Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_M23
         (504 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC050727-1|AAH50727.1|  280|Homo sapiens chromosome 20 open read...    31   1.7  
AL121740-1|CAB57330.1|  280|Homo sapiens hypothetical protein pr...    31   1.7  
AL031652-5|CAC18101.1|  280|Homo sapiens chromosome 20 open read...    31   1.7  
AB209590-1|BAD92827.1|  803|Homo sapiens bone morphogenetic prot...    30   5.3  
AY941929-1|AAY33278.1|  122|Homo sapiens anti-rabies virus immun...    29   7.0  

>BC050727-1|AAH50727.1|  280|Homo sapiens chromosome 20 open reading
           frame 103 protein.
          Length = 280

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +2

Query: 17  TPLSTSYRCSAPTRLNMTADSASTVAALILSRLQEEAFRDVPGKVFSAAREC 172
           TP   SY C A   +++ +        +ILS +  + F  +   VFS   +C
Sbjct: 174 TPAGKSYECQAQQTISLASSDPQKTVTMILSAVHIQPFDIISDFVFSEEHKC 225


>AL121740-1|CAB57330.1|  280|Homo sapiens hypothetical protein
           protein.
          Length = 280

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +2

Query: 17  TPLSTSYRCSAPTRLNMTADSASTVAALILSRLQEEAFRDVPGKVFSAAREC 172
           TP   SY C A   +++ +        +ILS +  + F  +   VFS   +C
Sbjct: 174 TPAGKSYECQAQQTISLASSDPQKTVTMILSAVHIQPFDIISDFVFSEEHKC 225


>AL031652-5|CAC18101.1|  280|Homo sapiens chromosome 20 open reading
           frame 103 protein.
          Length = 280

 Score = 31.5 bits (68), Expect = 1.7
 Identities = 14/52 (26%), Positives = 23/52 (44%)
 Frame = +2

Query: 17  TPLSTSYRCSAPTRLNMTADSASTVAALILSRLQEEAFRDVPGKVFSAAREC 172
           TP   SY C A   +++ +        +ILS +  + F  +   VFS   +C
Sbjct: 174 TPAGKSYECQAQQTISLASSDPQKTVTMILSAVHIQPFDIISDFVFSEEHKC 225


>AB209590-1|BAD92827.1|  803|Homo sapiens bone morphogenetic protein
           1 isoform 1, precursor variant protein.
          Length = 803

 Score = 29.9 bits (64), Expect = 5.3
 Identities = 19/35 (54%), Positives = 19/35 (54%)
 Frame = -3

Query: 106 EDERRDGAGRVCGHVQPGRGRAPVRGRERGLPLGA 2
           EDER   AGR  G  Q G  RA  RGR RG   GA
Sbjct: 10  EDER-GAAGRAGGGRQEGGRRAEGRGRGRGARAGA 43


>AY941929-1|AAY33278.1|  122|Homo sapiens anti-rabies virus
           immunoglobulin heavy chain variable region protein.
          Length = 122

 Score = 29.5 bits (63), Expect = 7.0
 Identities = 21/67 (31%), Positives = 33/67 (49%), Gaps = 2/67 (2%)
 Frame = +2

Query: 11  WQTPLS--TSYRCSAPTRLNMTADSASTVAALILSRLQEEAFRDVPGKVFSAARECGGSD 184
           W  P S  T+Y      R+ MT D++ + A + LSRL+ +        V+  ARE GG+ 
Sbjct: 50  WINPNSGGTNYAQKFQGRVTMTRDTSISTAYMELSRLRSD-----DTAVYYCAREWGGAA 104

Query: 185 VPDAVPI 205
             D + +
Sbjct: 105 ASDGMDV 111


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 59,007,628
Number of Sequences: 237096
Number of extensions: 1042449
Number of successful extensions: 3313
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3207
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3283
length of database: 76,859,062
effective HSP length: 85
effective length of database: 56,705,902
effective search space used: 4649883964
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)