Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_N18
(416 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCP31B10.07 |eft202||translation elongation factor 2 |Schizosac... 207 5e-55
SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation elon... 207 5e-55
SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyce... 126 1e-30
SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Ma... 32 0.041
SPBC8D2.01 |gsk31||serine/threonine protein kinase Gsk31|Schizos... 27 0.88
SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3 |Schiz... 27 1.2
SPBP23A10.13 |orc4|orp4|origin recognition complex subunit Orc4|... 27 1.5
SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|c... 26 2.0
SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces pombe... 26 2.7
SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+, L-... 25 3.6
SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual 25 4.7
SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase Cdc48|Schizosac... 25 4.7
SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit Swi2|Schizo... 25 6.2
SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr 1|||M... 25 6.2
SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like |Schizosacch... 24 8.2
SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|... 24 8.2
SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-gluca... 24 8.2
>SPCP31B10.07 |eft202||translation elongation factor 2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 842
Score = 207 bits (506), Expect = 5e-55
Identities = 94/135 (69%), Positives = 109/135 (80%)
Frame = +1
Query: 10 LSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWC 189
LSKSPNKHNR+FM A+PM E L I+ G VNPRDDFK RAR ++D++ +D+T+ARKIWC
Sbjct: 576 LSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWC 635
Query: 190 FGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAEENLRGVRFNIYDVTLHT 369
FGP+ TG N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR RFNI DV LH
Sbjct: 636 FGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHA 695
Query: 370 DAIHRGGGQIIPTTR 414
DAIHRGGGQIIPT R
Sbjct: 696 DAIHRGGGQIIPTAR 710
>SPAC513.01c |eft201|eft2-1, etf2, SPAPYUK71.04c|translation
elongation factor 2 |Schizosaccharomyces pombe|chr
1|||Manual
Length = 842
Score = 207 bits (506), Expect = 5e-55
Identities = 94/135 (69%), Positives = 109/135 (80%)
Frame = +1
Query: 10 LSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWC 189
LSKSPNKHNR+FM A+PM E L I+ G VNPRDDFK RAR ++D++ +D+T+ARKIWC
Sbjct: 576 LSKSPNKHNRIFMTAEPMSEELSVAIETGHVNPRDDFKVRARIMADEFGWDVTDARKIWC 635
Query: 190 FGPEGTGPNILVDCSKGVQYLNEIKDSVVAGFQWAAKEGAMAEENLRGVRFNIYDVTLHT 369
FGP+ TG N++VD +K V YLNEIKDSVVA F WA+KEG M EENLR RFNI DV LH
Sbjct: 636 FGPDTTGANVVVDQTKAVAYLNEIKDSVVAAFAWASKEGPMFEENLRSCRFNILDVVLHA 695
Query: 370 DAIHRGGGQIIPTTR 414
DAIHRGGGQIIPT R
Sbjct: 696 DAIHRGGGQIIPTAR 710
>SPBC215.12 |cwf10|spef2, snu114|GTPase Cwf10 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 983
Score = 126 bits (304), Expect = 1e-30
Identities = 58/140 (41%), Positives = 83/140 (59%), Gaps = 4/140 (2%)
Frame = +1
Query: 7 CLSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIW 186
C S +PNK NR+ M +P+ +G+ DI++GKVN K + + Y++DL +R IW
Sbjct: 687 CFSDTPNKKNRITMVVEPLEKGISNDIENGKVNINWPQKRISEFFQKNYDWDLLASRSIW 746
Query: 187 CFGPEGTGPNILVDCSKGV----QYLNEIKDSVVAGFQWAAKEGAMAEENLRGVRFNIYD 354
FGP+ G NIL D + LN +K+ + GFQW +EG + +E +R V F + D
Sbjct: 747 AFGPDDRGTNILRDDTLSTDVDKNVLNSVKEYIKQGFQWGTREGPLCDETIRNVNFRLMD 806
Query: 355 VTLHTDAIHRGGGQIIPTTR 414
V L + I+RGGGQIIPT R
Sbjct: 807 VVLAPEQIYRGGGQIIPTAR 826
>SPCC553.08c |||GTPase Ria1 |Schizosaccharomyces pombe|chr 3|||Manual
Length = 1000
Score = 31.9 bits (69), Expect = 0.041
Identities = 32/137 (23%), Positives = 61/137 (44%), Gaps = 15/137 (10%)
Frame = +1
Query: 10 LSKSPNKHNRLFMKAQPMPEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK--- 180
+S + +K NR + ++ + + + E + K F R L ++ DL E +
Sbjct: 696 VSSNFSKKNRNVVVSESLTKSMEEVLTPEK------FYERLSKLLEEENSDLGELKNHLD 749
Query: 181 -IWCFGPEGTGPNILVDCSKGVQYL-----------NEIKDSVVAGFQWAAKEGAMAEEN 324
I FGP+ GPNIL D +K ++ +++ + VV FQ +G + E
Sbjct: 750 SIIAFGPKRVGPNILFDKTKKMRDFRRQSDETKLIPSDLSEYVVTAFQLITHQGPLCAEP 809
Query: 325 LRGVRFNIYDVTLHTDA 375
++G+ +I + D+
Sbjct: 810 VQGICVSIDQFDISDDS 826
>SPBC8D2.01 |gsk31||serine/threonine protein kinase
Gsk31|Schizosaccharomyces pombe|chr 2|||Manual
Length = 381
Score = 27.5 bits (58), Expect = 0.88
Identities = 11/23 (47%), Positives = 15/23 (65%)
Frame = -3
Query: 303 FLGGPLEPGDDRVLDLVQVLHTL 235
F+G PL PGD V LV+++ L
Sbjct: 220 FIGRPLFPGDSSVEQLVEIIRVL 242
>SPBC36.07 |iki3||RNA polymerase II elongator subunit Iki3
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1253
Score = 27.1 bits (57), Expect = 1.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +1
Query: 73 LPEDIDDGKVNPRDDFKTRARYLSDKYEYDLTEARK 180
LPE ID+GK++ DD KT + D + K
Sbjct: 194 LPEKIDEGKLSDVDDGKTYICWRGDSQYVSINRLEK 229
>SPBP23A10.13 |orc4|orp4|origin recognition complex subunit
Orc4|Schizosaccharomyces pombe|chr 2|||Manual
Length = 972
Score = 26.6 bits (56), Expect = 1.5
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Frame = +1
Query: 163 LTEARKIWCFGPEGTGPNILVD--CSKGVQYLNE 258
L E + GP G+G ++LVD S+ Q +NE
Sbjct: 572 LGEGNSVIIVGPRGSGKSVLVDDILSRAAQEINE 605
>SPAC24H6.13 |||DUF221 family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 871
Score = 26.2 bits (55), Expect = 2.0
Identities = 10/22 (45%), Positives = 15/22 (68%)
Frame = +1
Query: 10 LSKSPNKHNRLFMKAQPMPEGL 75
++KS KHN+L K +P+P L
Sbjct: 243 INKSVKKHNKLVKKHKPLPSTL 264
>SPBC119.08 |pmk1|spm1|MAP kinase Pmk1 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 422
Score = 25.8 bits (54), Expect = 2.7
Identities = 17/44 (38%), Positives = 21/44 (47%), Gaps = 1/44 (2%)
Frame = -3
Query: 300 LGG-PLEPGDDRVLDLVQVLHTLRAVDEDVRSGALGAEAPDLTR 172
LGG PL G D V L +LH L DE+ S + A + R
Sbjct: 223 LGGTPLFKGKDFVHQLNLILHQLGTPDEETLSHISSSRAQEYVR 266
>SPAC227.18 |lys3|SPAC2F7.01|saccharopine dehydrogenase [NAD+,
L-lysine forming] |Schizosaccharomyces pombe|chr
1|||Manual
Length = 368
Score = 25.4 bits (53), Expect = 3.6
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 410 VVGMI*PPPL*MASV*RVTS*MLNRTPLKFSSAMAPSLAA 291
V G+ PPPL + S+ + + + + FS A+ PSL A
Sbjct: 305 VKGVTTPPPLEVISIDHLPTLLPRESSEAFSEALIPSLLA 344
>SPBC646.04 |pla1||poly|Schizosaccharomyces pombe|chr 2|||Manual
Length = 566
Score = 25.0 bits (52), Expect = 4.7
Identities = 9/18 (50%), Positives = 11/18 (61%)
Frame = -1
Query: 77 GRPSGMGWAFMKRRLCLL 24
G P G+ WA M R+C L
Sbjct: 228 GFPGGVAWAMMVARICQL 245
>SPAC1565.08 |cdc48|SPAC6F12.01|AAA family ATPase
Cdc48|Schizosaccharomyces pombe|chr 1|||Manual
Length = 815
Score = 25.0 bits (52), Expect = 4.7
Identities = 11/46 (23%), Positives = 22/46 (47%)
Frame = +1
Query: 85 IDDGKVNPRDDFKTRARYLSDKYEYDLTEARKIWCFGPEGTGPNIL 222
+++ K R+ + Y + +T ++ + FGP GTG +L
Sbjct: 502 LEEVKRELRETVQMPVMYAEKFLRFGVTPSKGVLFFGPPGTGKTLL 547
>SPAC1142.03c |swi2|SPAC17G6.20c|Swi5 complex subunit
Swi2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 722
Score = 24.6 bits (51), Expect = 6.2
Identities = 11/35 (31%), Positives = 17/35 (48%)
Frame = +1
Query: 64 PEGLPEDIDDGKVNPRDDFKTRARYLSDKYEYDLT 168
P G+ +D D+ +N + T S K+ YD T
Sbjct: 386 PYGVDQDFDETCINESEQQATHIPNSSIKFNYDYT 420
>SPAC11D3.15 |||oxoprolinase |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1317
Score = 24.6 bits (51), Expect = 6.2
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = +1
Query: 247 YLNEIKDSVVAGFQWAAKEGAMAEENLRGVR 339
YL+ + +AGFQ G ++N +GVR
Sbjct: 248 YLSPVVRRYLAGFQSGFLHGLKTKDNSKGVR 278
>SPAC17H9.02 |||ATP-dependent RNA helicase Mtr4-like
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1030
Score = 24.2 bits (50), Expect = 8.2
Identities = 10/25 (40%), Positives = 13/25 (52%)
Frame = +2
Query: 338 DSTFMTSPFTLTPFTEVAVKSFQRL 412
D T PF L PF A+K +R+
Sbjct: 116 DPPAKTYPFELDPFQSTAIKCVERM 140
>SPBC32F12.04 |tug1|gtb1|gamma-tubulin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 446
Score = 24.2 bits (50), Expect = 8.2
Identities = 13/28 (46%), Positives = 18/28 (64%)
Frame = -1
Query: 116 SSRGFTLPSSISSGRPSGMGWAFMKRRL 33
S GF+L SI+ G SG+G +F+ RL
Sbjct: 131 SLEGFSLLHSIAGGTGSGLG-SFLLERL 157
>SPCC1281.01 |ags1|mok1, SPCC338.01c, SPCC17A7.01|alpha-1,4-glucan
synthase Ags1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 2410
Score = 24.2 bits (50), Expect = 8.2
Identities = 12/52 (23%), Positives = 24/52 (46%), Gaps = 5/52 (9%)
Frame = -3
Query: 402 NDLTATSVNGVSVKGDVINVESNPSQVL-----LGHGAFLGGPLEPGDDRVL 262
+ + T+ NG+ + D +N+ + + L H F G +E G R++
Sbjct: 427 SSVLTTAWNGIQINEDAVNINTGTVEPLHMYGVANHDVFRWGAIENGTARLI 478
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,352,675
Number of Sequences: 5004
Number of extensions: 23549
Number of successful extensions: 84
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 83
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 83
length of database: 2,362,478
effective HSP length: 66
effective length of database: 2,032,214
effective search space used: 146319408
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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