Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_N06
(573 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1 prot... 246 1e-65
X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein. 246 1e-65
AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical... 246 1e-65
U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catal... 241 2e-64
Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2 prot... 241 3e-64
AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical ... 241 3e-64
AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical... 233 7e-62
Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical pr... 33 0.14
AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical... 33 0.14
Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical pr... 30 1.3
Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical pr... 29 2.3
U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical pr... 29 3.1
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family... 28 5.4
U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family... 28 5.4
AL132863-9|CAN99716.1| 143|Caenorhabditis elegans Hypothetical ... 28 5.4
AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical ... 28 5.4
>Y14065-2|CAA74393.1| 497|Caenorhabditis elegans catalase 1
protein.
Length = 497
Score = 246 bits (601), Expect = 1e-65
Identities = 109/160 (68%), Positives = 133/160 (83%)
Frame = +3
Query: 93 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 272
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 273 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 452
ERIPERVVHAKGAGA GYFEVTHDI+KY A +F K+GK+TP+ +RFSTVGGESGSADT
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTA 122
Query: 453 RDPRGFAVKFYTDDGNWDLVGNNTPIFFIRDPTLFPSFIH 572
RDPRGFA+KFYT++GNWDLVGNNTPIFFIRDP FP+FIH
Sbjct: 123 RDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIH 162
>X82175-1|CAA57665.1| 500|Caenorhabditis elegans catalase protein.
Length = 500
Score = 246 bits (601), Expect = 1e-65
Identities = 109/160 (68%), Positives = 133/160 (83%)
Frame = +3
Query: 93 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 272
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 273 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 452
ERIPERVVHAKGAGA GYFEVTHDI+KY A +F K+GK+TP+ +RFSTVGGESGSADT
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTA 122
Query: 453 RDPRGFAVKFYTDDGNWDLVGNNTPIFFIRDPTLFPSFIH 572
RDPRGFA+KFYT++GNWDLVGNNTPIFFIRDP FP+FIH
Sbjct: 123 RDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIH 162
>AL034488-15|CAA22451.1| 500|Caenorhabditis elegans Hypothetical
protein Y54G11A.5 protein.
Length = 500
Score = 246 bits (601), Expect = 1e-65
Identities = 109/160 (68%), Positives = 133/160 (83%)
Frame = +3
Query: 93 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 272
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 273 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 452
ERIPERVVHAKGAGA GYFEVTHDI+KY A +F K+GK+TP+ +RFSTVGGESGSADT
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDISKYCKADIFNKVGKQTPLLIRFSTVGGESGSADTA 122
Query: 453 RDPRGFAVKFYTDDGNWDLVGNNTPIFFIRDPTLFPSFIH 572
RDPRGFA+KFYT++GNWDLVGNNTPIFFIRDP FP+FIH
Sbjct: 123 RDPRGFAIKFYTEEGNWDLVGNNTPIFFIRDPIHFPNFIH 162
>U55384-1|AAC14537.1| 496|Caenorhabditis elegans cytosolic catalase
protein.
Length = 496
Score = 241 bits (590), Expect = 2e-64
Identities = 109/160 (68%), Positives = 132/160 (82%)
Frame = +3
Query: 93 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 272
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 273 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 452
ERIPERVVHAKGAGA GYFEVTHDITKY A +F K+GK+TP+ VRFSTV GESGSADTV
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDITKYGKADMFHKVGKQTPLLVRFSTVAGESGSADTV 122
Query: 453 RDPRGFAVKFYTDDGNWDLVGNNTPIFFIRDPTLFPSFIH 572
RDPRGF++KFYT++GNWDLVGNNTPIFFIRD FP+FIH
Sbjct: 123 RDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIH 162
>Y14066-1|CAA74394.1| 497|Caenorhabditis elegans catalase 2
protein.
Length = 497
Score = 241 bits (589), Expect = 3e-64
Identities = 109/160 (68%), Positives = 132/160 (82%)
Frame = +3
Query: 93 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 272
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 273 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 452
ERIPERVVHAKGAGA GYFEVTHDITKY A +F K+GK+TP+ VRFSTV GESGSADTV
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTV 122
Query: 453 RDPRGFAVKFYTDDGNWDLVGNNTPIFFIRDPTLFPSFIH 572
RDPRGF++KFYT++GNWDLVGNNTPIFFIRD FP+FIH
Sbjct: 123 RDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIH 162
>AL034488-5|CAA22458.2| 497|Caenorhabditis elegans Hypothetical
protein Y54G11A.6 protein.
Length = 497
Score = 241 bits (589), Expect = 3e-64
Identities = 109/160 (68%), Positives = 132/160 (82%)
Frame = +3
Query: 93 DPASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 272
DP+ +QL +K++ P ITT +GAP+ KTA+ T G+ GP L+QDV ++DE++ FDR
Sbjct: 4 DPSDNQLKTYKETYP-KPQVITTSNGAPIYSKTAVLTAGRRGPMLMQDVVYMDEMAHFDR 62
Query: 273 ERIPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTV 452
ERIPERVVHAKGAGA GYFEVTHDITKY A +F K+GK+TP+ VRFSTV GESGSADTV
Sbjct: 63 ERIPERVVHAKGAGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTV 122
Query: 453 RDPRGFAVKFYTDDGNWDLVGNNTPIFFIRDPTLFPSFIH 572
RDPRGF++KFYT++GNWDLVGNNTPIFFIRD FP+FIH
Sbjct: 123 RDPRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIH 162
>AL034488-11|CAD31698.1| 512|Caenorhabditis elegans Hypothetical
protein Y54G11A.13 protein.
Length = 512
Score = 233 bits (570), Expect = 7e-62
Identities = 105/158 (66%), Positives = 129/158 (81%)
Frame = +3
Query: 99 ASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRER 278
A DQL ++ ++ P +TT +GAP+ KTA+ T G+ GP L+QD+ ++DE++ FDRER
Sbjct: 21 AEDQLKAYRDRNQE-PHLLTTSNGAPIYSKTAVLTAGRRGPMLMQDIVYMDEMAHFDRER 79
Query: 279 IPERVVHAKGAGAFGYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGGESGSADTVRD 458
IPERVVHAKG GA GYFEVTHDITKY A +F K+GK+TP+ VRFSTV GESGSADTVRD
Sbjct: 80 IPERVVHAKGGGAHGYFEVTHDITKYCKADMFNKVGKQTPLLVRFSTVAGESGSADTVRD 139
Query: 459 PRGFAVKFYTDDGNWDLVGNNTPIFFIRDPTLFPSFIH 572
PRGF++KFYT++GNWDLVGNNTPIFFIRD FP+FIH
Sbjct: 140 PRGFSLKFYTEEGNWDLVGNNTPIFFIRDAIHFPNFIH 177
>Z82069-7|CAB04907.2| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 96 PASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 272
P + Q VN+ LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>AL132902-15|CAC14425.1| 1792|Caenorhabditis elegans Hypothetical
protein W04A8.7 protein.
Length = 1792
Score = 33.1 bits (72), Expect = 0.14
Identities = 16/59 (27%), Positives = 27/59 (45%)
Frame = +3
Query: 96 PASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDR 272
P + Q VN+ LK SP ++ +SG P+ +T + FLD++ D+
Sbjct: 229 PMTSQAVNYGFKLKKSPQKVSIRSGKPLNYRTPDDLPSTSSGPAPNSAPFLDKVEVIDK 287
>Z78416-2|CAB01677.2| 583|Caenorhabditis elegans Hypothetical
protein C23H4.2 protein.
Length = 583
Score = 29.9 bits (64), Expect = 1.3
Identities = 21/75 (28%), Positives = 39/75 (52%), Gaps = 6/75 (8%)
Frame = +3
Query: 102 SDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQ-----DVNF-LDEISS 263
S L NF K K SPG+ G ++ + + ++GP +L+ DV+F + E++
Sbjct: 420 SKLLTNFTKHGKPSPGWDPVDPGRMNYLELKVDSKARSGPVMLEGYHAKDVSFWVGEMTE 479
Query: 264 FDRERIPERVVHAKG 308
FD+ ++ H++G
Sbjct: 480 FDQN--VSKMRHSEG 492
>Z66512-5|CAA91327.2| 1245|Caenorhabditis elegans Hypothetical
protein F52H3.7a protein.
Length = 1245
Score = 29.1 bits (62), Expect = 2.3
Identities = 20/66 (30%), Positives = 31/66 (46%)
Frame = +3
Query: 99 ASDQLVNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRER 278
++ L+ F K+ +D P T S A +AIQ +N A + DV F D + E
Sbjct: 14 SAKNLIPFAKNTEDKPVDADTASDAKDAKDSAIQEAVQNASAAINDV-FTDAVDKL--EE 70
Query: 279 IPERVV 296
+ + VV
Sbjct: 71 VKDTVV 76
>U64856-5|AAT81185.1| 301|Caenorhabditis elegans Hypothetical
protein T25F10.6b protein.
Length = 301
Score = 28.7 bits (61), Expect = 3.1
Identities = 25/81 (30%), Positives = 40/81 (49%)
Frame = +3
Query: 114 VNFKKSLKDSPGYITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRERIPERV 293
++ K+ L S G I ++G+ K A Q G G + +DV +D++ S + I +
Sbjct: 90 IHTKEKLMRSEGIIPIQAGSN---KYASQK-GMTGFGVPRDV--IDKVKSDNLAEITDEK 143
Query: 294 VHAKGAGAFGYFEVTHDITKY 356
A AG G+ H+ITKY
Sbjct: 144 KIANQAGMTGFGMPRHNITKY 164
>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
protein 5, isoformb protein.
Length = 1306
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +3
Query: 153 ITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRERIPERVVHAKGAGAFGYFE 332
+ T+ PV + I + N P Q + + +S D + + V +GAFG +
Sbjct: 83 VPTRRSEPVTITIHILDINDNSPQFEQPIYMANTTASGDERDVVKVVATDVDSGAFG--Q 140
Query: 333 VTHDITK 353
VT+ I +
Sbjct: 141 VTYTIAQ 147
>U52002-2|AAB37728.1| 1544|Caenorhabditis elegans Cadherin family
protein 5, isoforma protein.
Length = 1544
Score = 27.9 bits (59), Expect = 5.4
Identities = 17/67 (25%), Positives = 30/67 (44%)
Frame = +3
Query: 153 ITTKSGAPVGVKTAIQTVGKNGPALLQDVNFLDEISSFDRERIPERVVHAKGAGAFGYFE 332
+ T+ PV + I + N P Q + + +S D + + V +GAFG +
Sbjct: 83 VPTRRSEPVTITIHILDINDNSPQFEQPIYMANTTASGDERDVVKVVATDVDSGAFG--Q 140
Query: 333 VTHDITK 353
VT+ I +
Sbjct: 141 VTYTIAQ 147
>AL132863-9|CAN99716.1| 143|Caenorhabditis elegans Hypothetical
protein Y37H2A.13 protein.
Length = 143
Score = 27.9 bits (59), Expect = 5.4
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +3
Query: 321 GYFEVTHDITKYSAARVFEKIGKKTPIAVRFSTVGG 428
G THD K R+++KIG + +A F +GG
Sbjct: 30 GVLNCTHDAYKVQLMRIYDKIGVE-EVASNFEYLGG 64
>AC024772-3|AAF60538.1| 2344|Caenorhabditis elegans Hypothetical
protein Y40C5A.3 protein.
Length = 2344
Score = 27.9 bits (59), Expect = 5.4
Identities = 11/21 (52%), Positives = 16/21 (76%)
Frame = +3
Query: 258 SSFDRERIPERVVHAKGAGAF 320
SSFD+E++P+ VV K AG +
Sbjct: 1951 SSFDKEQVPQVVVPTKPAGGY 1971
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,480,447
Number of Sequences: 27780
Number of extensions: 296961
Number of successful extensions: 963
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 918
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 963
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1184216096
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -