BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_O06
(436 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3101|AAN13904.1| 713|Drosophila melanogaster CG31423-P... 31 0.51
BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p pro... 30 1.2
AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-P... 30 1.2
BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p pro... 29 2.1
AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein. 29 2.1
AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein. 29 2.1
AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein. 29 2.1
AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein. 29 2.1
AE014298-2104|AAF48424.1| 2075|Drosophila melanogaster CG5627-PA... 29 2.1
AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB... 29 2.1
AE013599-3878|AAF47210.1| 706|Drosophila melanogaster CG13579-P... 29 2.1
AY118602-1|AAM49971.1| 267|Drosophila melanogaster LP04242p pro... 28 4.8
AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB... 28 4.8
AE014296-559|AAF47715.2| 938|Drosophila melanogaster CG14955-PA... 28 4.8
AY118745-1|AAM50605.1| 396|Drosophila melanogaster GH05812p pro... 27 8.3
AF038584-1|AAB97004.1| 396|Drosophila melanogaster QKR58E-1 pro... 27 8.3
AE013599-3394|AAF46844.1| 396|Drosophila melanogaster CG3613-PA... 27 8.3
>AE014297-3101|AAN13904.1| 713|Drosophila melanogaster CG31423-PA
protein.
Length = 713
Score = 31.5 bits (68), Expect = 0.51
Identities = 13/35 (37%), Positives = 23/35 (65%)
Frame = -3
Query: 224 IVIMVFGMICANVYGCGRSTHCTEPSEVVRLRSFK 120
+VI VFG++ +N C S T+P++ ++R+FK
Sbjct: 480 LVISVFGLVYSNFVSCTLSALLTKPAQNPQVRNFK 514
>BT004503-1|AAO42667.1| 2201|Drosophila melanogaster GH07949p
protein.
Length = 2201
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Frame = +3
Query: 9 KRKSTVVEEEATEKTXXXXXXXXXXXXPHQLKRKKRPLKTTQ---PY--YLARFSAMRRP 173
K+KS VEE E+ P QL +K++ T + Y LAR
Sbjct: 454 KKKSVQVEESDDEEAKEKEKEKEKPKPPKQLPKKRKTAFTEELIGDYKGILARKRMASLN 513
Query: 174 TTPIYICTYHPKNHYNDTFAKNCGSIAS 257
+ I TY + H + A +C S S
Sbjct: 514 ASAIVAATYEVERHLDKNLASDCSSFES 541
>AE014298-2947|AAF49026.2| 2529|Drosophila melanogaster CG32529-PA,
isoform A protein.
Length = 2529
Score = 30.3 bits (65), Expect = 1.2
Identities = 24/88 (27%), Positives = 34/88 (38%), Gaps = 5/88 (5%)
Frame = +3
Query: 9 KRKSTVVEEEATEKTXXXXXXXXXXXXPHQLKRKKRPLKTTQ---PY--YLARFSAMRRP 173
K+KS VEE E+ P QL +K++ T + Y LAR
Sbjct: 782 KKKSVQVEESDDEEAKEKEKEKEKPKPPKQLPKKRKTAFTEELIGDYKGILARKRMASLN 841
Query: 174 TTPIYICTYHPKNHYNDTFAKNCGSIAS 257
+ I TY + H + A +C S S
Sbjct: 842 ASAIVAATYEVERHLDKNLASDCSSFES 869
>BT009980-1|AAQ22449.1| 1105|Drosophila melanogaster RE54143p
protein.
Length = 1105
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 336 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 205
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 117 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 160
>AY260057-2|AAO85038.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 336 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 205
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 313 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 356
>AY260056-2|AAO85036.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 336 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 205
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 313 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 356
>AY260055-2|AAO85034.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 336 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 205
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 313 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 356
>AY260051-1|AAO84261.1| 1413|Drosophila melanogaster Hmr protein.
Length = 1413
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 336 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 205
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 313 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 356
>AE014298-2104|AAF48424.1| 2075|Drosophila melanogaster CG5627-PA
protein.
Length = 2075
Score = 29.5 bits (63), Expect = 2.1
Identities = 18/44 (40%), Positives = 23/44 (52%)
Frame = +1
Query: 55 APETEGESGGGNPTS*SGRSDRLKLRNLTTSLGSVQCVDRPHPY 186
AP + ESGG + S R KLRN SL S+ C+ HP+
Sbjct: 197 APSADSESGGSHSPSPRASRKRTKLRN--QSLTSL-CIISHHPF 237
>AE014298-1470|AAF46605.2| 1413|Drosophila melanogaster CG1619-PB
protein.
Length = 1413
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/44 (22%), Positives = 25/44 (56%)
Frame = -2
Query: 336 HIMIGSMRCIL*ILTILNSQVQIINLRKRSIRNSLRTYRYNGFW 205
H I + ++ ++T + + +++ L + S+ N ++ RY+ FW
Sbjct: 313 HEPIENFHTVMALITTMRNMPELVQLTEDSLHNKVKPPRYDEFW 356
>AE013599-3878|AAF47210.1| 706|Drosophila melanogaster CG13579-PA
protein.
Length = 706
Score = 29.5 bits (63), Expect = 2.1
Identities = 10/26 (38%), Positives = 16/26 (61%)
Frame = +3
Query: 186 YICTYHPKNHYNDTFAKNCGSIASLS 263
Y+C HP+ +Y + K C +I SL+
Sbjct: 139 YMCALHPRRYYQHSSKKGCVAILSLT 164
>AY118602-1|AAM49971.1| 267|Drosophila melanogaster LP04242p
protein.
Length = 267
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = -3
Query: 233 CERIVIMVFGMICANVYGC-----GRSTHCTEPSEVVRLRSFKRSLLPLQLVGFPPPLSP 69
C + +++ G++ +Y G HC+ S RL + P++ PPPL+P
Sbjct: 60 CPLVRLLILGLLALPIYNAILIVVGWRLHCSVSSSAERLVVDSQGNRPVKRQAPPPPLAP 119
>AE014296-560|AAN11529.1| 1035|Drosophila melanogaster CG14955-PB,
isoform B protein.
Length = 1035
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = -3
Query: 233 CERIVIMVFGMICANVYGC-----GRSTHCTEPSEVVRLRSFKRSLLPLQLVGFPPPLSP 69
C + +++ G++ +Y G HC+ S RL + P++ PPPL+P
Sbjct: 828 CPLVRLLILGLLALPIYNAILIVVGWRLHCSVSSSAERLVVDSQGNRPVKRQAPPPPLAP 887
>AE014296-559|AAF47715.2| 938|Drosophila melanogaster CG14955-PA,
isoform A protein.
Length = 938
Score = 28.3 bits (60), Expect = 4.8
Identities = 15/60 (25%), Positives = 27/60 (45%), Gaps = 5/60 (8%)
Frame = -3
Query: 233 CERIVIMVFGMICANVYGC-----GRSTHCTEPSEVVRLRSFKRSLLPLQLVGFPPPLSP 69
C + +++ G++ +Y G HC+ S RL + P++ PPPL+P
Sbjct: 731 CPLVRLLILGLLALPIYNAILIVVGWRLHCSVSSSAERLVVDSQGNRPVKRQAPPPPLAP 790
>AY118745-1|AAM50605.1| 396|Drosophila melanogaster GH05812p
protein.
Length = 396
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 55 APETEGESGGGNPTS*SGRSDRLKLRNLTTSLGSVQCVDRPHPYTFAHIIPKTIITIRSQ 234
APET GGG+ TS + D +L N T+ +C+ HII K ++ +
Sbjct: 30 APETPEADGGGHTTSHAALRDTPQL-NEKTNAYLQECLLEKKTLEKKHIITKRLLDDEVE 88
Query: 235 RI 240
+I
Sbjct: 89 KI 90
>AF038584-1|AAB97004.1| 396|Drosophila melanogaster QKR58E-1
protein.
Length = 396
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 55 APETEGESGGGNPTS*SGRSDRLKLRNLTTSLGSVQCVDRPHPYTFAHIIPKTIITIRSQ 234
APET GGG+ TS + D +L N T+ +C+ HII K ++ +
Sbjct: 30 APETPEADGGGHTTSHAALRDTPQL-NEKTNAYLQECLLEKKTLEKKHIITKRLLDDEVE 88
Query: 235 RI 240
+I
Sbjct: 89 KI 90
>AE013599-3394|AAF46844.1| 396|Drosophila melanogaster CG3613-PA
protein.
Length = 396
Score = 27.5 bits (58), Expect = 8.3
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +1
Query: 55 APETEGESGGGNPTS*SGRSDRLKLRNLTTSLGSVQCVDRPHPYTFAHIIPKTIITIRSQ 234
APET GGG+ TS + D +L N T+ +C+ HII K ++ +
Sbjct: 30 APETPEADGGGHTTSHAALRDTPQL-NEKTNAYLQECLLEKKTLEKKHIITKRLLDDEVE 88
Query: 235 RI 240
+I
Sbjct: 89 KI 90
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,292,014
Number of Sequences: 53049
Number of extensions: 416350
Number of successful extensions: 1062
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 1048
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1060
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1376136036
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -