Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_O03
(508 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 64 6e-11
Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical pr... 56 2e-08
AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase pro... 54 6e-08
Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical pr... 52 2e-07
Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical p... 46 1e-05
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 46 2e-05
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 40 8e-04
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical p... 39 0.002
Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical pr... 39 0.002
Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical pr... 38 0.004
Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical pr... 37 0.007
Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical pr... 36 0.013
Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical p... 34 0.052
Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical pr... 34 0.052
Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical pr... 34 0.068
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 34 0.068
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 33 0.090
Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical pr... 33 0.12
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 33 0.16
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 31 0.48
U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog (... 30 1.1
U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog (... 30 1.1
AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical ... 29 1.9
AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical ... 29 1.9
Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical pr... 29 2.6
U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five) in... 28 3.4
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 27 5.9
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 27 7.8
AL110490-9|CAB54453.2| 607|Caenorhabditis elegans Hypothetical ... 27 7.8
AF039650-1|AAC14022.3| 607|Caenorhabditis elegans acetylcholine... 27 7.8
AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical ... 27 7.8
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 64.1 bits (149), Expect = 6e-11
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 1/129 (0%)
Frame = +1
Query: 124 CYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRA-HA 300
CY+ + + R+ +A+ +P D P L CTH+L+ + AD +L D A
Sbjct: 57 CYFTNWAQYRQGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEG 114
Query: 301 NYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFD 480
YR + LK QL+ L+ GG + + + S +R F +SA+ +GFD
Sbjct: 115 MYRRVNKLKVTDTQLKTLLSFGGW--SFGTALFQGMAASSASRKVFIDSAITFVRTWGFD 172
Query: 481 GIDLSWQLP 507
GID+ W+ P
Sbjct: 173 GIDIDWEYP 181
>Z70035-8|CAA93868.2| 446|Caenorhabditis elegans Hypothetical
protein R09D1.8 protein.
Length = 446
Score = 55.6 bits (128), Expect = 2e-08
Identities = 35/143 (24%), Positives = 72/143 (50%), Gaps = 1/143 (0%)
Frame = +1
Query: 82 TNHPASPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMV 261
+ +PA+P +++ YY + +Q ++ D +S TH ++ + +D + +
Sbjct: 75 STYPATPGCNKRIIGYYFA------TQTSVITRD---QVSKLTHAVFAFVNMTSDGHLQI 125
Query: 262 SLNENLDIDRAHANYRAITNL-KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAF 438
D D A + + + K+Q PQ++V +++GG+D++ + + +L SP + F
Sbjct: 126 ------DGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPVLSSPDRKKLF 176
Query: 439 TNSALLLAEQYGFDGIDLSWQLP 507
NS + + Y DG+DL W+ P
Sbjct: 177 INSTVSFLQTYDIDGVDLYWKWP 199
>AF026152-1|AAB81847.1| 117|Caenorhabditis elegans chitinase
protein.
Length = 117
Score = 54.0 bits (124), Expect = 6e-08
Identities = 37/117 (31%), Positives = 54/117 (46%), Gaps = 1/117 (0%)
Frame = +1
Query: 151 RESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMVSLNENLDIDRA-HANYRAITNLK 327
R+ +A+ +P D P L CTH+L+ + AD +L D A YR + LK
Sbjct: 5 RQGRAKFVPEDYTPGL--CTHILFAFGWMNADYTVRAYDPADLPNDWAGEGMYRRVNKLK 62
Query: 328 RQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSW 498
QL+ L+ GG + + + S +R F +SA +GFDGIDL W
Sbjct: 63 VTDTQLKTLLSFGGC--SFGTALFQGMAASSASRKVFIDSATTSVRTWGFDGIDLDW 117
>Z70035-7|CAA93867.1| 369|Caenorhabditis elegans Hypothetical
protein R09D1.7 protein.
Length = 369
Score = 52.4 bits (120), Expect = 2e-07
Identities = 24/61 (39%), Positives = 37/61 (60%)
Frame = +1
Query: 325 KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQL 504
K+Q P ++V +++GGDD++ + K +L SP R F N+ + YG DGIDL W+
Sbjct: 65 KQQTPPVKVMISIGGDDNSNNFYK---VLNSPNRRKVFLNATTSFLQIYGIDGIDLFWKW 121
Query: 505 P 507
P
Sbjct: 122 P 122
>Z70035-6|CAA93866.1| 444|Caenorhabditis elegans Hypothetical
protein R09D1.6 protein.
Length = 444
Score = 49.6 bits (113), Expect = 1e-06
Identities = 29/82 (35%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Frame = +1
Query: 274 NLDIDRAHANYRAITNL----KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFT 441
+L ID A R TNL K+Q PQ++V +++GG+D++ + + L SP + F
Sbjct: 120 HLQIDGDLAKNR-FTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPGLSSPDRKKLFI 175
Query: 442 NSALLLAEQYGFDGIDLSWQLP 507
NS + + Y DG+DL W+ P
Sbjct: 176 NSTVSFLQTYDIDGVDLYWKWP 197
>Z70035-12|CAB76726.1| 150|Caenorhabditis elegans Hypothetical
protein R09D1.14 protein.
Length = 150
Score = 46.4 bits (105), Expect = 1e-05
Identities = 32/136 (23%), Positives = 67/136 (49%), Gaps = 1/136 (0%)
Frame = +1
Query: 82 TNHPASPSSQSKVLCYYDSKSYIRESQARMLPTDLEPALSFCTHLLYKSAGIQADTYKMV 261
+ +PA+P +++ YY + +Q ++ +D +S TH ++ I +D +
Sbjct: 33 STYPATPGCNKRIIGYYFA------TQTSVITSD---QVSNLTHAVFAFVNITSDGQLQI 83
Query: 262 SLNENLDIDRAHANYRAITNL-KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAF 438
D D A + + + K+Q PQ++V +++GG+D++ + + +L SP + F
Sbjct: 84 ------DGDLAKNRFTNLIEIAKQQTPQVKVMISIGGNDNSNN---FKPVLSSPDRKKLF 134
Query: 439 TNSALLLAEQYGFDGI 486
NS + + Y DG+
Sbjct: 135 INSTVSFLQTYDIDGV 150
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 45.6 bits (103), Expect = 2e-05
Identities = 21/77 (27%), Positives = 41/77 (53%)
Frame = +1
Query: 277 LDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALL 456
L+ D A A + + + P L++ VGG E+ Q +++L R+ ++ +
Sbjct: 72 LEGDAAKARLEHVKEVASRHPDLKLLYAVGG---WENSQYFSVLTADHSRRSILISNFVK 128
Query: 457 LAEQYGFDGIDLSWQLP 507
+ ++YGFDG+D+ W+ P
Sbjct: 129 VIKEYGFDGVDIDWEYP 145
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 40.3 bits (90), Expect = 8e-04
Identities = 16/57 (28%), Positives = 35/57 (61%)
Frame = +1
Query: 337 PQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 507
P+L++ +++GG ++++ + ++ SP + F NS + ++Y DG+DL W+ P
Sbjct: 142 PKLKMLISIGGPANSDN---FLPVISSPDRKKIFINSIVSFLKKYDIDGVDLFWKWP 195
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 39.9 bits (89), Expect = 0.001
Identities = 18/55 (32%), Positives = 32/55 (58%)
Frame = +1
Query: 343 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 507
+++ +++GG E+ Q ++ ++ES R F NS L ++ DGIDL W+ P
Sbjct: 134 VKIMISIGGK---ENSQNFSPVIESEYRRQIFINSILTFLKENDLDGIDLFWEWP 185
>Z54342-15|CAK55172.1| 465|Caenorhabditis elegans Hypothetical
protein C08H9.4b protein.
Length = 465
Score = 38.7 bits (86), Expect = 0.002
Identities = 17/64 (26%), Positives = 36/64 (56%)
Frame = +1
Query: 316 TNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLS 495
+N + L++ +++GG ++ + ++ L+ + +RT F NS + E+Y DGI++
Sbjct: 170 SNAREASSTLKIMISIGGHYNS---RSFSGLVFNETSRTVFVNSIVSFVEKYDIDGIEMF 226
Query: 496 WQLP 507
W P
Sbjct: 227 WMWP 230
>Z54342-5|CAA91147.1| 457|Caenorhabditis elegans Hypothetical
protein C08H9.10 protein.
Length = 457
Score = 38.7 bits (86), Expect = 0.002
Identities = 18/75 (24%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Frame = +1
Query: 286 DRAHANYRAITNLKRQFPQ-LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLA 462
+R+ + + N R+ L+V +++GG ++ + ++ L+ + +R F NS +
Sbjct: 152 ERSRRKFEEMKNEARKANSTLKVMISIGGQSNS---RSFSRLVSNETSRNVFVNSIVSFV 208
Query: 463 EQYGFDGIDLSWQLP 507
++Y DGI++ W P
Sbjct: 209 QKYDIDGIEIFWTWP 223
>Z54342-7|CAA91149.1| 460|Caenorhabditis elegans Hypothetical
protein C08H9.12 protein.
Length = 460
Score = 37.9 bits (84), Expect = 0.004
Identities = 16/61 (26%), Positives = 33/61 (54%)
Frame = +1
Query: 325 KRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQL 504
+++ L+V +++GG + + ++ L+ +R FTNS + + Y DG+D+ W
Sbjct: 168 RKESSTLKVMISIGGQYSSGE---FSGLVSKETSRNLFTNSIVSFVQNYDIDGVDIFWTW 224
Query: 505 P 507
P
Sbjct: 225 P 225
>Z49913-6|CAA90145.2| 460|Caenorhabditis elegans Hypothetical
protein ZK938.6 protein.
Length = 460
Score = 37.1 bits (82), Expect = 0.007
Identities = 16/63 (25%), Positives = 33/63 (52%)
Frame = +1
Query: 319 NLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSW 498
N+++ L+V +++GG ++ + ++ L+ + +R F NS Y DG+D+ W
Sbjct: 166 NVRKASSTLKVMISIGGQYNSGE---FSGLVSNETSRNLFVNSIATFVRDYDIDGVDIFW 222
Query: 499 QLP 507
P
Sbjct: 223 TWP 225
>Z47745-2|CAA87664.1| 407|Caenorhabditis elegans Hypothetical
protein T19H5.3 protein.
Length = 407
Score = 36.3 bits (80), Expect = 0.013
Identities = 17/82 (20%), Positives = 41/82 (50%), Gaps = 1/82 (1%)
Frame = +1
Query: 259 VSLNENLDIDRAHANYRAITNLKR-QFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTA 435
+ + ++++D + + + + + + L++GG +T Q L++ P+ +
Sbjct: 111 IGFDGSVEVDHSSRTFSKLKEKSKIESSHFKKLLSIGGRSNT---QFLPLVIADPRRKRR 167
Query: 436 FTNSALLLAEQYGFDGIDLSWQ 501
F S + + E+Y DG+DL W+
Sbjct: 168 FFKSIISILEEYQLDGVDLLWK 189
>Z70035-13|CAA93874.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +1
Query: 340 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 507
++++ ++GG D+++ ++ ++ S + F S L E Y DG+DL W+ P
Sbjct: 135 KIKLMFSIGGKDNSK---YFSSVIPSEERIQTFIESILEFLEAYDLDGVDLFWKWP 187
>Z47745-6|CAA87667.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.11 protein.
Length = 432
Score = 34.3 bits (75), Expect = 0.052
Identities = 15/56 (26%), Positives = 31/56 (55%)
Frame = +1
Query: 340 QLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 507
++++ ++GG D+++ ++ ++ S + F S L E Y DG+DL W+ P
Sbjct: 135 KIKLMFSIGGKDNSK---YFSSVIPSEERIQTFIESILEFLEAYDLDGVDLFWKWP 187
>Z70035-3|CAA93863.1| 435|Caenorhabditis elegans Hypothetical
protein R09D1.3 protein.
Length = 435
Score = 33.9 bits (74), Expect = 0.068
Identities = 14/55 (25%), Positives = 30/55 (54%)
Frame = +1
Query: 343 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 507
L++ ++GGD+++ D ++ L + Q ++ S + + DG+DL W+ P
Sbjct: 139 LKLMFSIGGDENSFD---FSSALANTQMKSTLITSIIAFIHSHMIDGVDLHWKWP 190
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 33.9 bits (74), Expect = 0.068
Identities = 13/52 (25%), Positives = 31/52 (59%)
Frame = +1
Query: 346 RVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 501
++ ++GG +T Q ++ ++++ + + F +S + +QY DG+DL W+
Sbjct: 150 KIMFSIGGPANT---QFFSPIIQNEEMKRKFIDSIIYFLKQYKLDGVDLFWK 198
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 33.5 bits (73), Expect = 0.090
Identities = 17/55 (30%), Positives = 27/55 (49%)
Frame = +1
Query: 343 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 507
+RV VGG D++ Q ++ + R F +S E + DG+DL W+ P
Sbjct: 1030 VRVLFAVGGWDNS---QYFSSVAADSGKRRNFVDSVASFIEHHKIDGVDLDWEYP 1081
>Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.13 protein.
Length = 459
Score = 33.1 bits (72), Expect = 0.12
Identities = 16/63 (25%), Positives = 30/63 (47%)
Frame = +1
Query: 319 NLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSW 498
N K Q ++V ++GG + E Y+ ++ R+ F +S + + G+DL W
Sbjct: 156 NRKAQLMNVKVMFSIGGHKNAEH---YSTVVADSTKRSVFIDSIVSFIKSNNASGVDLFW 212
Query: 499 QLP 507
+ P
Sbjct: 213 EWP 215
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 32.7 bits (71), Expect = 0.16
Identities = 17/55 (30%), Positives = 26/55 (47%)
Frame = +1
Query: 343 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQLP 507
+RV VGG D++ Q ++ + R F +S E DG+DL W+ P
Sbjct: 1567 VRVLFAVGGWDNS---QYFSSVAADSGKRKKFVDSIASFVEDQKIDGVDLDWEYP 1618
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical
protein C25A8.4 protein.
Length = 1067
Score = 31.1 bits (67), Expect = 0.48
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 4/80 (5%)
Frame = +1
Query: 160 QARMLPTDLEPALSFCTHLLYKSAGIQADT----YKMVSLNENLDIDRAHANYRAITNLK 327
+ R+ P L+ ++ CTHL+Y S I DT Y + + DID N R L+
Sbjct: 37 KTRLSPNLLQN-ITTCTHLVYGSIPIDRDTGYPQYSVSDVESGYDID----NIRTFMRLR 91
Query: 328 RQFPQLRVFLTVGGDDDTED 387
+ P ++ + V ED
Sbjct: 92 KYHPNAKLLMGVVRTKPFED 111
>U97407-3|AAM15558.1| 1069|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform b protein.
Length = 1069
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1
Query: 202 FCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDT 381
F +L K GI A YK+VSLN L++ + A N R+ +F + DDD
Sbjct: 511 FSRYLHTKQRGIPAKVYKVVSLNSCLEVCAGNPTC-AGANYNRRLGDCTLFDAI--DDDA 567
Query: 382 E 384
E
Sbjct: 568 E 568
>U97407-2|AAB52479.2| 1065|Caenorhabditis elegans Nompa homolog
(drosophila nompa:no mechanoreceptor potential a)
protein 1, isoform a protein.
Length = 1065
Score = 29.9 bits (64), Expect = 1.1
Identities = 21/61 (34%), Positives = 29/61 (47%)
Frame = +1
Query: 202 FCTHLLYKSAGIQADTYKMVSLNENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDT 381
F +L K GI A YK+VSLN L++ + A N R+ +F + DDD
Sbjct: 507 FSRYLHTKQRGIPAKVYKVVSLNSCLEVCAGNPTC-AGANYNRRLGDCTLFDAI--DDDA 563
Query: 382 E 384
E
Sbjct: 564 E 564
>AL132862-5|CAB70227.1| 419|Caenorhabditis elegans Hypothetical
protein Y73F8A.9 protein.
Length = 419
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 247 CQLGCRQICTADGCRTKEQAPSP 179
CQ C+Q C C T+ AP+P
Sbjct: 103 CQSSCQQTCQTSSCYTQIAAPAP 125
>AL132862-4|CAB60533.1| 420|Caenorhabditis elegans Hypothetical
protein Y73F8A.8 protein.
Length = 420
Score = 29.1 bits (62), Expect = 1.9
Identities = 10/23 (43%), Positives = 13/23 (56%)
Frame = -1
Query: 247 CQLGCRQICTADGCRTKEQAPSP 179
CQ C+Q C C T+ AP+P
Sbjct: 104 CQSSCQQTCQTSSCYTQIAAPAP 126
>Z81460-3|CAB03829.1| 1228|Caenorhabditis elegans Hypothetical
protein C04A11.3 protein.
Length = 1228
Score = 28.7 bits (61), Expect = 2.6
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -3
Query: 488 SIPSKPYCSARRRAELVKAVRACGDSNKRLYFCGSSVSSSPPT 360
S P+K S +RAE ++VR G SN + SS + PT
Sbjct: 675 STPTKTRASPPKRAESNQSVRTSGSSNSVVQHSASSSTDYVPT 717
>U64862-5|AAQ91890.1| 2350|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform d protein.
Length = 2350
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 268 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 417
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1780 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1829
>U64862-4|AAZ32792.1| 2117|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform b protein.
Length = 2117
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 268 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 417
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1853 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1902
>U64862-3|AAM69078.1| 2396|Caenorhabditis elegans Lin-5 (five)
interacting proteinprotein 1, isoform a protein.
Length = 2396
Score = 28.3 bits (60), Expect = 3.4
Identities = 14/50 (28%), Positives = 23/50 (46%)
Frame = +1
Query: 268 NENLDIDRAHANYRAITNLKRQFPQLRVFLTVGGDDDTEDPQKYNLLLES 417
N D+D AH + R++ + + Q+ R L + D KY L + S
Sbjct: 1853 NLRTDLDNAHTDIRSLRDKEEQWDSSRFQLETKMRESDSDTNKYQLQIAS 1902
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 27.5 bits (58), Expect = 5.9
Identities = 12/53 (22%), Positives = 28/53 (52%)
Frame = +1
Query: 343 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 501
++ +++GG D + + + ++ + R F S + L ++ DG+DL W+
Sbjct: 11 VKKMISIGGCDYSTN---FTSVVSNQTIRRVFIESIIALLIEHNLDGVDLFWR 60
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 27.1 bits (57), Expect = 7.8
Identities = 12/53 (22%), Positives = 26/53 (49%)
Frame = +1
Query: 343 LRVFLTVGGDDDTEDPQKYNLLLESPQARTAFTNSALLLAEQYGFDGIDLSWQ 501
+++ +++GGD E+ Q ++ +L F S + DG+D+ W+
Sbjct: 155 VKIMISIGGD---ENSQYFSSVLSDITMCKLFIESIIAFIHTNSIDGMDIHWK 204
>AL110490-9|CAB54453.2| 607|Caenorhabditis elegans Hypothetical
protein Y48B6A.8 protein.
Length = 607
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 269 LSETILYVSAWMPADLYS 216
+SE LYV+ W PAD Y+
Sbjct: 116 VSEDCLYVNIWAPADAYN 133
>AF039650-1|AAC14022.3| 607|Caenorhabditis elegans
acetylcholinesterase protein.
Length = 607
Score = 27.1 bits (57), Expect = 7.8
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -3
Query: 269 LSETILYVSAWMPADLYS 216
+SE LYV+ W PAD Y+
Sbjct: 116 VSEDCLYVNIWAPADAYN 133
>AC006696-8|AAF39989.1| 120|Caenorhabditis elegans Hypothetical
protein W08E12.2 protein.
Length = 120
Score = 27.1 bits (57), Expect = 7.8
Identities = 14/40 (35%), Positives = 19/40 (47%)
Frame = -1
Query: 223 CTADGCRTKEQAPSP*AAYVLEIL*YSSCCHSSRGLCFGY 104
C+ + C AP +Y YSSCC+S+ C GY
Sbjct: 65 CSCNPCNGGGCAPR--CSYCPNNFGYSSCCNSNNFSCCGY 102
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,900,085
Number of Sequences: 27780
Number of extensions: 211553
Number of successful extensions: 646
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 616
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 642
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -