Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_N10
(519 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 38 7e-04
SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|... 36 0.003
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.015
SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces ... 34 0.015
SPCC1795.08c |||histone acetyltransferase complex subunit |Schiz... 32 0.045
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 32 0.059
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 30 0.24
SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|... 29 0.32
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.32
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 28 0.96
SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr 3... 28 0.96
SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces po... 27 1.3
SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1 |S... 27 1.7
SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyc... 27 2.2
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 2.9
SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7 |S... 26 2.9
SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr 1||... 26 3.9
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 3.9
SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces... 26 3.9
SPCC126.15c |sec65||signal recognition particle subunit Sec65 |S... 25 6.8
SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces pom... 25 6.8
SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces pomb... 25 6.8
SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting pro... 25 6.8
SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|ch... 25 6.8
SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin homolog|Sc... 25 6.8
SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|... 25 9.0
SPCC584.04 |sup35|erf3|translation release factor eRF3 |Schizosa... 25 9.0
SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyce... 25 9.0
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 38.3 bits (85), Expect = 7e-04
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 6/103 (5%)
Frame = +2
Query: 56 SAITESQAKPPLLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTET 235
S IT S +PP A E V P P+A +VPSA P + +
Sbjct: 508 SVITPSVPQPPA--APVVPEAPSVHQPPAAPVAP--EVPSAPQRPAAPVVPEAPSVPQRP 563
Query: 236 SAPIEPVA-EIPK-----VAESVQTVPTLPIAPLVCPIKSTPE 346
+ P+ P A +P+ VA V +VP P+AP+V S P+
Sbjct: 564 AVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQ 606
Score = 37.5 bits (83), Expect = 0.001
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 10/93 (10%)
Frame = +2
Query: 98 AKEKSETTVVTSAPVEPIAKPIKVPSADTA--PPVEPIEKELKEKTET-SAPIEPVAE-- 262
+++ ++ +V+T + +P A P+ VP A + PP P+ E+ + +AP+ P A
Sbjct: 501 SQKAAQPSVITPSVPQPPAAPV-VPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSV 559
Query: 263 -----IPKVAESVQTVPTLPIAPLVCPIKSTPE 346
+P V E++ +VP P+AP+ + S P+
Sbjct: 560 PQRPAVPVVPEAL-SVPQPPVAPVAPEVPSVPQ 591
Score = 35.9 bits (79), Expect = 0.004
Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 8/114 (7%)
Frame = +2
Query: 125 VTSAPVEPIAKPI-KVPSADTAPPVEPIEKELKEKTETSAPIEP-VAEIPK-----VAES 283
V SAP P A + + PS P V + + L AP+ P V +P+ V
Sbjct: 541 VPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQPPVAPVAPEVPSVPQPPVAPVVPE 600
Query: 284 VQTVPTLPIAPLVCPIKSTPEKXXXXXXXXXXXXLANTPSKEEIPDV-SAPKCP 442
+VP P+AP+ + S P++ + P+ +P+V S P+ P
Sbjct: 601 APSVPQPPVAPVAPEVPSVPQR-PAVPVVPEAPSVPQPPAAPVVPEVPSVPQRP 653
Score = 34.7 bits (76), Expect = 0.008
Identities = 27/78 (34%), Positives = 34/78 (43%)
Frame = +2
Query: 113 ETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEPVAEIPKVAESVQT 292
E V PV P+A +VPS PPV P+ E AP P + VA V +
Sbjct: 570 EALSVPQPPVAPVAP--EVPSVPQ-PPVAPVVPE--------APSVPQPPVAPVAPEVPS 618
Query: 293 VPTLPIAPLVCPIKSTPE 346
VP P P+V S P+
Sbjct: 619 VPQRPAVPVVPEAPSVPQ 636
Score = 34.7 bits (76), Expect = 0.008
Identities = 29/98 (29%), Positives = 43/98 (43%), Gaps = 6/98 (6%)
Frame = +2
Query: 71 SQAKPPLLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAPIE 250
S +PP+ A E V PV P+A +VPS P V + + +AP+
Sbjct: 588 SVPQPPV--APVVPEAPSVPQPPVAPVAP--EVPSVPQRPAVPVVPEAPSVPQPPAAPVV 643
Query: 251 P-VAEIPK-----VAESVQTVPTLPIAPLVCPIKSTPE 346
P V +P+ V +VP P AP+V + S P+
Sbjct: 644 PEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQ 681
Score = 33.9 bits (74), Expect = 0.015
Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 7/81 (8%)
Frame = +2
Query: 125 VTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSA-PIEPVA-EIPK-----VAES 283
V S P P+A + + PPV P+ E+ + A P+ P A +P+ V
Sbjct: 586 VPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPE 645
Query: 284 VQTVPTLPIAPLVCPIKSTPE 346
V +VP P P+V S P+
Sbjct: 646 VPSVPQRPAVPVVPEAPSVPQ 666
Score = 28.3 bits (60), Expect = 0.73
Identities = 23/86 (26%), Positives = 33/86 (38%), Gaps = 2/86 (2%)
Frame = +2
Query: 71 SQAKPPLLE-AKEKSETTVVTSAPVEPIAKPI-KVPSADTAPPVEPIEKELKEKTETSAP 244
S +PP+ A E + PV P A + + P+A P V + + AP
Sbjct: 603 SVPQPPVAPVAPEVPSVPQRPAVPVVPEAPSVPQPPAAPVVPEVPSVPQRPAVPVVPEAP 662
Query: 245 IEPVAEIPKVAESVQTVPTLPIAPLV 322
P V V +VP P P+V
Sbjct: 663 SVPQPPAAPVVPEVPSVPQPPAVPVV 688
>SPBC56F2.05c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 397
Score = 36.3 bits (80), Expect = 0.003
Identities = 20/92 (21%), Positives = 43/92 (46%)
Frame = +2
Query: 65 TESQAKPPLLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAP 244
T+S + PP+L + ++S ++ T PV+ +P+ +P AP E ++
Sbjct: 150 TKSCSIPPILNSSDRSPLSLPTPYPVQYSTQPVSLPQPIAAPAPPSAESSKSTISDEDVA 209
Query: 245 IEPVAEIPKVAESVQTVPTLPIAPLVCPIKST 340
+ + + SV++ P+ + P++ST
Sbjct: 210 WQLIRLGALSSNSVKSSPSKSFVSISSPVQST 241
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.9 bits (74), Expect = 0.015
Identities = 29/86 (33%), Positives = 32/86 (37%), Gaps = 2/86 (2%)
Frame = +2
Query: 77 AKPPLLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEP- 253
A PPL A S V T + P A P PS APP P+ SAPI P
Sbjct: 402 ALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPS---APPSLPMGAPAAPPLPPSAPIAPP 458
Query: 254 -VAEIPKVAESVQTVPTLPIAPLVCP 328
A +P P P AP P
Sbjct: 459 LPAGMPAAPPLPPAAPAPPPAPAPAP 484
Score = 32.7 bits (71), Expect = 0.034
Identities = 18/61 (29%), Positives = 26/61 (42%)
Frame = +2
Query: 137 PVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEPVAEIPKVAESVQTVPTLPIAP 316
P P + P+ P+A PP PI L + P+ P A P A + P P+A
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPA--PAPAAPVAS 490
Query: 317 L 319
+
Sbjct: 491 I 491
>SPCC1281.02c |spf30||splicing factor Spf30 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 311
Score = 33.9 bits (74), Expect = 0.015
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Frame = +2
Query: 113 ETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEPVAEIPKVAESVQT 292
++T + S PV K I V S T+P + ++A V+ I VA+ V T
Sbjct: 149 KSTTIRSTPVREPTKAISVASMSTSPSNYASRASSPDMKSSAAVTANVSPIQNVAQHVST 208
Query: 293 VPTL-PIAP 316
+P + PI P
Sbjct: 209 LPKISPIPP 217
>SPCC1795.08c |||histone acetyltransferase complex subunit
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 985
Score = 32.3 bits (70), Expect = 0.045
Identities = 22/69 (31%), Positives = 35/69 (50%)
Frame = +2
Query: 89 LLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEPVAEIP 268
++EA EK V + KP++V + D E +KE+ E TE +AP VAE+
Sbjct: 215 VVEATEKEHEEDGNEENVT-VTKPVEV-ATDQVESKEVKKKEVSETTEPTAPPVTVAEVL 272
Query: 269 KVAESVQTV 295
++ + V V
Sbjct: 273 EIEDKVPKV 281
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 31.9 bits (69), Expect = 0.059
Identities = 17/57 (29%), Positives = 27/57 (47%)
Frame = +2
Query: 68 ESQAKPPLLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETS 238
E P +A+ S+ V P++ + +VP+ + PPVE K+ K K E S
Sbjct: 646 EIPRSPSRFKARSPSKAARVLKKPLKKRVRFSEVPTTSSVPPVEIKNKDSKPKVEKS 702
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.9 bits (64), Expect = 0.24
Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 1/65 (1%)
Frame = +2
Query: 149 IAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEPVAEIPKVAESVQTVPTLPIAPL-VC 325
++ P P D PP P+ K + T +AP+ V +PK++ VP LP A
Sbjct: 979 LSSPTSEPPKDH-PPSAPLSKPVS--TSPAAPLARVPPVPKLSSKAPPVP-LPSADAPPI 1034
Query: 326 PIKST 340
P+ ST
Sbjct: 1035 PVPST 1039
Score = 29.1 bits (62), Expect = 0.42
Identities = 24/97 (24%), Positives = 41/97 (42%), Gaps = 3/97 (3%)
Frame = +2
Query: 62 ITESQAKPPLLEAKEKSETTVVTSAPVEPIAKPIKVPS-ADTAPPVE-PIEKELKEKTET 235
++ ++PP + V+++P P+A+ VP + APPV P +
Sbjct: 979 LSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPS 1038
Query: 236 SAPIEPV-AEIPKVAESVQTVPTLPIAPLVCPIKSTP 343
+AP P+ P V +S P+ P P+ P P
Sbjct: 1039 TAPPVPIPTSTPPVPKSSSGAPSAP-PPVPAPSSEIP 1074
Score = 27.5 bits (58), Expect = 1.3
Identities = 16/64 (25%), Positives = 28/64 (43%)
Frame = +2
Query: 137 PVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEPVAEIPKVAESVQTVPTLPIAP 316
P P++ + P+++ P P L + TS P P+A +P V + P +P+
Sbjct: 971 PPLPVSNILSSPTSEP-PKDHPPSAPLSKPVSTS-PAAPLARVPPVPKLSSKAPPVPLPS 1028
Query: 317 LVCP 328
P
Sbjct: 1029 ADAP 1032
>SPCC63.14 |||conserved fungal protein|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1184
Score = 29.5 bits (63), Expect = 0.32
Identities = 14/37 (37%), Positives = 21/37 (56%)
Frame = +2
Query: 149 IAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEPVA 259
+A PI V + ++PP E ++ KE S+P PVA
Sbjct: 985 VAHPIPVSNGLSSPPRERLDDNAKEILSRSSPKSPVA 1021
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.5 bits (63), Expect = 0.32
Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Frame = +2
Query: 65 TESQAKPPLLEAKE--KSETTVVTSAPVEPIAKPIKVPSA----DTAPPVEPIEKELKEK 226
+ + A PP A +SE TSAP P P SA AP PI L
Sbjct: 118 SSASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAP---PIPSSLPPP 174
Query: 227 TETSAPIEPVAEIPKVAESVQTV-PTLPIAPL-VCPIKSTPEK 349
+ +AP++ P + +V + P +P PL P+ +T +
Sbjct: 175 AQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSR 217
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.9 bits (59), Expect = 0.96
Identities = 18/56 (32%), Positives = 24/56 (42%), Gaps = 1/56 (1%)
Frame = +2
Query: 59 AITESQAKPPLLEAKEKSETTVVTSAPVEPIAKPIKVPSA-DTAPPVEPIEKELKE 223
A T S +KP + + S P P+A + PSA PP P E E K+
Sbjct: 1054 ATTVSASKPAPSTVTSAASSPSNISKPSAPVANNVSKPSAVPPPPPPPPAEVEKKD 1109
Score = 26.2 bits (55), Expect = 2.9
Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 56 SAITESQAKPPLLEAKEKSETTVVT-SAPV-EPIAKPIKVPSADTAPPVEPIEKEL 217
+ ++ S+ P + + S + + SAPV ++KP VP PP E +K+L
Sbjct: 1055 TTVSASKPAPSTVTSAASSPSNISKPSAPVANNVSKPSAVPPPPPPPPAEVEKKDL 1110
>SPCC5E4.05c |||serine hydrolase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 378
Score = 27.9 bits (59), Expect = 0.96
Identities = 19/72 (26%), Positives = 28/72 (38%), Gaps = 1/72 (1%)
Frame = +2
Query: 89 LLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVE-PIEKELKEKTETSAPIEPVAEI 265
+ E + SET KP SA +A P P+E+E + T + P
Sbjct: 270 IYEHSKPSETVKSEQETAVEHPKPTATTSAPSASPTGVPVEEESHKATSDAVPPAEAKPE 329
Query: 266 PKVAESVQTVPT 301
P A + + PT
Sbjct: 330 PVPASAAERAPT 341
>SPCC1235.01 ||SPCC320.02c|sequence orphan|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 658
Score = 27.5 bits (58), Expect = 1.3
Identities = 22/88 (25%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Frame = +2
Query: 116 TTVVTSAPVEPIAKPIKVPSADTAPPVEPIEK------ELKEKTETSAPIE-------PV 256
TT+V P+E I + +P + P+E+ ++E T + P+E P+
Sbjct: 12 TTIVIITPMEEITT-MTIPMEEITTMTIPMEEITTMTIPMEEITTMTTPMEEITTITTPM 70
Query: 257 AEIPKVAESVQTVPTLPIAPLVCPIKST 340
E + V+T LP+A + P+ T
Sbjct: 71 EETTTITPMVETTTILPMAAMTTPMVET 98
>SPAC4A8.11c |fas2|lsd1|fatty acid synthase alpha subunit Lsd1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1842
Score = 27.1 bits (57), Expect = 1.7
Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 1/58 (1%)
Frame = +2
Query: 125 VTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEPVA-EIPKVAESVQTV 295
V P E A P +TA P +TSAP + E PK E + T+
Sbjct: 97 VADEPAEAPASTSSTPKVETAAAAAPAATPAPAPAQTSAPAAALPDEPPKALEVLHTL 154
>SPCC4B3.15 |mid1|dmf1|medial ring protein Mid1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 920
Score = 26.6 bits (56), Expect = 2.2
Identities = 13/51 (25%), Positives = 25/51 (49%)
Frame = +2
Query: 86 PLLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETS 238
P LE E + + + P+EP+A + P DT+ P + + + ++ S
Sbjct: 260 PALERVETTASLDMDYKPLEPLAPIQEAPVEDTSEPFSSVPEATLDDSDIS 310
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 2.9
Identities = 18/64 (28%), Positives = 22/64 (34%)
Frame = +2
Query: 80 KPPLLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEPVA 259
KP E T + E +A P+ VP+ AP EP K P A
Sbjct: 863 KPASAITPETKSTVNQIMSGGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEKAPSPPA 922
Query: 260 EIPK 271
PK
Sbjct: 923 TRPK 926
>SPBC16A3.19 |||histone acetyltransferase complex subunit Eaf7
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 272
Score = 26.2 bits (55), Expect = 2.9
Identities = 27/104 (25%), Positives = 44/104 (42%), Gaps = 14/104 (13%)
Frame = +2
Query: 68 ESQAKPPLLEAKEKSETTVVTSAPVEPIAKPIK--------VPSADTAPPVEPIEKELKE 223
E + K KEK E+ V + E I++ ++ V +P ++P+ E KE
Sbjct: 154 EPEVKQETNLQKEKKESKVKLESKEEKISRNLRSSSRSISPVTEQPQSPKIQPVIPEKKE 213
Query: 224 KT---ETSAPIEPVAEIP---KVAESVQTVPTLPIAPLVCPIKS 337
K+ E+S + + P A S + + T PI P P S
Sbjct: 214 KSEKKESSMTLRKRSVSPSSQNTARSPKRMATEPIEPASSPAAS 257
>SPAC26A3.10 |||Arf GAP protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 923
Score = 25.8 bits (54), Expect = 3.9
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +3
Query: 339 LQRSLRLQIPHRIALLLPILRPKKKFLMCRLPNA 440
+ RSL I +LLL L + K L+C++ NA
Sbjct: 757 IHRSLGTHISKTRSLLLDSLSQQSKVLLCKIGNA 790
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 25.8 bits (54), Expect = 3.9
Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Frame = +2
Query: 77 AKPPLLEAKEKSETTVVTSAPVE-PIAKPIKVPSADTAPPVEPIEKELKEKTETSAP 244
++PP+ + +S T TSAP+ P +P + P E + EL+ +++ P
Sbjct: 1088 SRPPIATSAGRSSTAASTSAPLTYPAGDRSHIP-GNLRPIYEMLNAELQRVSQSLPP 1143
>SPBC21D10.12 |hob1||BAR adaptor protein Hob1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 466
Score = 25.8 bits (54), Expect = 3.9
Identities = 12/40 (30%), Positives = 17/40 (42%)
Frame = +2
Query: 83 PPLLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVEP 202
PP++ + T +APV A + VP AP P
Sbjct: 368 PPVMPQPAAAAVTTPVAAPVAAAAAAVPVPPPAPAPAAAP 407
>SPCC126.15c |sec65||signal recognition particle subunit Sec65
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 199
Score = 25.0 bits (52), Expect = 6.8
Identities = 22/87 (25%), Positives = 37/87 (42%)
Frame = +2
Query: 89 LLEAKEKSETTVVTSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSAPIEPVAEIP 268
+L K+ VV + +P+K AD P +E L EK + I +A++
Sbjct: 28 ILNPLAKNIADVVRDLGYKCKLEPLKTHPADWVNPGR-VEMVLPEKIQKKYVINEIAKVL 86
Query: 269 KVAESVQTVPTLPIAPLVCPIKSTPEK 349
+ PT+ PL PI++ P +
Sbjct: 87 LLR------PTVKTDPLSLPIQNVPAR 107
>SPAC521.03 |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 259
Score = 25.0 bits (52), Expect = 6.8
Identities = 16/59 (27%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = +2
Query: 128 TSAPVEPIAKPIKVPSADTAPPVEPIEKELKEKTETSA-PIE-PVAEIPKVAESVQTVP 298
T+ + +AK + +A VE I KEL+ K E S P++ V+++ + ++++P
Sbjct: 22 TAFEIAKVAKVKLILAARRFSTVEEIAKELESKYEVSVLPLKLDVSDLKSIPGVIESLP 80
>SPBC19F5.02c |||U3 snoRNP protein Utp4 |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 710
Score = 25.0 bits (52), Expect = 6.8
Identities = 8/20 (40%), Positives = 13/20 (65%)
Frame = -3
Query: 64 YSTRNWNWSGDWSSFSNLGI 5
+ +R W WS +W SF +L +
Sbjct: 597 HPSRFWIWSANWVSFFDLNL 616
>SPAC15A10.16 |bud6|aip3, fat1, SPAC15E1.01|actin interacting
protein 3 homolog Bud6|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1385
Score = 25.0 bits (52), Expect = 6.8
Identities = 21/90 (23%), Positives = 36/90 (40%), Gaps = 6/90 (6%)
Frame = +2
Query: 92 LEAKEKSETTVVTSAPVEPIAKPIK-VPSADTAP--PVEPIEKELKEKTETSAPIEPVAE 262
+E + ++T T A + I P + +D P P P+E + + P
Sbjct: 659 VEEDSEDKSTPNTGASAKLINDPSSTITVSDVYPKKPASPVEITEPPSSALVSATSPTTN 718
Query: 263 IPKVAESVQ---TVPTLPIAPLVCPIKSTP 343
+P V E+V T P++ +V I P
Sbjct: 719 VPIVPEAVHLSTAFSTAPVSTIVSNISPLP 748
>SPBC21D10.10 |||bromodomain protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 299
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/39 (33%), Positives = 19/39 (48%)
Frame = +2
Query: 176 ADTAPPVEPIEKELKEKTETSAPIEPVAEIPKVAESVQT 292
A T PVE K L+ + +T P P+VA + +T
Sbjct: 134 AKTEAPVEAANKSLRSRKKTPEIAAPANIEPEVAPTTKT 172
>SPCC962.02c |bir1|cut17, pbh1, SPCP31B10.10c|survivin
homolog|Schizosaccharomyces pombe|chr 3|||Manual
Length = 997
Score = 25.0 bits (52), Expect = 6.8
Identities = 13/41 (31%), Positives = 20/41 (48%), Gaps = 1/41 (2%)
Frame = +2
Query: 134 APVEPIAKPIKVPSADT-APPVEPIEKELKEKTETSAPIEP 253
AP P+ +P + APP EPI+ ++ P+EP
Sbjct: 905 APQTPVKSKHALPLVEANAPPWEPIDFSSLLESPVPNPVEP 945
>SPBC1289.10c |||transcription factor |Schizosaccharomyces pombe|chr
2|||Manual
Length = 743
Score = 24.6 bits (51), Expect = 9.0
Identities = 11/29 (37%), Positives = 15/29 (51%)
Frame = +2
Query: 98 AKEKSETTVVTSAPVEPIAKPIKVPSADT 184
AK KS T T P E P+KV + ++
Sbjct: 500 AKTKSTTPKSTDTPTEATTSPVKVSTKNS 528
>SPCC584.04 |sup35|erf3|translation release factor eRF3
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 662
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)
Frame = +2
Query: 128 TSAPVEPIAKPIKVPSADTAPPV--EPIEKELKEKTETSAP 244
TSAP KPI + T P +P + KTET AP
Sbjct: 125 TSAPKS--TKPISISLGGTKAPTTTKPAAPAAQSKTETPAP 163
>SPAC22F3.06c |lon1||Lon protease homolog Lon1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1067
Score = 24.6 bits (51), Expect = 9.0
Identities = 16/44 (36%), Positives = 20/44 (45%)
Frame = +2
Query: 56 SAITESQAKPPLLEAKEKSETTVVTSAPVEPIAKPIKVPSADTA 187
+A T PPLL+ E E + SA IAK +P A A
Sbjct: 693 TANTIDTIPPPLLDRMEVIELSGYVSAEKVNIAKGYLIPQAKAA 736
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,836,164
Number of Sequences: 5004
Number of extensions: 34539
Number of successful extensions: 154
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 130
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 150
length of database: 2,362,478
effective HSP length: 68
effective length of database: 2,022,206
effective search space used: 210309424
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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