Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_M23
         (504 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein RJP...    21   7.3  
DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex det...    21   7.3  
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    21   7.3  
DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex det...    21   9.6  
DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex det...    21   9.6  
DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex det...    21   9.6  
DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex det...    21   9.6  
DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex det...    21   9.6  
AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex det...    21   9.6  

>Z26319-1|CAA81228.1|  464|Apis mellifera royal jelly protein
           RJP57-2 protein.
          Length = 464

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 399 NMYYPHRSSAKCYYVS 446
           N+YY   SS   YYV+
Sbjct: 263 NLYYNSPSSENLYYVN 278


>DQ325077-1|ABD14091.1|  181|Apis mellifera complementary sex
           determiner protein.
          Length = 181

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 11/45 (24%), Positives = 21/45 (46%)
 Frame = -1

Query: 495 KEQTERKKNIDFRIDLMKHSNI*RMNDEGNTYLLNYYTIFFLQDI 361
           +E++   K I    +   H+N    N+  N Y   YY I +++ +
Sbjct: 73  RERSREPKIISSLSNKTIHNNNNYNNNNYNNYKKLYYNINYIEQV 117


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 21.0 bits (42), Expect = 7.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 399 NMYYPHRSSAKCYYVS 446
           N+YY   SS   YYV+
Sbjct: 265 NLYYSPLSSRSLYYVN 280


>DQ325130-1|ABD14144.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -1

Query: 495 KEQTERKKNIDFRIDLMKHSNI*RMNDEGNTYLLNYYTIFFLQDI 361
           +++TER+++ + +I     +N    N   N Y    Y I +++ I
Sbjct: 68  RDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQI 112


>DQ325129-1|ABD14143.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -1

Query: 495 KEQTERKKNIDFRIDLMKHSNI*RMNDEGNTYLLNYYTIFFLQDI 361
           +++TER+++ + +I     +N    N   N Y    Y I +++ I
Sbjct: 68  RDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQI 112


>DQ325128-1|ABD14142.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -1

Query: 495 KEQTERKKNIDFRIDLMKHSNI*RMNDEGNTYLLNYYTIFFLQDI 361
           +++TER+++ + +I     +N    N   N Y    Y I +++ I
Sbjct: 68  RDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQI 112


>DQ325127-1|ABD14141.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -1

Query: 495 KEQTERKKNIDFRIDLMKHSNI*RMNDEGNTYLLNYYTIFFLQDI 361
           +++TER+++ + +I     +N    N   N Y    Y I +++ I
Sbjct: 68  RDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQI 112


>DQ325125-1|ABD14139.1|  174|Apis mellifera complementary sex
           determiner protein.
          Length = 174

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 11/45 (24%), Positives = 23/45 (51%)
 Frame = -1

Query: 495 KEQTERKKNIDFRIDLMKHSNI*RMNDEGNTYLLNYYTIFFLQDI 361
           +++TER+++ + +I     +N    N   N Y    Y I +++ I
Sbjct: 68  RDRTERERSKEPKIISSLSNNYNYSNYNNNNYKQLCYNINYIEQI 112


>AY569707-1|AAS86660.1|  408|Apis mellifera complementary sex
           determiner protein.
          Length = 408

 Score = 20.6 bits (41), Expect = 9.6
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +2

Query: 89  VAALILSRLQEEAFRDVPGKVFSAARE 169
           + A  L +++ E  RD+PGK  +   E
Sbjct: 123 INATELQKIKLEIHRDLPGKSTTTTAE 149


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,563
Number of Sequences: 438
Number of extensions: 2145
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 13864083
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)