Samia BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_N02
         (363 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.            24   2.0  
AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic acetylch...    22   6.2  
AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic acetylch...    22   6.2  
AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic acetylch...    22   8.1  

>AY753542-1|AAV28545.1| 3361|Anopheles gambiae SGS5 protein.
          Length = 3361

 Score = 23.8 bits (49), Expect = 2.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 190 KYHDYSGFDEKRKKIVI 140
           KYHD+SG+   R   +I
Sbjct: 107 KYHDHSGYGSSRNTFLI 123


>AY705402-1|AAU12511.1|  509|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 7 protein.
          Length = 509

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 192 LKALTLPRDVCE*FNLFITVLLSTMV 269
           L   TLP D  E  +L +T+LLS  V
Sbjct: 233 LLGFTLPPDSGEKLSLGVTILLSLTV 258


>AY705399-1|AAU12508.1|  533|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 5 protein.
          Length = 533

 Score = 22.2 bits (45), Expect = 6.2
 Identities = 12/26 (46%), Positives = 15/26 (57%)
 Frame = +3

Query: 192 LKALTLPRDVCE*FNLFITVLLSTMV 269
           L   TLP D  E  +L +T+LLS  V
Sbjct: 265 LLGFTLPPDSGEKLSLGVTILLSLTV 290


>AY705400-1|AAU12509.1|  490|Anopheles gambiae nicotinic
           acetylcholine receptor subunitalpha 6 protein.
          Length = 490

 Score = 21.8 bits (44), Expect = 8.1
 Identities = 12/26 (46%), Positives = 14/26 (53%)
 Frame = +3

Query: 192 LKALTLPRDVCE*FNLFITVLLSTMV 269
           L   TLP D  E   L +T+LLS  V
Sbjct: 250 LLGFTLPPDSGEKLTLGVTILLSLTV 275


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 348,669
Number of Sequences: 2352
Number of extensions: 5067
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 57
effective length of database: 429,915
effective search space used: 27084645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)