Samia BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_M18
         (476 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical ...    49   2e-06
U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical pr...    45   2e-05
AC025716-15|AAO21409.1|  521|Caenorhabditis elegans Udp-glucuron...    28   3.0  
AF125459-7|AAD12836.1|  971|Caenorhabditis elegans Hypothetical ...    28   4.0  
Z75712-1|CAB00040.1|  724|Caenorhabditis elegans Hypothetical pr...    27   7.0  
U42848-5|AAN84855.1|  283|Caenorhabditis elegans Hypothetical pr...    27   7.0  
U42848-4|AAA83610.2|  302|Caenorhabditis elegans Hypothetical pr...    27   7.0  
AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical ...    27   7.0  
AF003151-4|AAK18918.2|  142|Caenorhabditis elegans Hypothetical ...    27   7.0  
AF003151-3|ABJ99067.1|  247|Caenorhabditis elegans Hypothetical ...    27   7.0  
Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical p...    27   9.2  
Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical pr...    27   9.2  
Z68301-8|CAA92626.2|  484|Caenorhabditis elegans Hypothetical pr...    27   9.2  
AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic catio...    27   9.2  

>AL132865-1|CAB60595.1|  110|Caenorhabditis elegans Hypothetical
           protein Y62E10A.1 protein.
          Length = 110

 Score = 48.8 bits (111), Expect = 2e-06
 Identities = 24/48 (50%), Positives = 32/48 (66%)
 Frame = -2

Query: 421 PAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
           P   D++ ILS+VG++AD+E  K V+S L GK VEELI  G   L S+
Sbjct: 18  PKVDDLKNILSAVGVDADAETAKLVVSRLAGKTVEELIAEGSAGLVSV 65



 Score = 33.1 bits (72), Expect = 0.11
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = -3

Query: 474 MRYVAAYLLAVLDGKASPQL 415
           MRYV+AYLLAVL G A+P++
Sbjct: 1   MRYVSAYLLAVLGGNANPKV 20


>U97194-7|AAB52450.2|  107|Caenorhabditis elegans Hypothetical
           protein C37A2.7 protein.
          Length = 107

 Score = 45.2 bits (102), Expect = 2e-05
 Identities = 20/48 (41%), Positives = 30/48 (62%)
 Frame = -2

Query: 421 PAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
           P+A DV K+L + G++ D E    V+  L GK + E+I  G+ KLSS+
Sbjct: 18  PSAQDVLKVLEAGGLDCDMENANSVVDALKGKTISEVIAQGKVKLSSV 65



 Score = 29.1 bits (62), Expect = 1.7
 Identities = 12/18 (66%), Positives = 14/18 (77%)
 Frame = -3

Query: 474 MRYVAAYLLAVLDGKASP 421
           M+Y+ AYLLA L G ASP
Sbjct: 1   MKYLGAYLLATLGGNASP 18


>AC025716-15|AAO21409.1|  521|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein31 protein.
          Length = 521

 Score = 28.3 bits (60), Expect = 3.0
 Identities = 13/36 (36%), Positives = 19/36 (52%)
 Frame = +2

Query: 59  SCYSYNINWNKTTSAASTPTLFIMKLVKKTEAHVVV 166
           +C+ + I   +TT A  T    I K + KTE HV +
Sbjct: 107 TCFEFFIQMMQTTCAEFTSNREIFKKLSKTEFHVAI 142


>AF125459-7|AAD12836.1|  971|Caenorhabditis elegans Hypothetical
           protein Y25C1A.5 protein.
          Length = 971

 Score = 27.9 bits (59), Expect = 4.0
 Identities = 10/34 (29%), Positives = 22/34 (64%)
 Frame = -2

Query: 409 DVEKILSSVGIEADSEKLKKVISELNGKNVEELI 308
           D+ ++LSS G+E   + L   +  ++ +NVE+++
Sbjct: 325 DILRVLSSPGLEVRKKTLSLALDLVSSRNVEDMV 358


>Z75712-1|CAB00040.1|  724|Caenorhabditis elegans Hypothetical
           protein K04G2.3 protein.
          Length = 724

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 12/43 (27%), Positives = 24/43 (55%)
 Frame = -2

Query: 406 VEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGKLSSM 278
           +E  +S++GI+ D ++  KV+S   G  ++ L  +  G  S +
Sbjct: 195 IESKMSAMGIDDDKKRNSKVVSTAVGYKIQILNASAEGSTSDV 237


>U42848-5|AAN84855.1|  283|Caenorhabditis elegans Hypothetical
           protein C31H1.6b protein.
          Length = 283

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 68  SYNINWNKTTSAASTPTLFIM 130
           SYNINW K     S PT  I+
Sbjct: 56  SYNINWTKLFQECSEPTYTIL 76


>U42848-4|AAA83610.2|  302|Caenorhabditis elegans Hypothetical
           protein C31H1.6a protein.
          Length = 302

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/21 (52%), Positives = 12/21 (57%)
 Frame = +2

Query: 68  SYNINWNKTTSAASTPTLFIM 130
           SYNINW K     S PT  I+
Sbjct: 75  SYNINWTKLFQECSEPTYTIL 95


>AF036706-9|AAK39281.1|  681|Caenorhabditis elegans Hypothetical
           protein T07A9.9a protein.
          Length = 681

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 12/60 (20%), Positives = 32/60 (53%)
 Frame = -2

Query: 469 LRGRVFTRRVGRQSVPPAAADVEKILSSVGIEADSEKLKKVISELNGKNVEELIEAGRGK 290
           + GR+ +R  G +    + + +E  L  +G++ D++K+K +  +     + + ++ GR +
Sbjct: 553 IAGRIGSRIHGSRKRDRSMSRLENELGELGVDVDTKKMKNLQGQCAKPQLGKKMKVGRSR 612


>AF003151-4|AAK18918.2|  142|Caenorhabditis elegans Hypothetical
           protein D1007.13a protein.
          Length = 142

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 20  NIPPIYFIETYSPSCYSYNINWNKTTSAASTPTL 121
           +IP  Y   T++PS Y  + +W  T      PT+
Sbjct: 40  SIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPTV 73


>AF003151-3|ABJ99067.1|  247|Caenorhabditis elegans Hypothetical
           protein D1007.13b protein.
          Length = 247

 Score = 27.1 bits (57), Expect = 7.0
 Identities = 11/34 (32%), Positives = 17/34 (50%)
 Frame = +2

Query: 20  NIPPIYFIETYSPSCYSYNINWNKTTSAASTPTL 121
           +IP  Y   T++PS Y  + +W  T      PT+
Sbjct: 145 SIPSTYPPSTFAPSAYPTSSSWGSTHPPEDLPTV 178


>Z83228-10|CAB05732.2|  585|Caenorhabditis elegans Hypothetical
           protein F52F12.1a protein.
          Length = 585

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
 Frame = -2

Query: 388 SVGIEADSEKLKKVISELNGK---NVEELIEA 302
           SVG  AD++K  K I+++NGK   +V+EL+++
Sbjct: 297 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 328


>Z83228-1|CAC70093.1|  568|Caenorhabditis elegans Hypothetical
           protein F52F12.1b protein.
          Length = 568

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
 Frame = -2

Query: 388 SVGIEADSEKLKKVISELNGK---NVEELIEA 302
           SVG  AD++K  K I+++NGK   +V+EL+++
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 311


>Z68301-8|CAA92626.2|  484|Caenorhabditis elegans Hypothetical
           protein W01B6.3 protein.
          Length = 484

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 9/27 (33%), Positives = 18/27 (66%)
 Frame = -3

Query: 177 ILNRTTTWASVFLTSFIIKRVGVDAAL 97
           +L+R T W SV++ SF++   G+  ++
Sbjct: 15  LLDRKTPWKSVYVVSFLLLLTGLQMSI 41


>AF110415-1|AAF21932.1|  568|Caenorhabditis elegans organic cation
           transporter 1 protein.
          Length = 568

 Score = 26.6 bits (56), Expect = 9.2
 Identities = 14/32 (43%), Positives = 24/32 (75%), Gaps = 3/32 (9%)
 Frame = -2

Query: 388 SVGIEADSEKLKKVISELNGK---NVEELIEA 302
           SVG  AD++K  K I+++NGK   +V+EL+++
Sbjct: 280 SVGKWADAKKQLKKIAKMNGKSNVDVDELVDS 311


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,854,493
Number of Sequences: 27780
Number of extensions: 115207
Number of successful extensions: 400
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 394
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 400
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)