Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_N19
         (420 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-lik...   115   2e-28
AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.            27   0.11 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   4.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   4.3  
AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein pr...    21   5.6  
AF388659-1|AAK71995.1|  782|Apis mellifera 1D-myo-inositol-trisp...    21   7.5  
DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.               20   9.9  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    20   9.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              20   9.9  

>AF134818-1|AAD40234.1|  130|Apis mellifera lambda crystallin-like
           protein protein.
          Length = 130

 Score =  115 bits (277), Expect = 2e-28
 Identities = 54/86 (62%), Positives = 62/86 (72%)
 Frame = +2

Query: 128 LSREIDGFVLNRIQYAILGEVWRLVDEXXXXXXXXXXXXSEGLGMRYAFLGSLETAHLNA 307
           L+REIDGFVLNRIQYAIL E WRLV +            SEGLGMRYAFLG+ E AHLNA
Sbjct: 1   LTREIDGFVLNRIQYAILNEAWRLVADGILNAKDVDAVMSEGLGMRYAFLGAFEAAHLNA 60

Query: 308 EGMDNYIDRYGETIHNVSNTFGPIPK 385
           EGM  Y + Y  +I++VS TFGP+PK
Sbjct: 61  EGMKKYCETYKNSIYDVSMTFGPVPK 86


>AB022908-1|BAA86909.1|  493|Apis mellifera amylase protein.
          Length = 493

 Score = 26.6 bits (56), Expect = 0.11
 Identities = 10/27 (37%), Positives = 15/27 (55%)
 Frame = -3

Query: 118 LLAYFFHDSSCFLSHFWFCPRRWNYLY 38
           +L+   HD+ C  S+ W C  RW  +Y
Sbjct: 364 ILSPSIHDNIC--SNGWICEHRWRQIY 388


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = +2

Query: 2    SHPVNPPYYVPLVEIVPA-PWTKPEVTKKTRAIMEEIGQEPVTLSRE--IDGFVLNRIQY 172
            S P++ P     +E VP+ P         T   ++   Q P        I G+ L+    
Sbjct: 1095 SGPLSEPLLTQTMEDVPSIPPEDVRCAALTSQSLQVSWQPPPNTHSNGIIQGYKLH--YE 1152

Query: 173  AILGEVWRLVDE 208
             IL ++WR VDE
Sbjct: 1153 PILADMWRSVDE 1164


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.4 bits (43), Expect = 4.3
 Identities = 20/72 (27%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
 Frame = +2

Query: 2    SHPVNPPYYVPLVEIVPA-PWTKPEVTKKTRAIMEEIGQEPVTLSRE--IDGFVLNRIQY 172
            S P++ P     +E VP+ P         T   ++   Q P        I G+ L+    
Sbjct: 1091 SGPLSEPLLTQTMEDVPSIPPEDVRCAALTSQSLQVSWQPPPNTHSNGIIQGYKLH--YE 1148

Query: 173  AILGEVWRLVDE 208
             IL ++WR VDE
Sbjct: 1149 PILADMWRSVDE 1160


>AF388659-4|AAK71996.1| 1308|Apis mellifera NFRKB-like protein
           protein.
          Length = 1308

 Score = 21.0 bits (42), Expect = 5.6
 Identities = 8/12 (66%), Positives = 10/12 (83%)
 Frame = +1

Query: 361 QYIRPYTENDNK 396
           QYIR  TE+D+K
Sbjct: 687 QYIREQTESDDK 698


>AF388659-1|AAK71995.1|  782|Apis mellifera
           1D-myo-inositol-trisphosphate 3-kinaseisoform A protein.
          Length = 782

 Score = 20.6 bits (41), Expect = 7.5
 Identities = 7/16 (43%), Positives = 11/16 (68%)
 Frame = -3

Query: 385 FRYRAECIANIMNRLA 338
           FR  A C++ I NR++
Sbjct: 26  FRISAGCVSRISNRIS 41


>DQ342041-1|ABC69933.1|  828|Apis mellifera STIP protein.
          Length = 828

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 4/8 (50%), Positives = 8/8 (100%)
 Frame = -3

Query: 55  RWNYLYKW 32
           +WN++Y+W
Sbjct: 626 QWNWVYEW 633


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = -3

Query: 418 AYCFSALICCHF 383
           A+CF+   CC F
Sbjct: 741 AHCFALCHCCDF 752


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 20.2 bits (40), Expect = 9.9
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +2

Query: 2    SHPVNPPYYVPLVEIVPAPWTKPEVTKKTRA 94
            S+ V P     ++++VPA W    VT    A
Sbjct: 1510 SNNVKPGGNFVVLDLVPATWYHLRVTAHNNA 1540


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,463
Number of Sequences: 438
Number of extensions: 2183
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 10750329
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)