Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_N06
         (573 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.              24   0.93 
DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholi...    22   3.8  
AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    22   3.8  
AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.          22   3.8  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   6.6  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   6.6  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   6.6  
AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    21   8.7  

>U66709-1|AAB07515.1|  182|Apis mellifera ankyrin protein.
          Length = 182

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = +3

Query: 486 TDDGNWDLVGNNTPIFFIRDPTLFPSFI 569
           T +  W+ V  +TP+ F+ D   F + +
Sbjct: 87  TSESQWEDVTGSTPLTFVNDTVSFTTTV 114


>DQ026037-1|AAY87896.1|  431|Apis mellifera nicotinic acetylcholine
           receptor alpha9subunit protein.
          Length = 431

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = +3

Query: 456 DPRGFAVKFYTDDGNWD 506
           D +GF +  YT++  WD
Sbjct: 202 DKKGFHMDGYTNNSKWD 218


>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 6/30 (20%), Positives = 17/30 (56%)
 Frame = -3

Query: 271 LSNDEISSRKLTSWRRAGPFLPTVCMAVLT 182
           L ++E++++    W+ A   +  +C+ + T
Sbjct: 506 LKSEELNAKVTNDWKFAAMVIDRMCLIIFT 535


>AF084556-1|AAC71015.1|  652|Apis mellifera pipsqueak protein.
          Length = 652

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -2

Query: 83  HFDSGDCSLNKSCMKSRSR*HGATLWT 3
           H DSG+ +      +S S  HG+  WT
Sbjct: 386 HSDSGENNSRGHSGQSSSHHHGSKSWT 412


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 134 KGLSGIHYNKVWCSC 178
           K + GIH  K+W +C
Sbjct: 101 KWIFGIHLCKLWLTC 115


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 134 KGLSGIHYNKVWCSC 178
           K + GIH  K+W +C
Sbjct: 101 KWIFGIHLCKLWLTC 115


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +2

Query: 134 KGLSGIHYNKVWCSC 178
           K + GIH  K+W +C
Sbjct: 101 KWIFGIHLCKLWLTC 115


>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cyclase
           alpha 1 subunit protein.
          Length = 699

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 13/35 (37%), Positives = 19/35 (54%), Gaps = 3/35 (8%)
 Frame = +3

Query: 462 RGFAVKFYTDDGNWDLVGN--NTPIFFIR-DPTLF 557
           +G A +FY DD N  ++ +  NT  F  R  P L+
Sbjct: 222 KGIARQFYNDDANVYILPDPYNTKFFRYRITPELY 256


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 162,145
Number of Sequences: 438
Number of extensions: 3794
Number of successful extensions: 9
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16504155
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)