3
06_01_0503 - 3596664-3596837,3597647-3598069,3598362-3598595,359... 25 8.3
06_01_0309 - 2233573-2234556,2234670-2234721,2235406-2236391,223... 25 8.3
>03_04_0148 -
17708737-17709027,17709270-17709518,17709713-17709851,
17710050-17710268,17710360-17710735,17711741-17711909
Length = 480
Score = 28.3 bits (60), Expect = 0.89
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = -1
Query: 163 ISVTFINNVSHFILLLFK----ERSYCTCLILKEFLERP*KLFCKRCED 29
+SV F N+ H I L F+ +R Y C KEF+++ L C D
Sbjct: 28 VSVKFANDDFHAISLQFRLLRQQRRYMPCDAFKEFIDKQGNLNGTLCSD 76
>06_03_0390 - 20280355-20281178,20281392-20281565,20281613-20281847
Length = 410
Score = 27.1 bits (57), Expect = 2.1
Identities = 17/42 (40%), Positives = 23/42 (54%), Gaps = 5/42 (11%)
Frame = +2
Query: 110 FEEQQNEMG--NIVN---ESYRDAVNFIEEQRRKIEDDVSDD 220
FE + G N+V ES+RD + EQR KI D++DD
Sbjct: 247 FERPGTQFGLYNVVQKSGESFRDYIRRFSEQRNKIS-DITDD 287
>05_05_0348 +
24271764-24271898,24273055-24273144,24273205-24273303,
24273725-24273826,24273912-24274088,24274193-24274398,
24274491-24274575,24274641-24274798,24274873-24274948,
24275117-24275245,24275313-24275457,24275561-24275691,
24276183-24276335,24276447-24276636,24277006-24277139,
24277248-24277406,24277659-24277964,24278040-24278216,
24278446-24278529,24278592-24278822,24278913-24279002,
24279090-24279211,24279293-24279448,24279477-24279635,
24279705-24279765,24280004-24280138,24280384-24280471,
24280548-24280620,24280883-24280994,24281691-24281711
Length = 1327
Score = 27.1 bits (57), Expect = 2.1
Identities = 10/27 (37%), Positives = 18/27 (66%)
Frame = +2
Query: 155 YRDAVNFIEEQRRKIEDDVSDDTYKID 235
YR+ + ++++ +K+ED DT KID
Sbjct: 399 YREDLKHLKQKIKKLEDKTEKDTSKID 425
>12_01_0750 - 6754126-6755248,6755331-6755791
Length = 527
Score = 26.6 bits (56), Expect = 2.7
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -3
Query: 170 LLHLCNFH*QCFPFHSVALQRKILLHL 90
LLH FH FP+ S L R+++L L
Sbjct: 24 LLHFQVFHLSLFPYPSYLLSRRVVLPL 50
>06_01_0245 -
1849156-1849197,1849300-1849341,1849564-1849605,
1849697-1849824,1850078-1850285,1850381-1850561,
1851761-1852114,1852577-1852803
Length = 407
Score = 26.6 bits (56), Expect = 2.7
Identities = 14/68 (20%), Positives = 34/68 (50%), Gaps = 2/68 (2%)
Frame = +2
Query: 47 EQFSWPFQEFFQDQTSAVRSF--FEEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDD 220
E+ WP + + + S ++F + N++ ++ + Y D NF+E+ ++++ VS +
Sbjct: 210 EKLYWP--DGTRKKCSKAQAFENVKNMMNQLAKVILDMYNDDQNFLEDLSYELKEVVSFE 267
Query: 221 TYKIDTKW 244
+W
Sbjct: 268 PIFESHRW 275
>10_06_0105 - 10790092-10790323,10791092-10791234,10791322-10791429,
10791796-10791903,10793133-10797686,10798347-10798461,
10799597-10799724,10799843-10800043,10800158-10800227,
10801233-10801314,10801433-10801556,10801761-10801778
Length = 1960
Score = 26.2 bits (55), Expect = 3.6
Identities = 12/46 (26%), Positives = 27/46 (58%)
Frame = +2
Query: 98 VRSFFEEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDDTYKID 235
++S EEQ+ E+ +++ S + NF +EQ + + +++ T K +
Sbjct: 1461 LKSKLEEQRTEILSLLQNSGHELANF-KEQNKDLTQKLAEQTLKAE 1505
Score = 25.8 bits (54), Expect = 4.8
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 149 ESYRDAVNFIEEQRRKIEDDVSDDTYK 229
++ ++ +NF EE K+E ++ D T+K
Sbjct: 1089 DAMKEKLNFSEEHMEKLEKELQDMTHK 1115
>06_03_0496 - 21415596-21416068,21416618-21417224
Length = 359
Score = 26.2 bits (55), Expect = 3.6
Identities = 13/36 (36%), Positives = 17/36 (47%)
Frame = +2
Query: 113 EEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDD 220
EE + G IVNE EE+ + +DD DD
Sbjct: 324 EEDETLSGFIVNEEDEPMEELSEEEEDEFDDDDDDD 359
>03_01_0577 + 4261249-4262055,4262149-4262203,4262293-4262468,
4262554-4262718,4262811-4263178,4263225-4263861,
4263952-4265844,4266325-4266672
Length = 1482
Score = 26.2 bits (55), Expect = 3.6
Identities = 11/24 (45%), Positives = 16/24 (66%)
Frame = +2
Query: 104 SFFEEQQNEMGNIVNESYRDAVNF 175
++F+E+ N MG +V RDAV F
Sbjct: 1002 AWFDEEDNAMGVLVTRLARDAVAF 1025
>05_07_0314 + 29162075-29163436,29163520-29163900,29164911-29165441
Length = 757
Score = 25.8 bits (54), Expect = 4.8
Identities = 12/31 (38%), Positives = 19/31 (61%)
Frame = +2
Query: 128 EMGNIVNESYRDAVNFIEEQRRKIEDDVSDD 220
+MG+I+ + IEE R++EDDV D+
Sbjct: 526 DMGSILCRETLTKESVIEEIIREVEDDVGDE 556
>12_01_0033 -
272848-272943,274026-274169,274264-274375,274521-274702,
274781-274912,275038-276330,279841-280545,280649-280695,
280787-280865
Length = 929
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = +2
Query: 167 VNFIEEQRRKIEDDVSDDT 223
+N ++E+R+K++DDV+ T
Sbjct: 160 INSLQEERKKLQDDVARGT 178
>11_01_0035 -
256087-256185,256287-256430,256521-256632,256777-256958,
257038-257169,257297-258589,259133-259837,260465-260549,
260604-260650,260810-260900,261838-262101,262195-262309,
262455-262570,262713-262847,262969-263036,263292-263411
Length = 1235
Score = 25.4 bits (53), Expect = 6.3
Identities = 8/19 (42%), Positives = 16/19 (84%)
Frame = +2
Query: 167 VNFIEEQRRKIEDDVSDDT 223
+N ++E+R+K++DDV+ T
Sbjct: 465 INSLQEERKKLQDDVARGT 483
>10_01_0127 -
1519803-1520036,1520802-1521095,1521840-1522614,
1524574-1525412
Length = 713
Score = 25.4 bits (53), Expect = 6.3
Identities = 14/42 (33%), Positives = 19/42 (45%)
Frame = +2
Query: 71 EFFQDQTSAVRSFFEEQQNEMGNIVNESYRDAVNFIEEQRRK 196
E F QT S FE+ +N +VN S ++ E R K
Sbjct: 460 EGFVQQTQNGGSLFEQGENYFNELVNRSMIQPIDIDAEGRAK 501
>03_05_0032 + 20043252-20044361
Length = 369
Score = 25.4 bits (53), Expect = 6.3
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 55 FMAVPRILSRSNKCSKIFL*RATE*NGK 138
F A PR+L R+N+ ++ RA NGK
Sbjct: 76 FRATPRLLIRTNRLAEELFERAGNGNGK 103
>07_01_1089 +
10004773-10004831,10004924-10005033,10005631-10005749,
10005833-10005930,10006834-10006921,10006993-10007127,
10007211-10007313,10007506-10007618,10007821-10007868
Length = 290
Score = 25.0 bits (52), Expect = 8.3
Identities = 15/59 (25%), Positives = 29/59 (49%), Gaps = 3/59 (5%)
Frame = +2
Query: 53 FSWPFQEF---FQDQTSAVRSFFEEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDD 220
+++PF+EF + + V EE++ E+ + + D + IE+ +DD DD
Sbjct: 177 YNYPFKEFDTILEMEKDDVAPTEEEEEEEVEYVEGDDEMDDMEDIEDFGGLPDDDEDDD 235
>06_01_0503 -
3596664-3596837,3597647-3598069,3598362-3598595,
3598720-3598993,3599390-3599523,3599572-3599634,
3599759-3599846,3599919-3599989,3600898-3601010,
3601836-3602004,3602580-3602671,3602819-3603295,
3603736-3604090
Length = 888
Score = 25.0 bits (52), Expect = 8.3
Identities = 9/25 (36%), Positives = 17/25 (68%)
Frame = +2
Query: 146 NESYRDAVNFIEEQRRKIEDDVSDD 220
+E YR + IE Q +KI+D ++++
Sbjct: 699 DEFYRSRKDLIESQLKKIQDGIAEE 723
>06_01_0309 -
2233573-2234556,2234670-2234721,2235406-2236391,
2237790-2238050
Length = 760
Score = 25.0 bits (52), Expect = 8.3
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +2
Query: 149 ESYRDAVNFIEEQRRKIEDDVSDDTYKIDTKWQVS 253
E D +E+ + DDVSD + + T W++S
Sbjct: 360 EKSDDVSRLLEQHDAENIDDVSDSSVECITGWEIS 394
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,686,483
Number of Sequences: 37544
Number of extensions: 83499
Number of successful extensions: 274
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 268
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 274
length of database: 14,793,348
effective HSP length: 67
effective length of database: 12,277,900
effective search space used: 257835900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -