Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_M20
         (592 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    22   3.9  
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    22   3.9  
DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex det...    22   5.2  
AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.     21   6.8  

>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = -3

Query: 320 TSSAPDTGSPRLIFRNSSTTNSGGT 246
           TSSA +  + + IF+N+  TN   T
Sbjct: 73  TSSATNPNAMKTIFKNTIFTNVAST 97


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.2 bits (45), Expect = 3.9
 Identities = 7/22 (31%), Positives = 15/22 (68%)
 Frame = +1

Query: 373 SNYYDANFYNAFIFTLLKFLVC 438
           ++Y DA++  AF + ++  +VC
Sbjct: 809 NSYVDASYMIAFAYPIMLIVVC 830


>DQ325104-1|ABD14118.1|  180|Apis mellifera complementary sex
           determiner protein.
          Length = 180

 Score = 21.8 bits (44), Expect = 5.2
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 319 VSVLSNITVDHVDLTDADSNYYDANFYN 402
           +S LSN  + ++   + D+NY    +YN
Sbjct: 82  ISSLSNNYISNISNYNNDNNYNKKLYYN 109


>AB072429-1|BAB83990.1|  388|Apis mellifera IP3phosphatase protein.
          Length = 388

 Score = 21.4 bits (43), Expect = 6.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +1

Query: 1   RKNFSHYFHINI 36
           +K FSHY H N+
Sbjct: 275 KKEFSHYEHQNV 286


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 140,779
Number of Sequences: 438
Number of extensions: 2697
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17237673
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)