Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_N05
         (513 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC041178-1|AAH41178.1|  560|Homo sapiens EBF1 protein protein.         31   2.4  
BC038805-1|AAH38805.1|  591|Homo sapiens early B-cell factor 1 p...    31   2.4  
AF208502-1|AAF19643.1|  586|Homo sapiens early B-cell transcript...    30   4.1  
BC051867-1|AAH51867.1|  674|Homo sapiens fidgetin-like 1 protein.      29   7.2  
BC027856-1|AAH27856.1|  674|Homo sapiens FIGNL1 protein protein.       29   7.2  
AK023142-1|BAB14426.1|  674|Homo sapiens protein ( Homo sapiens ...    29   7.2  
AC018705-1|AAS01996.1|  674|Homo sapiens unknown protein.              29   7.2  

>BC041178-1|AAH41178.1|  560|Homo sapiens EBF1 protein protein.
          Length = 560

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -1

Query: 273 RLQYIYSNGTRTRSPFTHRLI*NKLTKQ 190
           RLQ +YSNG RT   F  RLI + +TKQ
Sbjct: 111 RLQLLYSNGIRTEQDFYVRLI-DSMTKQ 137


>BC038805-1|AAH38805.1|  591|Homo sapiens early B-cell factor 1
           protein.
          Length = 591

 Score = 31.1 bits (67), Expect = 2.4
 Identities = 16/28 (57%), Positives = 19/28 (67%)
 Frame = -1

Query: 273 RLQYIYSNGTRTRSPFTHRLI*NKLTKQ 190
           RLQ +YSNG RT   F  RLI + +TKQ
Sbjct: 111 RLQLLYSNGIRTEQDFYVRLI-DSMTKQ 137


>AF208502-1|AAF19643.1|  586|Homo sapiens early B-cell transcription
           factor protein.
          Length = 586

 Score = 30.3 bits (65), Expect = 4.1
 Identities = 15/28 (53%), Positives = 19/28 (67%)
 Frame = -1

Query: 273 RLQYIYSNGTRTRSPFTHRLI*NKLTKQ 190
           R+Q +YSNG RT   F  RLI + +TKQ
Sbjct: 106 RIQLLYSNGIRTEQDFYVRLI-DSMTKQ 132


>BC051867-1|AAH51867.1|  674|Homo sapiens fidgetin-like 1 protein.
          Length = 674

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 283 TRHSFAVHLQQWNKNTFAIYSSI 215
           T  S +VHL +W KN FAI S I
Sbjct: 3   TSSSRSVHLSEWQKNYFAITSGI 25


>BC027856-1|AAH27856.1|  674|Homo sapiens FIGNL1 protein protein.
          Length = 674

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 283 TRHSFAVHLQQWNKNTFAIYSSI 215
           T  S +VHL +W KN FAI S I
Sbjct: 3   TSSSRSVHLSEWQKNYFAITSGI 25


>AK023142-1|BAB14426.1|  674|Homo sapiens protein ( Homo sapiens
           cDNA FLJ13080 fis, clone NT2RP3002007, weakly similar to
           SAP1 PROTEIN. ).
          Length = 674

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 283 TRHSFAVHLQQWNKNTFAIYSSI 215
           T  S +VHL +W KN FAI S I
Sbjct: 3   TSSSRSVHLSEWQKNYFAITSGI 25


>AC018705-1|AAS01996.1|  674|Homo sapiens unknown protein.
          Length = 674

 Score = 29.5 bits (63), Expect = 7.2
 Identities = 13/23 (56%), Positives = 15/23 (65%)
 Frame = -3

Query: 283 TRHSFAVHLQQWNKNTFAIYSSI 215
           T  S +VHL +W KN FAI S I
Sbjct: 3   TSSSRSVHLSEWQKNYFAITSGI 25


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 57,122,911
Number of Sequences: 237096
Number of extensions: 1036771
Number of successful extensions: 1291
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1282
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1291
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4820001670
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)