Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_O05
(500 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF077531-3|AAC64612.2| 71|Caenorhabditis elegans Hypothetical ... 31 0.47
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 29 1.4
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 29 1.4
AL034393-16|CAA22331.2| 286|Caenorhabditis elegans Hypothetical... 29 2.5
Z72510-2|CAA96652.1| 267|Caenorhabditis elegans Hypothetical pr... 28 3.3
Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical pr... 27 5.8
Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical pr... 27 5.8
U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical pr... 27 7.6
U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical pr... 27 7.6
>AF077531-3|AAC64612.2| 71|Caenorhabditis elegans Hypothetical
protein F13C5.4 protein.
Length = 71
Score = 31.1 bits (67), Expect = 0.47
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Frame = +3
Query: 324 AKDVNIWTIFFKDVLYYSTFPSQFLYTF----ADGESRRFVDLEDTKVDNF 464
+K +N ++ KD +Y S S+F YT AD + R+V +DT D F
Sbjct: 17 SKKINFDKVY-KDAMYASFLKSEFNYTSFLRRADHSAERYVPFQDTSNDTF 66
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 336 NIWTIFFKDVLYYSTFPSQFLYTFADGESRRFVDLEDTKVDNFVIDNEDII 488
++W + D P+ + F G++ RFVD+ D ++ NE+II
Sbjct: 104 DVWNVKRSDSARSPNRPNSLIANFVSGDATRFVDVNDNEIRE---ANEEII 151
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 29.5 bits (63), Expect = 1.4
Identities = 14/51 (27%), Positives = 25/51 (49%)
Frame = +3
Query: 336 NIWTIFFKDVLYYSTFPSQFLYTFADGESRRFVDLEDTKVDNFVIDNEDII 488
++W + D P+ + F G++ RFVD+ D ++ NE+II
Sbjct: 104 DVWNVKRSDSARSPNRPNSLIANFVSGDATRFVDVNDNEIRE---ANEEII 151
>AL034393-16|CAA22331.2| 286|Caenorhabditis elegans Hypothetical
protein Y18D10A.21 protein.
Length = 286
Score = 28.7 bits (61), Expect = 2.5
Identities = 20/59 (33%), Positives = 30/59 (50%)
Frame = +3
Query: 300 NDKAEFIGAKDVNIWTIFFKDVLYYSTFPSQFLYTFADGESRRFVDLEDTKVDNFVIDN 476
NDK E G D++I TI + LY PS+F+ + + ++V +KV VI N
Sbjct: 18 NDKCECGGLSDMSISTILKFNPLYMDIQPSKFILSPDADKPTKYVIKCLSKVKQEVIVN 76
>Z72510-2|CAA96652.1| 267|Caenorhabditis elegans Hypothetical
protein F53B7.3 protein.
Length = 267
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/62 (30%), Positives = 29/62 (46%)
Frame = +3
Query: 120 YFSYSIKVDEDEFRSARLNLNTKEFKNIEGVNNGFAQTVDQKTHDIYIGGSNGLYKYDYG 299
YF Y +D+++ R L +E KNIE +N FA+ QK +YK +
Sbjct: 161 YFGY---LDDEDGRLIPLEKLIEE-KNIERINKEFAEKQAQKQQTASDAAPENIYKVEED 216
Query: 300 ND 305
+D
Sbjct: 217 DD 218
>Z34801-2|CAD82919.1| 884|Caenorhabditis elegans Hypothetical
protein F59A2.1b protein.
Length = 884
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 51 FETLHEDLDRPFLLAVDHSTNVIYFSYSIKVDEDEFRSARLNLNTKEFKNIE 206
F++L + +D L ++H T V I+ ED F+ +L+T K +E
Sbjct: 26 FDSLIKSMDS---LKIEHQTGVTQLRDDIRRSEDRFQKQLSDLSTNHGKELE 74
>Z34801-1|CAA84330.1| 860|Caenorhabditis elegans Hypothetical
protein F59A2.1a protein.
Length = 860
Score = 27.5 bits (58), Expect = 5.8
Identities = 15/52 (28%), Positives = 26/52 (50%)
Frame = +3
Query: 51 FETLHEDLDRPFLLAVDHSTNVIYFSYSIKVDEDEFRSARLNLNTKEFKNIE 206
F++L + +D L ++H T V I+ ED F+ +L+T K +E
Sbjct: 26 FDSLIKSMDS---LKIEHQTGVTQLRDDIRRSEDRFQKQLSDLSTNHGKELE 74
>U13876-2|AAM48539.1| 373|Caenorhabditis elegans Hypothetical
protein F57B9.7b protein.
Length = 373
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = +3
Query: 96 VDHSTNVIYFSYSIKVDEDEFRSARLNLNTKEFKNIEGVNNGFAQTVD 239
+D+ + + + + DE E + A LNL+++E +++ +T+D
Sbjct: 108 LDNEKSTLLYEVDLLKDELEEKDASLNLSSRECRDLTSEVKALKRTID 155
>U13876-1|AAM48538.1| 353|Caenorhabditis elegans Hypothetical
protein F57B9.7a protein.
Length = 353
Score = 27.1 bits (57), Expect = 7.6
Identities = 11/48 (22%), Positives = 26/48 (54%)
Frame = +3
Query: 96 VDHSTNVIYFSYSIKVDEDEFRSARLNLNTKEFKNIEGVNNGFAQTVD 239
+D+ + + + + DE E + A LNL+++E +++ +T+D
Sbjct: 88 LDNEKSTLLYEVDLLKDELEEKDASLNLSSRECRDLTSEVKALKRTID 135
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,553,655
Number of Sequences: 27780
Number of extensions: 178627
Number of successful extensions: 468
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 467
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 956602620
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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