Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_N08
         (584 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   2.2  
AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.              23   2.2  
AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta...    23   2.2  
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           22   3.9  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    21   6.7  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 7/19 (36%), Positives = 13/19 (68%)
 Frame = +1

Query: 493 IVKSYAVFWVGIESAPVKV 549
           ++ S+  FW+  E+AP +V
Sbjct: 259 VIMSWVSFWIKPEAAPARV 277


>AY823258-1|AAX18443.1|  145|Apis mellifera pburs protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 177 LNISSVPWDHVEARARRCSGGVSAGKRHHRCN 82
           ++I+   +D +    R CSG +S  K    CN
Sbjct: 43  VHITKDEYDEIGRLKRTCSGDISVTKCEGFCN 74


>AM420632-1|CAM06632.1|  145|Apis mellifera bursicon subunit beta
           protein precursor protein.
          Length = 145

 Score = 23.0 bits (47), Expect = 2.2
 Identities = 10/32 (31%), Positives = 16/32 (50%)
 Frame = -3

Query: 177 LNISSVPWDHVEARARRCSGGVSAGKRHHRCN 82
           ++I+   +D +    R CSG +S  K    CN
Sbjct: 43  VHITKDEYDEIGRLKRTCSGDISVTKCEGFCN 74


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +2

Query: 233 IPLTWLSAAKHPKTKWP 283
           IP+T  +  KH KTK P
Sbjct: 210 IPVTLTTVPKHSKTKSP 226


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.4 bits (43), Expect = 6.7
 Identities = 7/14 (50%), Positives = 9/14 (64%)
 Frame = -3

Query: 210 SCSDGVRRWYCLNI 169
           SCSD + RW  L +
Sbjct: 434 SCSDKIARWNVLGV 447


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 170,712
Number of Sequences: 438
Number of extensions: 3555
Number of successful extensions: 6
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16993167
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)