Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_N04
         (564 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    62   3e-12
EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.     22   4.9  
D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.    22   4.9  
AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase pro...    22   4.9  
AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice...    21   6.5  
AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     21   6.5  
AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor ...    21   8.6  

>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 62.5 bits (145), Expect = 3e-12
 Identities = 55/184 (29%), Positives = 88/184 (47%), Gaps = 4/184 (2%)
 Frame = +2

Query: 8   THPVVTIAIEKTIPHPDYDPYHVQ--RRHDIALIRLKITAPYTDFVRPICLPSMDYTQQP 181
           T+  V  +I K I HP YD       + +DIAL++ +    + D V P CLP   +    
Sbjct: 228 TNATVLHSINKVIIHPKYDIIEKDDWQINDIALLKTEKDIKFGDKVGPACLPFQHFLDSF 287

Query: 182 SSNLRFFVAGWGRYKQFENGTNLSSKVKQHVKVPYFGRENCQAAQRTLREGAKVVINNGQ 361
           + +    V GWG +  F NG  + S + Q   +    +  C       +    +++N   
Sbjct: 288 AGS-DVTVLGWG-HTSF-NG--MLSHILQKTTLNMLTQVECY------KYYGNIMVN--A 334

Query: 362 LCAGGEAGKDSCKGDSGGPLMYEVGNT--FEAIGVVSFGTDKCGSVNIPGVYTNIYEYIP 535
           +CA  + GKD+C+ DSGGP++++   T     IG++S+G + CG    P   T +  YI 
Sbjct: 335 MCAYAK-GKDACQMDSGGPVLWQNPRTKRLVNIGIISWGAE-CG--KYPNGNTKVGSYID 390

Query: 536 WIRS 547
           WI S
Sbjct: 391 WIVS 394


>EF117814-1|ABO38437.1|  570|Apis mellifera cryptochrome 2 protein.
          Length = 570

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 7/15 (46%), Positives = 12/15 (80%)
 Frame = -2

Query: 512 YIRRGCLLSRIYPFQ 468
           Y+R GCL +R++ +Q
Sbjct: 272 YLRFGCLSTRLFYYQ 286


>D79208-1|BAA11466.1|  567|Apis mellifera alpha-glucosidase protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 56  DYDPYHVQRRHDIALIRLKITAPYTDF 136
           D+ P H   +H+   + LK   PY ++
Sbjct: 119 DFVPNHTSDQHEWFQLSLKNIEPYNNY 145


>AB253417-1|BAE86928.1|  567|Apis mellifera alpha-glucosidase
           protein.
          Length = 567

 Score = 21.8 bits (44), Expect = 4.9
 Identities = 8/27 (29%), Positives = 14/27 (51%)
 Frame = +2

Query: 56  DYDPYHVQRRHDIALIRLKITAPYTDF 136
           D+ P H   +H+   + LK   PY ++
Sbjct: 119 DFVPNHTSDQHEWFQLSLKNIEPYNNY 145


>AY268031-1|AAP23056.1|  810|Apis mellifera dorsal protein splice
           variant B protein.
          Length = 810

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = -2

Query: 344 QPLHLHAMSSALLDSSLYQSMEL*RVVSLY 255
           QP+H+H  ++    +  Y+  ++ + V +Y
Sbjct: 274 QPVHVHKQTAIAFRTPTYRMQQVEQPVQVY 303


>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 21.4 bits (43), Expect = 6.5
 Identities = 7/30 (23%), Positives = 17/30 (56%)
 Frame = -2

Query: 344 QPLHLHAMSSALLDSSLYQSMEL*RVVSLY 255
           QP+H+H  ++    +  Y+  ++ + V +Y
Sbjct: 274 QPVHVHKQTAIAFRTPTYRMQQVEQPVQVY 303


>AB267886-1|BAF46356.1|  567|Apis mellifera ecdysteroid receptor A
           isoform protein.
          Length = 567

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 11/44 (25%), Positives = 20/44 (45%)
 Frame = -3

Query: 409 GVTFARVLASFTSRAQLPVIYNNLCTFTQCPLRCLTVLSTKVWN 278
           G  FAR+L+  T    L    + +C   +   + L V   ++W+
Sbjct: 521 GTVFARLLSVLTELRTLGNQNSEMCFSLKFKNKKLPVFLAEIWD 564


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,815
Number of Sequences: 438
Number of extensions: 3632
Number of successful extensions: 10
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 16317903
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)