Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_O07
(268 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein. 21 2.0
DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholi... 21 3.5
EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.1
EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.1
EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.1
EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.1
EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.1
EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholi... 20 6.1
DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protei... 20 6.1
DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholi... 20 6.1
DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholi... 20 6.1
AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9 methylt... 20 6.1
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso... 19 8.0
AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein. 19 8.0
>X91509-1|CAA62809.1| 103|Apis mellifera histone H4 protein.
Length = 103
Score = 21.4 bits (43), Expect = 2.0
Identities = 9/29 (31%), Positives = 15/29 (51%)
Frame = +2
Query: 110 FEEQQNEMGNIVNESYRDAVNFIEEQRRK 196
+EE + + + RDAV + E +RK
Sbjct: 52 YEETRGVLKVFLENVIRDAVTYTEHTKRK 80
>DQ026039-1|AAY87898.1| 427|Apis mellifera nicotinic acetylcholine
receptor beta2subunit protein.
Length = 427
Score = 20.6 bits (41), Expect = 3.5
Identities = 5/16 (31%), Positives = 11/16 (68%)
Frame = +2
Query: 203 DDVSDDTYKIDTKWQV 250
+ + DD Y +T+W++
Sbjct: 195 EQILDDMYNNNTEWEI 210
>EF127805-1|ABL67942.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 6 protein.
Length = 461
Score = 19.8 bits (39), Expect = 6.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 69 WNGHENCSVRGARIVSNKI 13
WN E V+ RI NK+
Sbjct: 50 WNESEYGGVKDLRITPNKL 68
>EF127804-1|ABL67941.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 5 protein.
Length = 461
Score = 19.8 bits (39), Expect = 6.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 69 WNGHENCSVRGARIVSNKI 13
WN E V+ RI NK+
Sbjct: 50 WNESEYGGVKDLRITPNKL 68
>EF127803-1|ABL67940.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 4 protein.
Length = 461
Score = 19.8 bits (39), Expect = 6.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 69 WNGHENCSVRGARIVSNKI 13
WN E V+ RI NK+
Sbjct: 50 WNESEYGGVKDLRITPNKL 68
>EF127802-1|ABL67939.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 3 protein.
Length = 461
Score = 19.8 bits (39), Expect = 6.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 69 WNGHENCSVRGARIVSNKI 13
WN E V+ RI NK+
Sbjct: 50 WNESEYGGVKDLRITPNKL 68
>EF127801-1|ABL67938.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 2 protein.
Length = 461
Score = 19.8 bits (39), Expect = 6.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 69 WNGHENCSVRGARIVSNKI 13
WN E V+ RI NK+
Sbjct: 50 WNESEYGGVKDLRITPNKL 68
>EF127800-1|ABL67937.1| 461|Apis mellifera nicotinic acetylcholine
receptor subunitalpha 6 transcript variant 1 protein.
Length = 461
Score = 19.8 bits (39), Expect = 6.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 69 WNGHENCSVRGARIVSNKI 13
WN E V+ RI NK+
Sbjct: 50 WNESEYGGVKDLRITPNKL 68
>DQ257631-1|ABB82366.1| 424|Apis mellifera yellow e3-like protein
protein.
Length = 424
Score = 19.8 bits (39), Expect = 6.1
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = +1
Query: 49 TVFMAVPRI 75
TVF+A+PRI
Sbjct: 72 TVFVAIPRI 80
>DQ026036-1|AAY87895.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 6.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 69 WNGHENCSVRGARIVSNKI 13
WN E V+ RI NK+
Sbjct: 118 WNESEYGGVKDLRITPNKL 136
>DQ026035-1|AAY87894.1| 529|Apis mellifera nicotinic acetylcholine
receptor alpha6subunit protein.
Length = 529
Score = 19.8 bits (39), Expect = 6.1
Identities = 8/19 (42%), Positives = 10/19 (52%)
Frame = -2
Query: 69 WNGHENCSVRGARIVSNKI 13
WN E V+ RI NK+
Sbjct: 118 WNESEYGGVKDLRITPNKL 136
>AM050259-1|CAJ18340.1| 683|Apis mellifera putative H3K9
methyltransferase protein.
Length = 683
Score = 19.8 bits (39), Expect = 6.1
Identities = 6/15 (40%), Positives = 8/15 (53%)
Frame = -1
Query: 169 YCISVTFINNVSHFI 125
Y + N+SHFI
Sbjct: 564 YTVDAAIYGNISHFI 578
>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
protein.
Length = 1770
Score = 19.4 bits (38), Expect = 8.0
Identities = 10/22 (45%), Positives = 13/22 (59%)
Frame = +2
Query: 92 SAVRSFFEEQQNEMGNIVNESY 157
S +RSFFE QN + NE +
Sbjct: 544 SYIRSFFELLQNP--KVSNEQF 563
>AB167961-1|BAD51404.1| 554|Apis mellifera E74 protein.
Length = 554
Score = 19.4 bits (38), Expect = 8.0
Identities = 6/12 (50%), Positives = 9/12 (75%)
Frame = -1
Query: 130 FILLLFKERSYC 95
F+L L ++R YC
Sbjct: 463 FLLKLLQDREYC 474
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,721
Number of Sequences: 438
Number of extensions: 1016
Number of successful extensions: 15
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 48
effective length of database: 125,319
effective search space used: 5012760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 37 (19.9 bits)
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