Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_O07
(268 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical pr... 31 0.11
Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical pr... 31 0.11
Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical pr... 31 0.11
Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical pr... 31 0.11
Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical pr... 31 0.11
Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical pr... 31 0.11
X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic int... 31 0.11
U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finge... 29 0.60
Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical pr... 28 0.79
U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate fi... 27 1.8
Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical pr... 26 3.2
Z82282-8|CAB05278.1| 575|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z78412-6|CAD24482.1| 424|Caenorhabditis elegans Hypothetical pr... 26 4.2
Z78412-5|CAB01648.1| 484|Caenorhabditis elegans Hypothetical pr... 26 4.2
L03524-2|AAA28151.1| 488|Caenorhabditis elegans protein-tyrosin... 26 4.2
Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical pr... 25 5.6
Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical pr... 25 5.6
AC006631-3|AAF39792.1| 201|Caenorhabditis elegans Hypothetical ... 25 5.6
Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical pr... 25 7.4
Z73428-4|CAH60777.1| 218|Caenorhabditis elegans Hypothetical pr... 25 7.4
U41538-7|AAP31430.1| 465|Caenorhabditis elegans Intermediate fi... 25 7.4
U41538-6|AAG00007.2| 575|Caenorhabditis elegans Intermediate fi... 25 7.4
AF067217-3|AAF99975.3| 479|Caenorhabditis elegans Hypothetical ... 25 7.4
AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical ... 25 7.4
Z77661-7|CAB01188.1| 140|Caenorhabditis elegans Hypothetical pr... 25 9.7
Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical pr... 25 9.7
AF098995-9|AAC67486.1| 295|Caenorhabditis elegans F-box b prote... 25 9.7
AF024499-7|AAB70358.3| 733|Caenorhabditis elegans Hypothetical ... 25 9.7
>Z73423-7|CAL36497.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 FFQDQTSAVRSFFEEQQNEMGNIVNE--SYRDAVNFIEEQRRKIEDDV 211
F Q+ S +R E ++ EM ++ + SY + V F+E Q RK+ D+
Sbjct: 46 FGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADL 93
>Z73423-6|CAD44093.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 FFQDQTSAVRSFFEEQQNEMGNIVNE--SYRDAVNFIEEQRRKIEDDV 211
F Q+ S +R E ++ EM ++ + SY + V F+E Q RK+ D+
Sbjct: 54 FGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADL 101
>Z73423-5|CAA97777.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 FFQDQTSAVRSFFEEQQNEMGNIVNE--SYRDAVNFIEEQRRKIEDDV 211
F Q+ S +R E ++ EM ++ + SY + V F+E Q RK+ D+
Sbjct: 54 FGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADL 101
>Z50045-6|CAL36494.1| 567|Caenorhabditis elegans Hypothetical
protein F38B2.1c protein.
Length = 567
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 FFQDQTSAVRSFFEEQQNEMGNIVNE--SYRDAVNFIEEQRRKIEDDV 211
F Q+ S +R E ++ EM ++ + SY + V F+E Q RK+ D+
Sbjct: 46 FGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADL 93
>Z50045-5|CAD44129.1| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1b protein.
Length = 575
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 FFQDQTSAVRSFFEEQQNEMGNIVNE--SYRDAVNFIEEQRRKIEDDV 211
F Q+ S +R E ++ EM ++ + SY + V F+E Q RK+ D+
Sbjct: 54 FGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADL 101
>Z50045-4|CAA90365.3| 575|Caenorhabditis elegans Hypothetical
protein F38B2.1a protein.
Length = 575
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 FFQDQTSAVRSFFEEQQNEMGNIVNE--SYRDAVNFIEEQRRKIEDDV 211
F Q+ S +R E ++ EM ++ + SY + V F+E Q RK+ D+
Sbjct: 54 FGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADL 101
>X70834-1|CAA50182.1| 592|Caenorhabditis elegans Cytoplasmic
intermediate filament(IF) protein protein.
Length = 592
Score = 31.1 bits (67), Expect = 0.11
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 FFQDQTSAVRSFFEEQQNEMGNIVNE--SYRDAVNFIEEQRRKIEDDV 211
F Q+ S +R E ++ EM ++ + SY + V F+E Q RK+ D+
Sbjct: 72 FGQNAASTIRDSREREKKEMSDLNDRLASYIEKVRFLEAQNRKLAADL 119
>U12964-3|AAA91222.2| 1032|Caenorhabditis elegans Nhl (ring finger
b-box coiled coil)domain containing protein 2 protein.
Length = 1032
Score = 28.7 bits (61), Expect = 0.60
Identities = 12/39 (30%), Positives = 25/39 (64%)
Frame = +2
Query: 113 EEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDDTYK 229
++ E+ N + E+Y+ +VN +EE R + E ++ D+ Y+
Sbjct: 324 DKHYEELRNSIEEAYQKSVNDLEEARIRQESNI-DEMYR 361
>Z68507-3|CAA92824.2| 1134|Caenorhabditis elegans Hypothetical
protein M18.5 protein.
Length = 1134
Score = 28.3 bits (60), Expect = 0.79
Identities = 15/35 (42%), Positives = 23/35 (65%)
Frame = -2
Query: 135 PISFCCSSKKDLTALV*S*KNSWNGHENCSVRGAR 31
PIS+C S+KK + +V S ++ GHEN ++ AR
Sbjct: 2 PISYCVSAKK-ASVVVESVVGNFTGHENVNLIVAR 35
>U50197-4|AAA91257.1| 443|Caenorhabditis elegans Intermediate
filament, d protein 2 protein.
Length = 443
Score = 27.1 bits (57), Expect = 1.8
Identities = 13/48 (27%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 FFQDQTSAVRSFFEEQQNEMGNIVNE--SYRDAVNFIEEQRRKIEDDV 211
+ Q+ + +R E ++ E+ ++ N Y + V F+E Q R +E+D+
Sbjct: 40 YAQNAAAIIRDNREREKVEIADLNNRLARYVEKVRFLEAQNRVLENDI 87
>Z54237-1|CAA90987.2| 445|Caenorhabditis elegans Hypothetical
protein T11B7.1 protein.
Length = 445
Score = 26.2 bits (55), Expect = 3.2
Identities = 15/58 (25%), Positives = 27/58 (46%)
Frame = +2
Query: 62 PFQEFFQDQTSAVRSFFEEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDDTYKID 235
P E +D VR+F + +N GN+ N ++++ E Q + D S ++ D
Sbjct: 378 PKNEISEDLAKTVRNFGKRLRNSRGNLKN-AFKELEALKEVQEEEGSSDESSESSASD 434
>Z82282-8|CAB05278.1| 575|Caenorhabditis elegans Hypothetical
protein T07G12.11 protein.
Length = 575
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/48 (33%), Positives = 24/48 (50%)
Frame = +2
Query: 110 FEEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDDTYKIDTKWQVS 253
+E+ NE G+ NES+ A + E R I +DV D++ VS
Sbjct: 299 YEQPINEYGD--NESFLSAKSLCTEPRSSISEDVKPVLKATDSERTVS 344
>Z78412-6|CAD24482.1| 424|Caenorhabditis elegans Hypothetical
protein M176.6b protein.
Length = 424
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 47 EQFSWPFQEFFQDQTSAVRSFFEEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDD 220
+QF W F F+ S FFEE + + E + + E++ K+ED + D
Sbjct: 368 KQF-WNFDATFRPSFSKCVEFFEEHLSVSATNLLEQIQKTLKSEAERQSKLEDWIRRD 424
>Z78412-5|CAB01648.1| 484|Caenorhabditis elegans Hypothetical
protein M176.6a protein.
Length = 484
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 47 EQFSWPFQEFFQDQTSAVRSFFEEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDD 220
+QF W F F+ S FFEE + + E + + E++ K+ED + D
Sbjct: 428 KQF-WNFDATFRPSFSKCVEFFEEHLSVSATNLLEQIQKTLKSEAERQSKLEDWIRRD 484
>L03524-2|AAA28151.1| 488|Caenorhabditis elegans protein-tyrosine
kinase protein.
Length = 488
Score = 25.8 bits (54), Expect = 4.2
Identities = 16/58 (27%), Positives = 26/58 (44%)
Frame = +2
Query: 47 EQFSWPFQEFFQDQTSAVRSFFEEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDD 220
+QF W F F+ S FFEE + + E + + E++ K+ED + D
Sbjct: 432 KQF-WNFDATFRPSFSKCVEFFEEHLSVSATNLLEQIQKTLKSEAERQSKLEDWIRRD 488
>Z92777-6|CAE17682.1| 353|Caenorhabditis elegans Hypothetical
protein C17H1.9 protein.
Length = 353
Score = 25.4 bits (53), Expect = 5.6
Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 6/51 (11%)
Frame = +2
Query: 95 AVRSFFEEQQNEMGNI------VNESYRDAVNFIEEQRRKIEDDVSDDTYK 229
+V F EE + M + +NE V +E+QR K+E+ ++D K
Sbjct: 78 SVEKFNEEHKTYMAKLEKQLEKINEKGEQDVKEVEQQRVKLEEQRTEDLVK 128
>Z82077-8|CAB63329.1| 459|Caenorhabditis elegans Hypothetical
protein W09C5.2 protein.
Length = 459
Score = 25.4 bits (53), Expect = 5.6
Identities = 10/24 (41%), Positives = 15/24 (62%)
Frame = +2
Query: 146 NESYRDAVNFIEEQRRKIEDDVSD 217
NE RD +EE+RR+ E D+ +
Sbjct: 321 NEKNRDPFTHLEEERRQKEQDLDE 344
>AC006631-3|AAF39792.1| 201|Caenorhabditis elegans Hypothetical
protein F27B3.6 protein.
Length = 201
Score = 25.4 bits (53), Expect = 5.6
Identities = 13/46 (28%), Positives = 23/46 (50%)
Frame = +2
Query: 62 PFQEFFQDQTSAVRSFFEEQQNEMGNIVNESYRDAVNFIEEQRRKI 199
P EFF+ TS ++ + NE+ + N+ R VN ++ + I
Sbjct: 150 PTTEFFKIDTSDIKDTTMDNLNEINCMANKENRARVNKSKQTSQSI 195
>Z81117-1|CAB03312.1| 431|Caenorhabditis elegans Hypothetical
protein T06E6.1 protein.
Length = 431
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/42 (28%), Positives = 19/42 (45%)
Frame = +2
Query: 83 DQTSAVRSFFEEQQNEMGNIVNESYRDAVNFIEEQRRKIEDD 208
D+ A + E + E GN+ + YR E+ IE+D
Sbjct: 313 DKKPASKKEINEDETEYGNMTKDGYRSENEDDEDDDDVIEED 354
>Z73428-4|CAH60777.1| 218|Caenorhabditis elegans Hypothetical
protein M142.8 protein.
Length = 218
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 173 FIEEQRRKIEDDVSDDTYKIDTKWQVS 253
F EQ+ KIE S KID WQ+S
Sbjct: 21 FQAEQQEKIEQLQSGIIEKIDEDWQLS 47
>U41538-7|AAP31430.1| 465|Caenorhabditis elegans Intermediate
filament, d protein1, isoform b protein.
Length = 465
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 FFQDQTSAVRSFFEEQQNEMGNIVNE--SYRDAVNFIEEQRRKIEDDV 211
+ Q +R + ++ E+ ++ N Y + V F+E Q R +E+D+
Sbjct: 38 YAQAAAVTIRDNRDREKREIADLNNRLARYVEKVRFLEAQNRVLENDI 85
>U41538-6|AAG00007.2| 575|Caenorhabditis elegans Intermediate
filament, d protein1, isoform a protein.
Length = 575
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/48 (25%), Positives = 25/48 (52%), Gaps = 2/48 (4%)
Frame = +2
Query: 74 FFQDQTSAVRSFFEEQQNEMGNIVNE--SYRDAVNFIEEQRRKIEDDV 211
+ Q +R + ++ E+ ++ N Y + V F+E Q R +E+D+
Sbjct: 38 YAQAAAVTIRDNRDREKREIADLNNRLARYVEKVRFLEAQNRVLENDI 85
>AF067217-3|AAF99975.3| 479|Caenorhabditis elegans Hypothetical
protein F56A6.4 protein.
Length = 479
Score = 25.0 bits (52), Expect = 7.4
Identities = 13/63 (20%), Positives = 32/63 (50%)
Frame = +2
Query: 80 QDQTSAVRSFFEEQQNEMGNIVNESYRDAVNFIEEQRRKIEDDVSDDTYKIDTKWQVSS* 259
Q+QTS+ Q+N N+V + + E++ +K+ S++ Y ++K+ + +
Sbjct: 71 QNQTSSYSLCSSSQENTDINVVARPEKRKLTDDEKETQKVHGSHSENIYSPNSKFPLKNL 130
Query: 260 SMV 268
++
Sbjct: 131 KLI 133
>AC024878-2|AAK85512.1| 345|Caenorhabditis elegans Hypothetical
protein Y97E10AL.2 protein.
Length = 345
Score = 25.0 bits (52), Expect = 7.4
Identities = 12/34 (35%), Positives = 15/34 (44%)
Frame = -3
Query: 230 FYMYXXXXXXLFSSFVLQ*NLLHLCNFH*QCFPF 129
FY + F V NLL CN+H CF +
Sbjct: 117 FYAHGNSFDRTFYHRVEMYNLLSDCNYHVVCFDY 150
>Z77661-7|CAB01188.1| 140|Caenorhabditis elegans Hypothetical
protein F40G12.9 protein.
Length = 140
Score = 24.6 bits (51), Expect = 9.7
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = -3
Query: 140 CFPFHSVALQRKILLHLFDLERI 72
CF S AL +K+L F+LE +
Sbjct: 20 CFSMESQALMKKLLTGRFELENL 42
>Z68161-7|CAD36488.1| 1130|Caenorhabditis elegans Hypothetical
protein F20C5.2b protein.
Length = 1130
Score = 24.6 bits (51), Expect = 9.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 4/44 (9%)
Frame = +2
Query: 110 FEEQQNEMGN--IVNE-SYRD-AVNFIEEQRRKIEDDVSDDTYK 229
F+E++ E+ N +NE Y D +N EE RK+ + D Y+
Sbjct: 777 FDEKKPELENNETMNELEYVDYLINKTEEMTRKLNESTDSDDYR 820
>AF098995-9|AAC67486.1| 295|Caenorhabditis elegans F-box b protein
protein 19 protein.
Length = 295
Score = 24.6 bits (51), Expect = 9.7
Identities = 6/26 (23%), Positives = 20/26 (76%)
Frame = -1
Query: 163 ISVTFINNVSHFILLLFKERSYCTCL 86
++++F++N + ++ + KE+++ TC+
Sbjct: 29 LALSFVSNKTRRLIKMLKEKNHITCI 54
>AF024499-7|AAB70358.3| 733|Caenorhabditis elegans Hypothetical
protein F42G2.6 protein.
Length = 733
Score = 24.6 bits (51), Expect = 9.7
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +2
Query: 161 DAVNFIEEQRRKIEDDVSDDTYKIDTK 241
DA++F+E++ RK + S D KI K
Sbjct: 236 DAIHFLEQEYRKTKYISSTDCQKISEK 262
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 5,294,072
Number of Sequences: 27780
Number of extensions: 87554
Number of successful extensions: 365
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 365
length of database: 12,740,198
effective HSP length: 67
effective length of database: 10,878,938
effective search space used: 228457698
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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