Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_M18
(476 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic ri... 69 8e-12
CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein. 69 8e-12
CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein. 69 8e-12
BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, larg... 69 8e-12
BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, larg... 69 8e-12
BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, larg... 69 8e-12
BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, larg... 69 8e-12
AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2 pr... 69 8e-12
U69274-1|AAD00172.1| 1053|Homo sapiens zinc finger protein protein. 32 1.2
BC111700-1|AAI11701.1| 1053|Homo sapiens zinc finger and BTB dom... 32 1.2
AB208862-1|BAD92099.1| 700|Homo sapiens zinc finger protein ZNF... 32 1.2
>M17887-1|AAA36472.1| 115|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P2 mRNA, complete cds. ).
Length = 115
Score = 68.9 bits (161), Expect = 8e-12
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = -2
Query: 421 PAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
P+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G GKL+S+
Sbjct: 18 PSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASV 65
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 474 MRYVAAYLLAVLDGKASP 421
MRYVA+YLLA L G +SP
Sbjct: 1 MRYVASYLLAALGGNSSP 18
>CR542248-1|CAG47044.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 68.9 bits (161), Expect = 8e-12
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = -2
Query: 421 PAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
P+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G GKL+S+
Sbjct: 18 PSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASV 65
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 474 MRYVAAYLLAVLDGKASP 421
MRYVA+YLLA L G +SP
Sbjct: 1 MRYVASYLLAALGGNSSP 18
>CR542212-1|CAG47008.1| 115|Homo sapiens RPLP2 protein.
Length = 115
Score = 68.9 bits (161), Expect = 8e-12
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = -2
Query: 421 PAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
P+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G GKL+S+
Sbjct: 18 PSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASV 65
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 474 MRYVAAYLLAVLDGKASP 421
MRYVA+YLLA L G +SP
Sbjct: 1 MRYVASYLLAALGGNSSP 18
>BC062314-1|AAH62314.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 68.9 bits (161), Expect = 8e-12
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = -2
Query: 421 PAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
P+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G GKL+S+
Sbjct: 18 PSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASV 65
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 474 MRYVAAYLLAVLDGKASP 421
MRYVA+YLLA L G +SP
Sbjct: 1 MRYVASYLLAALGGNSSP 18
>BC007573-1|AAH07573.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 68.9 bits (161), Expect = 8e-12
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = -2
Query: 421 PAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
P+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G GKL+S+
Sbjct: 18 PSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASV 65
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 474 MRYVAAYLLAVLDGKASP 421
MRYVA+YLLA L G +SP
Sbjct: 1 MRYVASYLLAALGGNSSP 18
>BC005920-1|AAH05920.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 68.9 bits (161), Expect = 8e-12
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = -2
Query: 421 PAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
P+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G GKL+S+
Sbjct: 18 PSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASV 65
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 474 MRYVAAYLLAVLDGKASP 421
MRYVA+YLLA L G +SP
Sbjct: 1 MRYVASYLLAALGGNSSP 18
>BC005354-1|AAH05354.1| 115|Homo sapiens ribosomal protein, large,
P2 protein.
Length = 115
Score = 68.9 bits (161), Expect = 8e-12
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = -2
Query: 421 PAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
P+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G GKL+S+
Sbjct: 18 PSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASV 65
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 474 MRYVAAYLLAVLDGKASP 421
MRYVA+YLLA L G +SP
Sbjct: 1 MRYVASYLLAALGGNSSP 18
>AB061837-1|BAB79475.1| 115|Homo sapiens ribosomal protein P2
protein.
Length = 115
Score = 68.9 bits (161), Expect = 8e-12
Identities = 31/48 (64%), Positives = 41/48 (85%)
Frame = -2
Query: 421 PAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
P+A D++KIL SVGIEAD ++L KVISELNGKN+E++I G GKL+S+
Sbjct: 18 PSAKDIKKILDSVGIEADDDRLNKVISELNGKNIEDVIAQGIGKLASV 65
Score = 30.7 bits (66), Expect = 2.7
Identities = 13/18 (72%), Positives = 15/18 (83%)
Frame = -3
Query: 474 MRYVAAYLLAVLDGKASP 421
MRYVA+YLLA L G +SP
Sbjct: 1 MRYVASYLLAALGGNSSP 18
>U69274-1|AAD00172.1| 1053|Homo sapiens zinc finger protein protein.
Length = 1053
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 442 VGRQSVPPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEEL 311
VGRQ P +++ E LSSVG ADS + + + N EL
Sbjct: 380 VGRQPEPQVSSEAESALSSVGCIADSHPEMESVDLITKNNQTEL 423
>BC111700-1|AAI11701.1| 1053|Homo sapiens zinc finger and BTB domain
containing 11 protein.
Length = 1053
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 442 VGRQSVPPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEEL 311
VGRQ P +++ E LSSVG ADS + + + N EL
Sbjct: 380 VGRQPEPQVSSEAESALSSVGCIADSHPEMESVDLITKNNQTEL 423
>AB208862-1|BAD92099.1| 700|Homo sapiens zinc finger protein
ZNF-U69274 variant protein.
Length = 700
Score = 31.9 bits (69), Expect = 1.2
Identities = 17/44 (38%), Positives = 23/44 (52%)
Frame = -2
Query: 442 VGRQSVPPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEEL 311
VGRQ P +++ E LSSVG ADS + + + N EL
Sbjct: 27 VGRQPEPQVSSEAESALSSVGCIADSHPEMESVDLITKNNQTEL 70
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 51,389,878
Number of Sequences: 237096
Number of extensions: 778877
Number of successful extensions: 5478
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 5453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5478
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4213781852
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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