Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_N06
(573 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_01_0223 - 1766292-1766442,1767621-1767676,1767798-1767891,176... 179 1e-45
06_03_1479 + 30428488-30428502,30428619-30428715,30429627-304299... 178 2e-45
02_01_0111 - 825369-825428,825778-826380,826467-827267,827716-82... 175 3e-44
04_04_1155 - 31308704-31309051,31309301-31309451,31309532-313097... 32 0.37
06_03_0970 + 26424209-26424910,26425053-26425109,26425251-264254... 31 0.49
04_04_1157 - 31333870-31334220,31334440-31334590,31334678-313349... 31 0.65
04_04_1158 - 31342934-31343272,31343508-31343658,31343745-313439... 31 0.86
07_03_0829 - 21792924-21793247,21793332-21793482,21793577-217938... 30 1.5
02_04_0094 + 19664434-19665078 30 1.5
12_01_0119 + 905916-907277,907737-907774,908269-908492,909411-90... 29 2.0
04_04_0499 + 25674024-25674233,25674515-25675072,25675320-256754... 29 2.0
10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595 29 2.6
03_02_0435 - 8406262-8406419,8406499-8406547,8406577-8407458,840... 29 3.5
11_06_0143 + 20589574-20589684,20590256-20590873,20590943-205910... 28 4.6
10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454 28 6.1
02_05_0640 - 30558523-30559027,30559123-30559252,30559388-305598... 28 6.1
11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-85... 27 8.0
10_01_0045 + 611166-612308 27 8.0
10_01_0043 + 570340-571683 27 8.0
>03_01_0223 -
1766292-1766442,1767621-1767676,1767798-1767891,
1768004-1768071,1768441-1769585,1770072-1770168,
1770265-1770279
Length = 541
Score = 179 bits (436), Expect = 1e-45
Identities = 82/139 (58%), Positives = 102/139 (73%)
Frame = +3
Query: 156 TTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRERIPERVVHAKGAGAFGYFEV 335
+T SGAPV TVG GP LL+D + ++++++FDRERIPERVVHA+GA A G+FEV
Sbjct: 18 STNSGAPVWNNNNSLTVGSRGPILLEDYHLVEKLANFDRERIPERVVHARGASAKGFFEV 77
Query: 336 THDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGNWDLVG 515
THDIT + A G +TP+ VRFSTV E GS +T+RDPRGFA+KFYT +GNWDLVG
Sbjct: 78 THDITHLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAIKFYTREGNWDLVG 137
Query: 516 NNTPIFFIRDPTLFPSFIH 572
NN P+FFIRD FP +H
Sbjct: 138 NNFPVFFIRDGMKFPDMVH 156
>06_03_1479 +
30428488-30428502,30428619-30428715,30429627-30429904,
30430256-30431032,30431254-30431343,30431538-30431605,
30431696-30431789,30431902-30431961
Length = 492
Score = 178 bits (434), Expect = 2e-45
Identities = 82/139 (58%), Positives = 103/139 (74%)
Frame = +3
Query: 156 TTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRERIPERVVHAKGAGAFGYFEV 335
TT SGAPV + TVG+ GP LL+D + +++++ FDRERIPERVVHA+GA A G+FEV
Sbjct: 18 TTNSGAPVWNNNSALTVGERGPILLEDYHLIEKLAQFDRERIPERVVHARGASAKGFFEV 77
Query: 336 THDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGNWDLVG 515
THDI+ + A G +TP+ VRFSTV E GS +T+RDPRGFAVKFYT +GN+DLVG
Sbjct: 78 THDISHLTCADFLRAPGVQTPVIVRFSTVVHERGSPETLRDPRGFAVKFYTREGNFDLVG 137
Query: 516 NNTPIFFIRDPTLFPSFIH 572
NN P+FFIRD FP +H
Sbjct: 138 NNMPVFFIRDGMKFPDMVH 156
>02_01_0111 -
825369-825428,825778-826380,826467-827267,827716-827766
Length = 504
Score = 175 bits (425), Expect = 3e-44
Identities = 80/139 (57%), Positives = 99/139 (71%)
Frame = +3
Query: 156 TTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRERIPERVVHAKGAGAFGYFEV 335
TT +GAPV TVG GP LL+D + +++++ F RERIPERVVHA+GA A G+FE
Sbjct: 30 TTNAGAPVWNDNEALTVGPRGPILLEDYHLIEKVAHFARERIPERVVHARGASAKGFFEC 89
Query: 336 THDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGNWDLVG 515
THD+T + A G +TP+ VRFSTV E GS +T+RDPRGFAVKFYT +GNWDL+G
Sbjct: 90 THDVTDITCADFLRSPGAQTPVIVRFSTVIHERGSPETIRDPRGFAVKFYTREGNWDLLG 149
Query: 516 NNTPIFFIRDPTLFPSFIH 572
NN P+FFIRD FP IH
Sbjct: 150 NNFPVFFIRDGIKFPDVIH 168
>04_04_1155 - 31308704-31309051,31309301-31309451,31309532-31309763,
31309854-31310064,31310304-31310422,31310507-31310581,
31310789-31310990,31311075-31311454,31311569-31311633,
31311735-31311779,31312166-31312231,31312667-31312741,
31313022-31313093,31313659-31313727,31313813-31313884,
31313995-31314066,31314441-31314512,31314597-31314668,
31315091-31315162,31315279-31315474,31316094-31316202
Length = 924
Score = 31.9 bits (69), Expect = 0.37
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +3
Query: 225 LLQDVNFLDEISSFDRERI-PERVVHA--KGAGAFGYFEVTHDITKYSAARVFEKIGKKT 395
+L D N +IS F ++ ++ H K AG FGY + + + EK+
Sbjct: 725 VLLDANLNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLAPEYAMRGHMT----EKVDVFA 780
Query: 396 PIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGNWDLVGNNTPIFFIRDPTL 554
V T+ G DT+ + K Y + W+L NN P+ + DP L
Sbjct: 781 FGVVLLETLAGRPNYDDTLEED-----KIYIFEWAWELYENNNPLGIV-DPNL 827
>06_03_0970 +
26424209-26424910,26425053-26425109,26425251-26425478,
26425788-26425881,26425955-26426161,26426581-26426711,
26426943-26426992,26427125-26427432,26427548-26427651,
26427810-26428526,26429159-26429338,26429703-26429831
Length = 968
Score = 31.5 bits (68), Expect = 0.49
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 1/65 (1%)
Frame = +3
Query: 195 IQTVGKNGPALLQDVNFLDEISSFDRERIPERVVHAKGAGAFGYFEVTHDITKYSAARVF 374
++ +GK+ AL +D NF + SS D R+ E KG YF + + + AR+
Sbjct: 32 MEKLGKDQDAL-EDANFQQKPSSVDLNRLMELANSEKGVSQMQYFVKHWEYKRANTARLL 90
Query: 375 -EKIG 386
E+IG
Sbjct: 91 KEQIG 95
>04_04_1157 - 31333870-31334220,31334440-31334590,31334678-31334909,
31335001-31335211,31335517-31335635,31335720-31335953,
31336000-31336201,31336297-31336676,31336792-31336856,
31337362-31337427,31337883-31337957,31338233-31338304,
31338994-31339062,31339150-31339221,31339325-31339396,
31339791-31339862,31339947-31340018,31340474-31340545,
31340645-31340828,31341474-31341588
Length = 961
Score = 31.1 bits (67), Expect = 0.65
Identities = 30/113 (26%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Frame = +3
Query: 225 LLQDVNFLDEISSFDRERI-PERVVHA--KGAGAFGYFEVTHDITKYSAARVFEKIGKKT 395
+L D N +IS F ++ ++ H K AG FGY + + + EK+
Sbjct: 761 VLIDANLNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLAPEYAMRGHMT----EKVDVFA 816
Query: 396 PIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGNWDLVGNNTPIFFIRDPTL 554
V T+ G DT+ + K Y + W+L NN P+ + DP L
Sbjct: 817 FGVVLLETLAGRPNYDDTLEED-----KIYIFEWAWELYENNNPLGLV-DPKL 863
>04_04_1158 - 31342934-31343272,31343508-31343658,31343745-31343976,
31344173-31344284,31344572-31344690,31344772-31344936,
31345049-31345247,31345351-31345733,31345838-31345902,
31346003-31346047,31346402-31346467,31346707-31346778,
31346907-31346981,31347086-31347157,31347255-31347326,
31347954-31348022,31348109-31348180,31348280-31348351,
31348756-31348827,31349295-31349366,31349528-31349711,
31350082-31350220
Length = 948
Score = 30.7 bits (66), Expect = 0.86
Identities = 30/113 (26%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Frame = +3
Query: 225 LLQDVNFLDEISSFDRERI-PERVVHA--KGAGAFGYFEVTHDITKYSAARVFEKIGKKT 395
+L D N +IS F ++ ++ H K AG FGY + + R+ EK+
Sbjct: 752 VLLDANLNPKISDFGLAKLYDDKKTHVSTKVAGTFGYLAPEYAMR----GRMTEKVDVFA 807
Query: 396 PIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGNWDLVGNNTPIFFIRDPTL 554
V + G D + + K Y + WDL NN P+ + DP L
Sbjct: 808 FGVVLLEILAGRPNYDDALEED-----KIYIFEWAWDLYENNNPLGLV-DPKL 854
>07_03_0829 -
21792924-21793247,21793332-21793482,21793577-21793811,
21793900-21794110,21794218-21794435,21794536-21794671,
21796732-21797517
Length = 686
Score = 29.9 bits (64), Expect = 1.5
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 247 RKLTSWRRAGPFLPTVCMAVLTPTGAPDFVVMYPGES 137
R LT+WR AG P + P GAP+ + Y G S
Sbjct: 184 RYLTTWRSAGDPSPGDYTFKIDPRGAPEGFIWYNGTS 220
>02_04_0094 + 19664434-19665078
Length = 214
Score = 29.9 bits (64), Expect = 1.5
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 167 WCSCWCQDSHTNCRQEWSCPPPR 235
WC+ W + CR+ WS PPPR
Sbjct: 193 WCAPWLVSAA--CRRCWSAPPPR 213
>12_01_0119 +
905916-907277,907737-907774,908269-908492,909411-909637,
909733-909980,910275-910557,910707-911135
Length = 936
Score = 29.5 bits (63), Expect = 2.0
Identities = 19/64 (29%), Positives = 29/64 (45%)
Frame = -2
Query: 395 CFFTNFFKHSSCRVFCYIMSYFKVSKSTSAFCMYNTLWYTFPVKR*NLIQKVDILEEGRT 216
CF ++F K +FC + KV +F + LW P K IQ +D E+ R
Sbjct: 665 CFGSSFTKGEE--IFCKLRQLQKVIAQQDSFVGLSALWKYLPTKSNQEIQMLD--EQVRL 720
Query: 215 ILAD 204
++ D
Sbjct: 721 LILD 724
>04_04_0499 +
25674024-25674233,25674515-25675072,25675320-25675415,
25675509-25675601,25675882-25676125,25676239-25676276,
25676377-25676478
Length = 446
Score = 29.5 bits (63), Expect = 2.0
Identities = 23/75 (30%), Positives = 32/75 (42%)
Frame = -3
Query: 376 SNTLAAEYFVIS*VTSKYPKAPAPFACTTRSGIRSLSNDEISSRKLTSWRRAGPFLPTVC 197
+N+L AE+ VIS TS P P T R + + +SS + PF P+
Sbjct: 35 TNSLLAEWVVISRDTSFSLADPTPLKPTVRLDWYFMLSAAVSSSAMIVATATIPFFPSFH 94
Query: 196 MAVLTPTGAPDFVVM 152
P G P VV+
Sbjct: 95 RPRFRPGGLPRRVVV 109
>10_08_0398 - 17588202-17589280,17590154-17590373,17593350-17593595
Length = 514
Score = 29.1 bits (62), Expect = 2.6
Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 3/69 (4%)
Frame = +3
Query: 96 PASDQLVNFKKSLKDSPGYITT-KSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 272
P VNF +SPG+ TT + + A+ + + GP+ LDE +
Sbjct: 31 PRFKAAVNFNGEQFESPGFFTTLRQAEHAAAEVALAALARRGPSYSLAARILDETGVYKN 90
Query: 273 --ERIPERV 293
+ + +RV
Sbjct: 91 LLQEVAQRV 99
>03_02_0435 -
8406262-8406419,8406499-8406547,8406577-8407458,
8408976-8409127,8410346-8410616
Length = 503
Score = 28.7 bits (61), Expect = 3.5
Identities = 14/36 (38%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Frame = -3
Query: 190 VLTPTGAPDFVVMYPGESFRDFLK--LTSWSEAGSL 89
+L+ GAP V+ + G++F FLK ++ WS+ SL
Sbjct: 432 ILSMEGAPIVVLYHCGDTFEAFLKANVSLWSQTSSL 467
>11_06_0143 +
20589574-20589684,20590256-20590873,20590943-20591010,
20591159-20591234,20591311-20591372,20591452-20591603,
20591889-20592052,20592129-20592317,20592417-20592538,
20592620-20592827,20593238-20593291,20593457-20593626,
20594265-20594355,20595405-20595529,20596372-20596444,
20596822-20596914,20597482-20597728,20598305-20598364,
20598461-20598590,20599008-20599014
Length = 939
Score = 28.3 bits (60), Expect = 4.6
Identities = 19/66 (28%), Positives = 28/66 (42%)
Frame = +3
Query: 330 EVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTVRDPRGFAVKFYTDDGNWDL 509
E D+ K RV I KKT + VGG + + V F T+DG +D+
Sbjct: 270 EEATDLIKRYGGRVTGSISKKTNYLLADEDVGGVKSN-----KAKELGVPFLTEDGLFDM 324
Query: 510 VGNNTP 527
+ + P
Sbjct: 325 IRKSKP 330
>10_01_0296 + 3069605-3070535,3071127-3071294,3075307-3076454
Length = 748
Score = 27.9 bits (59), Expect = 6.1
Identities = 14/38 (36%), Positives = 21/38 (55%)
Frame = +3
Query: 210 KNGPALLQDVNFLDEISSFDRERIPERVVHAKGAGAFG 323
KNG ++LQ V+ + S D ++I + H G G FG
Sbjct: 397 KNGGSILQKVDNIMIFSKDDLKKITKNNSHVIGQGGFG 434
>02_05_0640 - 30558523-30559027,30559123-30559252,30559388-30559868,
30560292-30560346,30560537-30560613,30561228-30561315,
30561490-30561593,30562050-30562231,30562347-30563109,
30563195-30563438,30564513-30564658,30565158-30565283,
30565404-30565517,30565595-30565762,30566283-30566528,
30566605-30566767,30566970-30567064,30567274-30567357,
30567769-30568055,30568359-30568572,30568923-30569140,
30569386-30569623,30570312-30571118,30571202-30571301,
30571694-30571737,30571824-30571973
Length = 1942
Score = 27.9 bits (59), Expect = 6.1
Identities = 13/48 (27%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Frame = -3
Query: 241 LTSWRRAGPFLPTVCMAVLTPTGAPDFVVMYPGESF---RDFLKLTSW 107
+ +W++A + C +L+P+ P +V+ Y SF R +L +W
Sbjct: 877 IQAWQQAETTVINQCNQLLSPSAEPTYVMTYLSHSFPQHRQYLCAGAW 924
>11_01_0110 + 850780-850805,851465-851537,851558-851720,851947-852260,
852330-852409,852506-852848,853068-853166,853240-853360,
853567-853723,853976-854099,855275-855368,855866-857259,
857882-857924,858240-858458,859379-859605,859701-859948,
860246-860552,860725-861153
Length = 1486
Score = 27.5 bits (58), Expect = 8.0
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -2
Query: 395 CFFTNFFKHSSCRVFCYIMSYFKVSKSTSAFCMYNTLWYTFPVKR*NLIQKVDILEEGRT 216
CF ++F K +FC + K +F + LW P K IQ +D E+ R
Sbjct: 1207 CFGSSFTKGEE--IFCKLRQLQKAIARQDSFVGLSALWKYLPTKSSQEIQMLD--EQVRL 1262
Query: 215 ILAD 204
++ D
Sbjct: 1263 LILD 1266
>10_01_0045 + 611166-612308
Length = 380
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 150 YITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRERIPERVVHAKGA 311
Y+ K G T V K+G D+N + +I +ERIPE++ G+
Sbjct: 231 YLGAKDGYYGNCSTMHVAVAKSGAVANADINDIVDIIRRAKERIPEQLKMTGGS 284
>10_01_0043 + 570340-571683
Length = 447
Score = 27.5 bits (58), Expect = 8.0
Identities = 16/54 (29%), Positives = 25/54 (46%)
Frame = +3
Query: 150 YITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRERIPERVVHAKGA 311
Y+ K G T V K+G D+N + +I +ERIPE++ G+
Sbjct: 293 YLGAKDGYYGNCSTMHVAVAKSGAVANADINDIVDIIRRAKERIPEQLKMTGGS 346
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,828,727
Number of Sequences: 37544
Number of extensions: 340955
Number of successful extensions: 941
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 915
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 941
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1328870592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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