Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_M17
(459 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117; Eukar... 267 7e-71
UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27; Euka... 229 3e-59
UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=... 194 8e-49
UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillar... 167 1e-40
UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal ... 165 4e-40
UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17; ... 144 6e-34
UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1; Encepha... 129 3e-29
UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7; A... 128 8e-29
UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19; ... 122 3e-27
UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2; A... 122 3e-27
UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1; Can... 119 3e-26
UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=... 118 5e-26
UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1; Cenar... 116 2e-25
UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole gen... 107 2e-22
UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4; T... 102 3e-21
UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultu... 98 7e-20
UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6; H... 90 2e-17
UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13 prot... 84 2e-15
UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 - R... 53 3e-06
UniRef50_Q6CWX5 Cluster: Similar to sp|Q9C2M3 Neurospora crassa ... 40 0.034
UniRef50_A3QMJ6 Cluster: Putative uncharacterized protein; n=1; ... 37 0.24
UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic D-r... 36 0.56
UniRef50_Q4UAK4 Cluster: Putative uncharacterized protein; n=1; ... 36 0.56
UniRef50_A5V7X6 Cluster: TonB-dependent receptor precursor; n=1;... 35 0.97
UniRef50_Q9W3G1 Cluster: CG10555-PA; n=2; Drosophila melanogaste... 35 0.97
UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7; E... 35 0.97
UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2; C... 34 1.7
UniRef50_Q3K4Q8 Cluster: Putative uncharacterized protein; n=1; ... 33 2.2
UniRef50_A7HJW5 Cluster: Putative uncharacterized protein; n=2; ... 33 2.2
UniRef50_Q5P8U4 Cluster: Helicase/SNF2 family domain protein; n=... 33 3.9
UniRef50_Q58MZ4 Cluster: T4-like baseplate tail tube cap; n=1; C... 33 3.9
UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisia... 33 3.9
UniRef50_Q6D8R0 Cluster: Putative membrane protein; n=1; Pectoba... 32 5.2
UniRef50_A3VN55 Cluster: 3-dehydroquinate synthase; n=3; Alphapr... 32 5.2
UniRef50_A7PK49 Cluster: Chromosome chr15 scaffold_19, whole gen... 32 5.2
UniRef50_A0L4Q5 Cluster: Transcriptional regulator, AraC family;... 32 6.8
UniRef50_Q0INQ1 Cluster: Os12g0413400 protein; n=2; Oryza sativa... 32 6.8
UniRef50_Q960E6 Cluster: SD04748p; n=9; Eukaryota|Rep: SD04748p ... 32 6.8
UniRef50_Q0V7F1 Cluster: Putative uncharacterized protein; n=1; ... 32 6.8
UniRef50_UPI000058808D Cluster: PREDICTED: similar to trnS; n=1;... 31 9.0
UniRef50_Q0HVV5 Cluster: Putative uncharacterized protein; n=18;... 31 9.0
UniRef50_A0LD47 Cluster: Phosphonate ABC transporter, periplasmi... 31 9.0
UniRef50_A5C3C0 Cluster: Putative uncharacterized protein; n=1; ... 31 9.0
UniRef50_A4H3N1 Cluster: Putative uncharacterized protein; n=2; ... 31 9.0
UniRef50_Q7SA74 Cluster: Predicted protein; n=1; Neurospora cras... 31 9.0
UniRef50_A6QZZ0 Cluster: Predicted protein; n=1; Ajellomyces cap... 31 9.0
>UniRef50_P62277 Cluster: 40S ribosomal protein S13; n=117;
Eukaryota|Rep: 40S ribosomal protein S13 - Homo sapiens
(Human)
Length = 151
Score = 267 bits (655), Expect = 7e-71
Identities = 125/146 (85%), Positives = 138/146 (94%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
MGRMH GKG+SQSALPYRRSVPTW+KLT+DD+KEQI+KL KKGLTPSQIGV+LRDSHG
Sbjct: 1 MGRMHAP-GKGLSQSALPYRRSVPTWLKLTSDDVKEQIYKLAKKGLTPSQIGVILRDSHG 59
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
VAQVRF TG KILRI+K+ GLAPDLPEDLY+LIKKAVA+RKHLERNRKDKD+KFRLIL+E
Sbjct: 60 VAQVRFVTGNKILRILKSKGLAPDLPEDLYHLIKKAVAVRKHLERNRKDKDAKFRLILIE 119
Query: 380 SRIHRLARYYQTKSVLPPNWKYESST 457
SRIHRLARYY+TK VLPPNWKYESST
Sbjct: 120 SRIHRLARYYKTKRVLPPNWKYESST 145
>UniRef50_P59223 Cluster: 40S ribosomal protein S13-1; n=27;
Eukaryota|Rep: 40S ribosomal protein S13-1 - Arabidopsis
thaliana (Mouse-ear cress)
Length = 151
Score = 229 bits (559), Expect = 3e-59
Identities = 109/146 (74%), Positives = 123/146 (84%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
MGRMH GKGIS SALPY+RS P+W+K T D+ E I K KKGLTPSQIGV+LRDSHG
Sbjct: 1 MGRMHSR-GKGISASALPYKRSSPSWLKTTPQDVDESICKFAKKGLTPSQIGVILRDSHG 59
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
+ QV+ TG KILRI+KA GLAP++PEDLY+LIKKAVA+RKHLERNRKDKDSKFRLILVE
Sbjct: 60 IPQVKSVTGSKILRILKAHGLAPEIPEDLYHLIKKAVAIRKHLERNRKDKDSKFRLILVE 119
Query: 380 SRIHRLARYYQTKSVLPPNWKYESST 457
SRIHRLARYY+ LPP WKYES+T
Sbjct: 120 SRIHRLARYYKKTKKLPPVWKYESTT 145
>UniRef50_Q4Q3M1 Cluster: 40S ribosomal protein S13, putative; n=39;
Eukaryota|Rep: 40S ribosomal protein S13, putative -
Leishmania major
Length = 151
Score = 194 bits (473), Expect = 8e-49
Identities = 89/146 (60%), Positives = 116/146 (79%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
M RMHG G+G + SALPYRR+ P W+K+ + ++ + + K +KG+ PSQIG+ LRDS G
Sbjct: 1 MVRMHGN-GRGKASSALPYRRTPPAWLKIASRNVVKMVCKSSRKGMMPSQIGMELRDSMG 59
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
+AQV+ TG+KILRI+K GLAP++PEDLY+L+K+A MRKHLER+ D+D+K+RLILVE
Sbjct: 60 IAQVKNVTGRKILRILKHNGLAPEIPEDLYFLVKRATQMRKHLERHTTDRDTKYRLILVE 119
Query: 380 SRIHRLARYYQTKSVLPPNWKYESST 457
SRIHRLARYY+ LPP WKYESST
Sbjct: 120 SRIHRLARYYKRVKQLPPTWKYESST 145
>UniRef50_Q9AW88 Cluster: 40S ribosomal protein S13; n=1; Guillardia
theta|Rep: 40S ribosomal protein S13 - Guillardia theta
(Cryptomonas phi)
Length = 147
Score = 167 bits (406), Expect = 1e-40
Identities = 76/136 (55%), Positives = 103/136 (75%)
Frame = +2
Query: 47 KGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFGTG 226
KGI+ S +P+ R+ P WVK + + I E I L KKGL PSQIG LRDS G+ V+ G
Sbjct: 6 KGIASSLIPFERNAPLWVKDSKEKINEIICNLAKKGLVPSQIGSYLRDSAGIPLVKNIAG 65
Query: 227 KKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARY 406
+ I++I+K GL P++PEDL++LIKKA+ ++KHLERN+KDKDSKFRLIL ES+IHRL+RY
Sbjct: 66 RNIVKILKKNGLNPEIPEDLFFLIKKAINIKKHLERNKKDKDSKFRLILTESKIHRLSRY 125
Query: 407 YQTKSVLPPNWKYESS 454
Y+ +P NW+++SS
Sbjct: 126 YKRIQRIPINWRFDSS 141
>UniRef50_UPI0000DA1E7F Cluster: PREDICTED: similar to ribosomal
protein S13; n=2; Rattus norvegicus|Rep: PREDICTED:
similar to ribosomal protein S13 - Rattus norvegicus
Length = 131
Score = 165 bits (401), Expect = 4e-40
Identities = 89/144 (61%), Positives = 102/144 (70%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
MG MH K +SQS LPY SV W+K T+DD+KEQI+KL KKGLTPSQIGV LRD+HG
Sbjct: 1 MGAMHAPR-KALSQSVLPYHHSVLMWLKSTSDDMKEQIYKLAKKGLTPSQIGVTLRDTHG 59
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
LA DLP DLY+LIKKAVA++KHLERNRKDKD+KF L L E
Sbjct: 60 --------------------LALDLPGDLYHLIKKAVAVQKHLERNRKDKDAKFCLSLTE 99
Query: 380 SRIHRLARYYQTKSVLPPNWKYES 451
SRIH LARY +TK +LPP+WKYES
Sbjct: 100 SRIHPLARYCKTKRMLPPSWKYES 123
>UniRef50_P54012 Cluster: 30S ribosomal protein S15P/S13e; n=17;
Euryarchaeota|Rep: 30S ribosomal protein S15P/S13e -
Methanococcus jannaschii
Length = 153
Score = 144 bits (350), Expect = 6e-34
Identities = 69/146 (47%), Positives = 100/146 (68%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
M RMH +G S S P R+ VP WV+ T + +++ + +L KKG +QIG++LRD++G
Sbjct: 1 MARMHARK-RGRSGSKRPVRKEVPEWVQYTPEQVEQLVVELAKKGYQSAQIGLILRDTYG 59
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
+ V+ TGKKI +IMK GL P +PEDL L+++AV +RKHLE++ KD SK L L+E
Sbjct: 60 IPDVKLITGKKISKIMKEHGLYPKVPEDLLNLMRRAVNLRKHLEQHPKDLHSKRGLQLIE 119
Query: 380 SRIHRLARYYQTKSVLPPNWKYESST 457
S+I RL +YY++K VLP +W+Y T
Sbjct: 120 SKIRRLVKYYKSKGVLPADWRYTPET 145
>UniRef50_Q8SRB3 Cluster: 40S ribosomal protein S13; n=1;
Encephalitozoon cuniculi|Rep: 40S ribosomal protein S13
- Encephalitozoon cuniculi
Length = 148
Score = 129 bits (311), Expect = 3e-29
Identities = 59/141 (41%), Positives = 87/141 (61%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
M +MH + GKG S S PY + PTW+ + D+IK + ++G KG+ IG LRD +G
Sbjct: 1 MAKMHSS-GKGRSGSVKPYATAFPTWLTKSVDEIKSDVIQMGNKGVPAPDIGTRLRDEYG 59
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
+ + G+ I R ++ G+ P +P DL L+ +A +R HL RKD +K+RLILV
Sbjct: 60 IGKASDVLGESITRFLQRNGVVPKIPHDLESLVHRANTLRSHLNIYRKDNSAKYRLILVS 119
Query: 380 SRIHRLARYYQTKSVLPPNWK 442
SR++R+ARYY+ K +P NWK
Sbjct: 120 SRMYRVARYYKRKMRIPGNWK 140
>UniRef50_O29457 Cluster: 30S ribosomal protein S15P/S13e; n=7;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Archaeoglobus fulgidus
Length = 152
Score = 128 bits (308), Expect = 8e-29
Identities = 63/142 (44%), Positives = 95/142 (66%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
M R+H +G S S YR S P WV ++ +++++++ +L +G PS IG++LRD +G
Sbjct: 1 MARIHARR-RGKSGSKRIYRDSPPEWVDMSPEEVEKKVLELYNEGYEPSMIGMILRDRYG 59
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
+ V+ TGKKI +I+K G+ PEDL LIKKA+ +R HLE +RKDK ++ L L+E
Sbjct: 60 IPSVKQVTGKKIQKILKEHGVEIKYPEDLKALIKKALKLRAHLEVHRKDKHNRRGLQLIE 119
Query: 380 SRIHRLARYYQTKSVLPPNWKY 445
++I RL+ YY+ K VLP +WKY
Sbjct: 120 AKIWRLSSYYKEKGVLPADWKY 141
>UniRef50_Q9V2K9 Cluster: 30S ribosomal protein S15P/S13e; n=19;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Pyrococcus abyssi
Length = 158
Score = 122 bits (295), Expect = 3e-27
Identities = 64/150 (42%), Positives = 95/150 (63%), Gaps = 7/150 (4%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
M RMH +G S S P R + P W++ T +DI+ + KL K+G + + IG +LRD +G
Sbjct: 1 MARMHARK-RGKSGSKRPPRTAPPIWLEYTVEDIENLVVKLRKEGYSTAMIGTILRDQYG 59
Query: 200 VAQVRF-----GTGKK--ILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSK 358
+ V+ +K I RI++ GLAP++PEDL +LIK+AV +RKHLE++ KD S
Sbjct: 60 IPTVKLFRDPDNPNRKLTITRILEKHGLAPEIPEDLMFLIKRAVNLRKHLEQHPKDLHSM 119
Query: 359 FRLILVESRIHRLARYYQTKSVLPPNWKYE 448
L L+ES+I RL +YY+ K LP +W+Y+
Sbjct: 120 RGLQLIESKIRRLVKYYKRKGKLPKDWRYD 149
>UniRef50_Q74MB8 Cluster: 30S ribosomal protein S15P/S13e; n=2;
Archaea|Rep: 30S ribosomal protein S15P/S13e -
Nanoarchaeum equitans
Length = 154
Score = 122 bits (295), Expect = 3e-27
Identities = 58/143 (40%), Positives = 87/143 (60%), Gaps = 1/143 (0%)
Frame = +2
Query: 20 MGRMHGTLG-KGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSH 196
M R+H G S S P R + P W + ++ +I +L K+G +P+ IG++LRD +
Sbjct: 1 MSRLHAHKRYHGQSGSKRPLRTTKPEWAPYDKEFVENKIIELAKQGYSPAMIGLILRDQY 60
Query: 197 GVAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 376
G+ VR GK + ++ GL PD+P DL YL+K+A + KH+E N +D +K L+
Sbjct: 61 GIPDVRLYIGKSLQDFLEEKGLLPDIPWDLIYLLKRAYRVYKHIELNPRDTQAKRNYQLI 120
Query: 377 ESRIHRLARYYQTKSVLPPNWKY 445
S+IHRLA+YY+ K VLP +WKY
Sbjct: 121 ISKIHRLAKYYKRKGVLPKDWKY 143
>UniRef50_A7DPJ7 Cluster: Ribosomal S13S15-like protein; n=1;
Candidatus Nitrosopumilus maritimus SCM1|Rep: Ribosomal
S13S15-like protein - Candidatus Nitrosopumilus
maritimus SCM1
Length = 149
Score = 119 bits (287), Expect = 3e-26
Identities = 58/144 (40%), Positives = 89/144 (61%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
MGRMH T G S S P P+W+ + +I+E + K K GLTPSQIG+ LRD H
Sbjct: 1 MGRMH-THRHGKSHSIRPATLRAPSWITQSPAEIEELVIKYSKDGLTPSQIGIKLRDQHS 59
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
+ ++ T K I I++ L ++PEDL ++KKAV +++HL+ N+ D+ + L L+E
Sbjct: 60 IPLIKPITKKTIGEILEENDLKAEMPEDLENIVKKAVGLQRHLKENKGDRRNVRSLELIE 119
Query: 380 SRIHRLARYYQTKSVLPPNWKYES 451
+++HRL+ YY+ +P WKY+S
Sbjct: 120 AKVHRLSVYYKKIGRIPATWKYKS 143
>UniRef50_Q40939 Cluster: Small subunit ribosomal protein S13; n=1;
Bigelowiella natans|Rep: Small subunit ribosomal protein
S13 - Bigelowiella natans (Pedinomonas minutissima)
(Chlorarachnion sp.(strain CCMP 621))
Length = 183
Score = 118 bits (285), Expect = 5e-26
Identities = 63/146 (43%), Positives = 92/146 (63%), Gaps = 1/146 (0%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKG-LTPSQIGVMLRDSH 196
MG+M+ GKGIS + +PYR+ W LT+ ++ + I L K L PS+IG++LRD
Sbjct: 1 MGKMYSK-GKGISSTTVPYRKYSCEWKGLTSQNLIKIIANLAKNNNLPPSKIGLVLRDEK 59
Query: 197 GVAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILV 376
V R +G I +I++ GL P +PEDL+YLIKKA ++ HL + D +++ L L+
Sbjct: 60 LVVDTRNISGMNISKILRLKGLVPLVPEDLFYLIKKANKIKAHLSDFKHDLANRYHLNLI 119
Query: 377 ESRIHRLARYYQTKSVLPPNWKYESS 454
ES I+RL+RYY+ LP NWKY S+
Sbjct: 120 ESHIYRLSRYYKRIFRLPKNWKYISN 145
>UniRef50_A0RTT1 Cluster: Ribosomal protein S15P/S13E; n=1;
Cenarchaeum symbiosum|Rep: Ribosomal protein S15P/S13E -
Cenarchaeum symbiosum
Length = 148
Score = 116 bits (280), Expect = 2e-25
Identities = 57/144 (39%), Positives = 88/144 (61%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
MGR+H G S S P P+W++ ++++ I K K+GL PSQIG LRD H
Sbjct: 1 MGRLHSHR-HGKSHSIRPSSPKAPSWIQ-GPGEVEDLIVKYAKEGLAPSQIGSKLRDQHA 58
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
+ R TGK + +IM+ G P+LPEDL +++KAV +++HL N+ D+ + L L+E
Sbjct: 59 IPLTRPITGKSVTQIMEEHGATPELPEDLNNIVQKAVGLQRHLRANKGDRRNVRSLELIE 118
Query: 380 SRIHRLARYYQTKSVLPPNWKYES 451
+++HRL YY+ +P +WKY+S
Sbjct: 119 AKVHRLDVYYKRIGRIPKDWKYKS 142
>UniRef50_A7QVA3 Cluster: Chromosome chr2 scaffold_187, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr2 scaffold_187, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 129
Score = 107 bits (256), Expect = 2e-22
Identities = 48/61 (78%), Positives = 55/61 (90%)
Frame = +2
Query: 260 LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYQTKSVLPPNW 439
L P++PEDLY+LIKKAVA+RKHLER+RKDKDSKFRLI+VESRIHRLARYY+ LPP W
Sbjct: 69 LGPEIPEDLYHLIKKAVAIRKHLERSRKDKDSKFRLIVVESRIHRLARYYKRTKKLPPVW 128
Query: 440 K 442
K
Sbjct: 129 K 129
>UniRef50_Q6L2H3 Cluster: 30S ribosomal protein S15P/S13e; n=4;
Thermoplasmatales|Rep: 30S ribosomal protein S15P/S13e -
Picrophilus torridus
Length = 146
Score = 102 bits (245), Expect = 3e-21
Identities = 55/143 (38%), Positives = 83/143 (58%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
M RMH T +G S S R P+W++ + D+IKE I K+ K+G+T S IG+ LRD +
Sbjct: 1 MARMH-TRKRGRSGSKRIEVRERPSWIQYSDDEIKEMIVKMRKQGMTKSMIGIRLRDQYA 59
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
+ R K+ +++K L D+PEDL LI++ KHL N+ D ++K + L+
Sbjct: 60 IPGTRPVLHMKLGQVLKENNLESDVPEDLQALIERYKRAMKHLSLNKHDMNNKRKAQLIM 119
Query: 380 SRIHRLARYYQTKSVLPPNWKYE 448
S++ RL RYY+ S LP +W E
Sbjct: 120 SKMLRLIRYYKRTSRLPQDWSLE 142
>UniRef50_Q9P9B8 Cluster: 30S ribosomal protein S15; n=1; uncultured
marine group II euryarchaeote 37F11|Rep: 30S ribosomal
protein S15 - uncultured marine group II euryarchaeote
37F11
Length = 151
Score = 98.3 bits (234), Expect = 7e-20
Identities = 51/143 (35%), Positives = 81/143 (56%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHG 199
M RM+ + +G S S+ P+ P W A +I+ I + K G++ +QIG +LRD H
Sbjct: 1 MARMYASK-RGKSGSSKPFMTEAPEWSNKDAKEIESLILQYFKDGMSTAQIGTILRDKHA 59
Query: 200 VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVE 379
V VR GK+I ++ + PEDL L+++AVA+ +HL N +D +K L L E
Sbjct: 60 VPNVRLVLGKRIGAVLSENDESGTYPEDLMNLMRQAVAIIEHLTTNSRDLHNKRSLELTE 119
Query: 380 SRIHRLARYYQTKSVLPPNWKYE 448
++I RL YY+ + L +W+Y+
Sbjct: 120 AKIRRLGNYYKAEGRLDSDWRYK 142
>UniRef50_P05762 Cluster: 30S ribosomal protein S15P/S13e; n=6;
Halobacteriaceae|Rep: 30S ribosomal protein S15P/S13e -
Haloarcula marismortui (Halobacterium marismortui)
Length = 156
Score = 89.8 bits (213), Expect = 2e-17
Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 4/139 (2%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDS-- 193
M RMH T +G S S P P W + D I+ ++ +L ++G +PS+IG+ LRD
Sbjct: 1 MARMH-TRRRGSSDSDKPAADEPPEWSDVDEDAIEARVVELAEQGHSPSEIGLKLRDEGV 59
Query: 194 HG--VAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 367
G + V TGKK+ I++ PDLPEDL L+++AV +R H++ N D +K L
Sbjct: 60 QGTPIPDVSLATGKKVTEILEENEAEPDLPEDLRNLLERAVRLRDHMDENPGDYQNKRAL 119
Query: 368 ILVESRIHRLARYYQTKSV 424
+S+I RL YY+ V
Sbjct: 120 QNTQSKIRRLIDYYRGDEV 138
>UniRef50_UPI0000E23CD6 Cluster: PREDICTED: similar to Rps13
protein; n=2; Pan troglodytes|Rep: PREDICTED: similar to
Rps13 protein - Pan troglodytes
Length = 269
Score = 83.8 bits (198), Expect = 2e-15
Identities = 39/56 (69%), Positives = 48/56 (85%)
Frame = +2
Query: 23 GRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRD 190
GR+H GKG+S+SAL Y SVPTW+KLT+D++KEQI+KL KKGLTP QIGV+LRD
Sbjct: 215 GRIH-VPGKGLSRSALLYHHSVPTWLKLTSDNVKEQIYKLTKKGLTPPQIGVILRD 269
>UniRef50_Q7TP70 Cluster: Ab2-079; n=3; Eutheria|Rep: Ab2-079 -
Rattus norvegicus (Rat)
Length = 481
Score = 53.2 bits (122), Expect = 3e-06
Identities = 24/35 (68%), Positives = 29/35 (82%)
Frame = +2
Query: 20 MGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIK 124
+GRMH GKG+SQSALPYRRSV W+KL +DD+K
Sbjct: 444 VGRMHAP-GKGLSQSALPYRRSVLMWLKLMSDDVK 477
>UniRef50_Q6CWX5 Cluster: Similar to sp|Q9C2M3 Neurospora crassa
Related to kinesin-like protein KIF1C; n=1;
Kluyveromyces lactis|Rep: Similar to sp|Q9C2M3
Neurospora crassa Related to kinesin-like protein KIF1C
- Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 456
Score = 39.5 bits (88), Expect = 0.034
Identities = 33/120 (27%), Positives = 59/120 (49%), Gaps = 7/120 (5%)
Frame = +2
Query: 17 NMGRMHGTLGKGISQSA------LPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGV 178
N+ + TLG+ ISQ A +PYR S+ TWV +KE + K + +
Sbjct: 239 NINKSLSTLGRCISQLAKNSKHLIPYRDSLLTWV------LKENLGGNSKTCMIACISPI 292
Query: 179 MLRDSHGVAQVRFGTGKKILRIMKAMG-LAPDLPEDLYYLIKKAVAMRKHLERNRKDKDS 355
L +S ++ +R+ T K +++ M + P++ ED+ ++ A + RK LE + + S
Sbjct: 293 DLEES--LSTLRYATTAKEIKLRATMNEIVPNINEDMKAAVEAAASSRKELEMLKSEMSS 350
>UniRef50_A3QMJ6 Cluster: Putative uncharacterized protein; n=1; Koi
herpesvirus|Rep: Putative uncharacterized protein - Koi
herpesvirus
Length = 579
Score = 36.7 bits (81), Expect = 0.24
Identities = 29/101 (28%), Positives = 46/101 (45%), Gaps = 1/101 (0%)
Frame = +2
Query: 26 RMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGV- 202
R H LG +++ LPY+ V + +KL A + + K G+ ++ +RD H V
Sbjct: 436 RAHARLGAELTR--LPYKSYVASSIKLRAACGPKYAEDVAKPGVEKVEVDDFVRDCHSVC 493
Query: 203 AQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKH 325
R G G+ + R K L P+ EDL ++ A H
Sbjct: 494 VDHRMGDGRLVCRTHKVACL-PNDHEDLVREVRARTAALMH 533
>UniRef50_Q8FV54 Cluster: Ribose ABC transporter, periplasmic
D-ribose-binding protein; n=4; Rhizobiales|Rep: Ribose
ABC transporter, periplasmic D-ribose-binding protein -
Brucella suis
Length = 355
Score = 35.5 bits (78), Expect = 0.56
Identities = 17/44 (38%), Positives = 28/44 (63%)
Frame = +2
Query: 83 SVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVR 214
+VPTW+K T D I +++ +L K+GL +M+ D+ G AQ +
Sbjct: 57 AVPTWMKQTEDTIVDEVAQLKKEGLVKD---LMITDAQGNAQTQ 97
>UniRef50_Q4UAK4 Cluster: Putative uncharacterized protein; n=1;
Theileria annulata|Rep: Putative uncharacterized protein
- Theileria annulata
Length = 424
Score = 35.5 bits (78), Expect = 0.56
Identities = 30/124 (24%), Positives = 58/124 (46%), Gaps = 1/124 (0%)
Frame = +2
Query: 17 NMGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSH 196
N+ G +GKG S + P+ + T +K T +KE +F G+ GV D
Sbjct: 292 NIEDSKGVVGKGASTNDAPFGSNTGTNIKETPLGVKEDLF-----GVKEDLFGVK-EDLF 345
Query: 197 GVAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKD-SKFRLIL 373
GV + FG + + ++ +G A + ED + + + + N + D +KF+L++
Sbjct: 346 GVKEDLFGVKEDLFGVVGTVG-ASTVTEDTVTVQQMYKNLMNNKLCNGNESDFNKFKLLI 404
Query: 374 VESR 385
+ ++
Sbjct: 405 LNNK 408
>UniRef50_A5V7X6 Cluster: TonB-dependent receptor precursor; n=1;
Sphingomonas wittichii RW1|Rep: TonB-dependent receptor
precursor - Sphingomonas wittichii RW1
Length = 818
Score = 34.7 bits (76), Expect = 0.97
Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = +2
Query: 41 LGKGISQS-ALPYRRSVPTWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRF 217
+G+G++ + YR + PTW + K IF L GL + RD++G+ +R
Sbjct: 707 IGEGLNLTFRADYRITGPTWFSTVQNQTKRSIFDLFFPGLGTGEYAKSRRDAYGILDLRA 766
Query: 218 G 220
G
Sbjct: 767 G 767
>UniRef50_Q9W3G1 Cluster: CG10555-PA; n=2; Drosophila
melanogaster|Rep: CG10555-PA - Drosophila melanogaster
(Fruit fly)
Length = 926
Score = 34.7 bits (76), Expect = 0.97
Identities = 15/31 (48%), Positives = 21/31 (67%), Gaps = 4/31 (12%)
Frame = +1
Query: 1 YNKKPQYGSYARHP----WQGYIPVGAAVPP 81
Y++ PQ G YA++P +QGY P GA +PP
Sbjct: 874 YHQPPQAGGYAQYPPTQGYQGYRPAGAQMPP 904
>UniRef50_A1CL62 Cluster: Ribosomal protein S15, putative; n=7;
Eurotiomycetidae|Rep: Ribosomal protein S15, putative -
Aspergillus clavatus
Length = 306
Score = 34.7 bits (76), Expect = 0.97
Identities = 16/51 (31%), Positives = 27/51 (52%)
Frame = +2
Query: 293 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYQTKSVLPPNWKY 445
L K + + +HL+ KDK +K L L+ + +L RY + K P W++
Sbjct: 238 LTAKIINLSRHLQSTNKDKHNKRNLRLLVHKRQKLLRYLRKKERGGPRWQH 288
>UniRef50_Q5CYT2 Cluster: 3CCCH domain containing protein; n=2;
Cryptosporidium|Rep: 3CCCH domain containing protein -
Cryptosporidium parvum Iowa II
Length = 591
Score = 33.9 bits (74), Expect = 1.7
Identities = 22/64 (34%), Positives = 34/64 (53%)
Frame = +2
Query: 92 TWVKLTADDIKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFGTGKKILRIMKAMGLAPD 271
T +++T D K + + K G+ GV+ R +HG A++R T K +LR K L P
Sbjct: 154 TELRVTNDFYKTSVCRYWKMGVK-CDAGVLCRHAHGEAELRKKTNKHLLR-RKDDQLPPS 211
Query: 272 LPED 283
+ ED
Sbjct: 212 IRED 215
>UniRef50_Q3K4Q8 Cluster: Putative uncharacterized protein; n=1;
Pseudomonas fluorescens PfO-1|Rep: Putative
uncharacterized protein - Pseudomonas fluorescens
(strain PfO-1)
Length = 388
Score = 33.5 bits (73), Expect = 2.2
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Frame = -3
Query: 385 PGFNKNQPEFAVLVLPITFQMFPHGDSLLDQVVQIFR*IRSK-THSFHDTQ----DLFTS 221
PG NK +F V +LP + P G SL + + + ++S+ H+ + DL
Sbjct: 178 PGSNKASDDFVVGLLPTQLGICPSGASLYENLQTVINAVKSQIPHARFILRPYMADLQHP 237
Query: 220 TKSDLCNTMRVPEHDT--DLGRSKTLF 146
T DLCN + E T G S T+F
Sbjct: 238 TLKDLCNQLSAYEWITIDTTGTSSTVF 264
>UniRef50_A7HJW5 Cluster: Putative uncharacterized protein; n=2;
Thermotogaceae|Rep: Putative uncharacterized protein -
Fervidobacterium nodosum Rt17-B1
Length = 96
Score = 33.5 bits (73), Expect = 2.2
Identities = 16/48 (33%), Positives = 26/48 (54%)
Frame = +2
Query: 215 FGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSK 358
FGTGK L I +GLA + + Y++K+ K +R +K K+ +
Sbjct: 48 FGTGKIFLIIFVFLGLASGIYNGIKYILKEVEKYEKEEQREQKSKNDE 95
>UniRef50_Q5P8U4 Cluster: Helicase/SNF2 family domain protein; n=1;
Azoarcus sp. EbN1|Rep: Helicase/SNF2 family domain
protein - Azoarcus sp. (strain EbN1) (Aromatoleum
aromaticum (strain EbN1))
Length = 883
Score = 32.7 bits (71), Expect = 3.9
Identities = 21/61 (34%), Positives = 34/61 (55%), Gaps = 1/61 (1%)
Frame = +2
Query: 119 IKEQIFKLGKKGLTPSQIGVMLRDSHGVAQVRFGT-GKKILRIMKAMGLAPDLPEDLYYL 295
+ +++ +L + G T S V LR+ H V + + +K+ IM A+G A D PEDL L
Sbjct: 561 LHQRVGRLNRYGQTQSVEVVSLRNPHTVESMIWEKLEEKLGNIMLALGSAMDEPEDLLQL 620
Query: 296 I 298
+
Sbjct: 621 V 621
>UniRef50_Q58MZ4 Cluster: T4-like baseplate tail tube cap; n=1;
Cyanophage P-SSM2|Rep: T4-like baseplate tail tube cap -
Cyanophage P-SSM2
Length = 386
Score = 32.7 bits (71), Expect = 3.9
Identities = 15/33 (45%), Positives = 20/33 (60%)
Frame = -1
Query: 153 PFLPSLKICSLISSAVSFTQVGTLRRYGSADWD 55
PFL S K C+L S +V++T GT YG+ D
Sbjct: 322 PFLNSFKPCALTSFSVNYTGAGTYASYGTGGDD 354
>UniRef50_A2QE31 Cluster: Remark: alternate name for S. cerevisiae
MRPS28: YDR337w. precursor; n=1; Aspergillus niger|Rep:
Remark: alternate name for S. cerevisiae MRPS28:
YDR337w. precursor - Aspergillus niger
Length = 280
Score = 32.7 bits (71), Expect = 3.9
Identities = 15/50 (30%), Positives = 27/50 (54%)
Frame = +2
Query: 293 LIKKAVAMRKHLERNRKDKDSKFRLILVESRIHRLARYYQTKSVLPPNWK 442
L K + + +HL+ +KD+ +K L L+ + +L RY + K P W+
Sbjct: 212 LTAKIMNLSRHLQTTKKDRHNKRNLRLLVHKRQKLLRYLRRKERGGPRWQ 261
>UniRef50_Q6D8R0 Cluster: Putative membrane protein; n=1;
Pectobacterium atrosepticum|Rep: Putative membrane
protein - Erwinia carotovora subsp. atroseptica
(Pectobacterium atrosepticum)
Length = 458
Score = 32.3 bits (70), Expect = 5.2
Identities = 18/43 (41%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Frame = -1
Query: 324 CFLMATAFL-IR*YKSSGRSGARPIAFMIRRIFLPVPNLTCAT 199
CF +AT ++ + K S R+GA +AF I +FL LT AT
Sbjct: 173 CFFLATKYIPVATTKESSRTGAYEVAFPILMLFLVAFMLTTAT 215
>UniRef50_A3VN55 Cluster: 3-dehydroquinate synthase; n=3;
Alphaproteobacteria|Rep: 3-dehydroquinate synthase -
Parvularcula bermudensis HTCC2503
Length = 371
Score = 32.3 bits (70), Expect = 5.2
Identities = 16/52 (30%), Positives = 32/52 (61%)
Frame = +2
Query: 227 KKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRLILVES 382
K++ R++ GL P P+D+ LI A R +++++K + + RL+L+E+
Sbjct: 291 KRVERMIADSGL-PTRPQDIPGLITSAAEQRAFMQQDKKVEAGQLRLVLLEA 341
>UniRef50_A7PK49 Cluster: Chromosome chr15 scaffold_19, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr15 scaffold_19, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 602
Score = 32.3 bits (70), Expect = 5.2
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 1/91 (1%)
Frame = +2
Query: 2 IIKSRNMGRMHGTLGKGISQSALPYRRSVPTWVKLTADDIKEQIFK-LGKKGLTPSQIGV 178
++++R + G G S +A+ Y + +VK+ D +++ + KKG+ P I
Sbjct: 65 VVEARKL--FDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITF 122
Query: 179 MLRDSHGVAQVRFGTGKKILRIMKAMGLAPD 271
+ S R G ++L+ + +GL PD
Sbjct: 123 NILVSGHYKYGREEDGDRLLKDISVLGLLPD 153
>UniRef50_A0L4Q5 Cluster: Transcriptional regulator, AraC family;
n=1; Magnetococcus sp. MC-1|Rep: Transcriptional
regulator, AraC family - Magnetococcus sp. (strain MC-1)
Length = 241
Score = 31.9 bits (69), Expect = 6.8
Identities = 21/54 (38%), Positives = 30/54 (55%)
Frame = -3
Query: 172 DLGRSKTLFAKFEDLFLNIISG*FHPGRDTAAVRQRRLGYTLAKGAVHTTHIAA 11
D GRS L AK +LF+ +++ GR TAA RR+ LA+ +H +AA
Sbjct: 104 DAGRSMFLRAKVVELFVELLARPHAQGRFTAAFAARRI---LARDPLHMPTMAA 154
>UniRef50_Q0INQ1 Cluster: Os12g0413400 protein; n=2; Oryza sativa
(japonica cultivar-group)|Rep: Os12g0413400 protein -
Oryza sativa subsp. japonica (Rice)
Length = 196
Score = 31.9 bits (69), Expect = 6.8
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 3/76 (3%)
Frame = +2
Query: 218 GTGKKILRIMKAMGLAPDLPEDLYYL-IKKAVAMRKHLERNRKDKDSKFRL--ILVESRI 388
G+G ++ R M G P + + I+ A A R E +R+ + + R+ R
Sbjct: 51 GSGDEVRRTMTTSGSVSSSPAERGGVQIRAAAAARPGGEESRRRRSEEGRVGSARPRGRR 110
Query: 389 HRLARYYQTKSVLPPN 436
HR +RY T++ +PP+
Sbjct: 111 HRRSRYLATRAAVPPS 126
>UniRef50_Q960E6 Cluster: SD04748p; n=9; Eukaryota|Rep: SD04748p -
Drosophila melanogaster (Fruit fly)
Length = 1049
Score = 31.9 bits (69), Expect = 6.8
Identities = 12/28 (42%), Positives = 17/28 (60%)
Frame = +1
Query: 196 WCCTSQIWYW*KDPAYHESYGSCS*STG 279
WC + Q+W+ + PAYH S+ S TG
Sbjct: 511 WCVSRQLWWGHRIPAYHVSFTDPSLQTG 538
>UniRef50_Q0V7F1 Cluster: Putative uncharacterized protein; n=1;
Phaeosphaeria nodorum|Rep: Putative uncharacterized
protein - Phaeosphaeria nodorum (Septoria nodorum)
Length = 269
Score = 31.9 bits (69), Expect = 6.8
Identities = 13/25 (52%), Positives = 17/25 (68%)
Frame = +1
Query: 10 KPQYGSYARHPWQGYIPVGAAVPPQ 84
+P YG+ A P Q YIP G A+PP+
Sbjct: 181 QPPYGAPAYPPQQPYIPNGGAIPPR 205
>UniRef50_UPI000058808D Cluster: PREDICTED: similar to trnS; n=1;
Strongylocentrotus purpuratus|Rep: PREDICTED: similar to
trnS - Strongylocentrotus purpuratus
Length = 1776
Score = 31.5 bits (68), Expect = 9.0
Identities = 18/56 (32%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -3
Query: 316 HGDSLLDQVVQIFR*IRSKTHSFHDTQDLFTS-TKSDLCNTMRVPEHDTDLGRSKT 152
H D+ + VQ + + HS QD + T D+C++++ EHD DL S T
Sbjct: 525 HTDNDVCSTVQNTKCLEDSVHSDTSDQDTRSPCTDDDVCSSVQNTEHDEDLSNSVT 580
>UniRef50_Q0HVV5 Cluster: Putative uncharacterized protein; n=18;
Shewanella|Rep: Putative uncharacterized protein -
Shewanella sp. (strain MR-7)
Length = 177
Score = 31.5 bits (68), Expect = 9.0
Identities = 22/89 (24%), Positives = 39/89 (43%)
Frame = +2
Query: 188 DSHGVAQVRFGTGKKILRIMKAMGLAPDLPEDLYYLIKKAVAMRKHLERNRKDKDSKFRL 367
DS+GV V G+ + L KA L PD + + I A L++ K S
Sbjct: 15 DSYGVLGVSLGSEIEFLTAYKAKSLIPDALSSMEFNISHAKFYMSLLDKLPKTL-SLTDA 73
Query: 368 ILVESRIHRLARYYQTKSVLPPNWKYESS 454
+V+ ++ A ++ +P +W ++ S
Sbjct: 74 AIVQIALNATAAHFMLTPQMPKSWFFDCS 102
>UniRef50_A0LD47 Cluster: Phosphonate ABC transporter, periplasmic
phosphonate-binding protein precursor; n=1;
Magnetococcus sp. MC-1|Rep: Phosphonate ABC transporter,
periplasmic phosphonate-binding protein precursor -
Magnetococcus sp. (strain MC-1)
Length = 284
Score = 31.5 bits (68), Expect = 9.0
Identities = 16/39 (41%), Positives = 23/39 (58%)
Frame = -1
Query: 216 NLTCATP*ESLSMTPIWEGVRPFLPSLKICSLISSAVSF 100
NL ATP SL+ TP+ GV PFLP+ ++ ++F
Sbjct: 15 NLLLATP--SLAQTPLIFGVHPFLPATELHKRFQPLITF 51
>UniRef50_A5C3C0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 313
Score = 31.5 bits (68), Expect = 9.0
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 2/83 (2%)
Frame = -3
Query: 394 PVNPGFNKNQPEFAVLVLPITFQMFPHGDSLLDQVVQIFR*IRSKTHSFHDTQDLFTSTK 215
P +PG ++PE +++L + + GD D V R + H D DL + K
Sbjct: 142 PSDPGTCPSEPELELIILRVINKSEAEGDMSTDLRVGFKERHRKRLHEAIDMTDLTAAQK 201
Query: 214 --SDLCNTMRVPEHDTDLGRSKT 152
++ T+++ E + + R+KT
Sbjct: 202 AATEGTETLKLAEGEREAIRAKT 224
>UniRef50_A4H3N1 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania braziliensis
Length = 2921
Score = 31.5 bits (68), Expect = 9.0
Identities = 14/26 (53%), Positives = 15/26 (57%)
Frame = -2
Query: 86 HCGGTAAPTGIYPCQGCRAYDPYCGF 9
HC TAA T QGCRAY +C F
Sbjct: 1134 HCTVTAAITSAVSVQGCRAYVEHCLF 1159
>UniRef50_Q7SA74 Cluster: Predicted protein; n=1; Neurospora
crassa|Rep: Predicted protein - Neurospora crassa
Length = 171
Score = 31.5 bits (68), Expect = 9.0
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 13 PQYGSYARHPWQGYIPVGAAVPPQCPY 93
PQ G Y QGY P G PPQ PY
Sbjct: 41 PQQGGYYPPQAQGYPPQGPGYPPQGPY 67
>UniRef50_A6QZZ0 Cluster: Predicted protein; n=1; Ajellomyces
capsulatus NAm1|Rep: Predicted protein - Ajellomyces
capsulatus NAm1
Length = 372
Score = 31.5 bits (68), Expect = 9.0
Identities = 21/60 (35%), Positives = 24/60 (40%)
Frame = -1
Query: 219 PNLTCATP*ESLSMTPIWEGVRPFLPSLKICSLISSAVSFTQVGTLRRYGSADWDIPLPR 40
PNLT + SL TP RP PS C S +S + R D PLPR
Sbjct: 179 PNLTSSPSSSSLPSTPYTRAYRPRPPSAYSC----SCISHPPIAATRHQHRHDLHTPLPR 234
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 509,112,957
Number of Sequences: 1657284
Number of extensions: 10348467
Number of successful extensions: 27594
Number of sequences better than 10.0: 46
Number of HSP's better than 10.0 without gapping: 26801
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27583
length of database: 575,637,011
effective HSP length: 94
effective length of database: 419,852,315
effective search space used: 24351434270
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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