Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_O05
         (500 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex det...    24   1.0  
DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex det...    24   1.0  
AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase pr...    23   1.4  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   1.4  
Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    23   1.8  
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     23   1.8  
AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase pro...    22   3.1  

>DQ325132-1|ABD14146.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = +3

Query: 183 TKEFKNIEGVNNGFAQTVDQKTHDIYIGGSNGLYKYDYGNDKAEFIGAKDVNIWTIFFKD 362
           +KE K I  ++N +  +     ++ Y    N  Y  +Y N+  +      +NI  I    
Sbjct: 76  SKEPKIISSLSNNYKYS----NYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPVPV 131

Query: 363 VLYYSTFP 386
            +YY  FP
Sbjct: 132 PVYYGNFP 139


>DQ325131-1|ABD14145.1|  189|Apis mellifera complementary sex
           determiner protein.
          Length = 189

 Score = 23.8 bits (49), Expect = 1.0
 Identities = 17/68 (25%), Positives = 29/68 (42%)
 Frame = +3

Query: 183 TKEFKNIEGVNNGFAQTVDQKTHDIYIGGSNGLYKYDYGNDKAEFIGAKDVNIWTIFFKD 362
           +KE K I  ++N +  +     ++ Y    N  Y  +Y N+  +      +NI  I    
Sbjct: 76  SKEPKIISSLSNNYKYS----NYNNYNNNYNNNYNNNYNNNYKKLYKNYIINIEQIPVPV 131

Query: 363 VLYYSTFP 386
            +YY  FP
Sbjct: 132 PVYYGNFP 139


>AY155490-1|AAO12861.1|  342|Apis mellifera Ammar1 transposase
           protein.
          Length = 342

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 12/38 (31%), Positives = 17/38 (44%)
 Frame = +3

Query: 156 FRSARLNLNTKEFKNIEGVNNGFAQTVDQKTHDIYIGG 269
           FRS + +LN K F N + + +   Q    K    Y  G
Sbjct: 284 FRSLQNSLNGKNFNNDDDIKSYLIQFFANKNQKFYERG 321


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 23.4 bits (48), Expect = 1.4
 Identities = 8/21 (38%), Positives = 11/21 (52%)
 Frame = +2

Query: 254 YLYRWKQWLI*IRLWERQSRI 316
           YL +WK W +    WE  S +
Sbjct: 261 YLIKWKNWDLKYNTWEPISNL 281


>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 12/42 (28%), Positives = 24/42 (57%)
 Frame = +3

Query: 63  HEDLDRPFLLAVDHSTNVIYFSYSIKVDEDEFRSARLNLNTK 188
           H+ LDR  +  V  + + +    S+K+ ++  +S R+N NT+
Sbjct: 331 HQSLDRQNIDVVARNEDTLQMVVSMKIKQNVPQSGRVN-NTQ 371


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 23.0 bits (47), Expect = 1.8
 Identities = 10/27 (37%), Positives = 16/27 (59%)
 Frame = +3

Query: 3   ELVECNGIIRNGTYYDFETLHEDLDRP 83
           E++E NG     TY+ F+T+   +D P
Sbjct: 155 EIIERNGDKPPLTYHQFQTVVASMDPP 181



 Score = 21.8 bits (44), Expect = 4.1
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +2

Query: 188 RV*KHRRCKQWIRSNGRPE 244
           R+ +H   K W+ S GRP+
Sbjct: 238 RLERHLERKAWVASFGRPK 256


>AB253415-1|BAE86926.1|  588|Apis mellifera alpha-glucosidase
           protein.
          Length = 588

 Score = 22.2 bits (45), Expect = 3.1
 Identities = 6/22 (27%), Positives = 15/22 (68%)
 Frame = +3

Query: 351 FFKDVLYYSTFPSQFLYTFADG 416
           ++K+ ++Y  +P  F+ + +DG
Sbjct: 24  WWKNAIFYQVYPRSFMDSNSDG 45


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 114,977
Number of Sequences: 438
Number of extensions: 2308
Number of successful extensions: 8
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13741392
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)