Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_M23
         (504 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical pr...    29   1.4  
U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase prot...    29   1.4  

>Z68011-3|CAA92014.2|  821|Caenorhabditis elegans Hypothetical
           protein T21B6.3 protein.
          Length = 821

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 12/28 (42%), Positives = 15/28 (53%)
 Frame = -3

Query: 346 H*LAKNHDTRDAACLHGEVAARRGAPAR 263
           H  +  H+ R  AC +G    RRG PAR
Sbjct: 169 HCSSNGHEVRSQACEYGRKIQRRGCPAR 196


>U97407-6|AAB52481.1|  751|Caenorhabditis elegans Tyrosinase protein
           4 protein.
          Length = 751

 Score = 29.5 bits (63), Expect = 1.4
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 1/68 (1%)
 Frame = -1

Query: 201 GTASGTSLP-PHSRAALKTFPGTSRKASSWRRERMSAATVLAESAVMFSRVGAEHRYEVE 25
           GTASG     P+ R   K+     R  +   R R+ AA    ++   + R+G  H     
Sbjct: 90  GTASGNGCTLPNGRPLQKSVRKEYRTLTDDERNRLHAAFRALKNNGEYERIGRIHSQMSA 149

Query: 24  SGVCHSAP 1
           +G  HS P
Sbjct: 150 AGGAHSGP 157


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,304,273
Number of Sequences: 27780
Number of extensions: 159086
Number of successful extensions: 410
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 399
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 410
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 967231538
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)