Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_M17
         (459 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    23   1.2  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    23   1.2  
AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.        22   3.7  
AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.        22   3.7  
AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.        22   3.7  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    21   4.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    21   4.8  
EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.          21   8.5  
EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.      21   8.5  
AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein ...    21   8.5  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   8.5  

>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = -2

Query: 83  CGGTAAPT--GIYPCQGCRAY 27
           CG  A+    G+Y C+GC+ +
Sbjct: 113 CGDRASGKHYGVYSCEGCKGF 133


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 23.4 bits (48), Expect = 1.2
 Identities = 8/21 (38%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
 Frame = -2

Query: 83  CGGTAAPT--GIYPCQGCRAY 27
           CG  A+    G+Y C+GC+ +
Sbjct: 113 CGDRASGKHYGVYSCEGCKGF 133


>AY336529-1|AAQ02340.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 4   NKKPQYGSYARHPWQGYI 57
           N KP   ++A  PWQGY+
Sbjct: 297 NTKPC--TWAARPWQGYM 312


>AY336528-1|AAQ02339.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 4   NKKPQYGSYARHPWQGYI 57
           N KP   ++A  PWQGY+
Sbjct: 297 NTKPC--TWAARPWQGYM 312


>AY217097-1|AAO39761.1|  712|Apis mellifera transferrin protein.
          Length = 712

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = +1

Query: 4   NKKPQYGSYARHPWQGYI 57
           N KP   ++A  PWQGY+
Sbjct: 297 NTKPC--TWAARPWQGYM 312


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 10/27 (37%), Positives = 14/27 (51%)
 Frame = -3

Query: 229 FTSTKSDLCNTMRVPEHDTDLGRSKTL 149
           F + KS    TM +P H   L + KT+
Sbjct: 125 FKNAKSVTFQTMTIPNHYLWLYKDKTI 151


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
           protein.
          Length = 1770

 Score = 21.4 bits (43), Expect = 4.8
 Identities = 8/19 (42%), Positives = 14/19 (73%)
 Frame = -1

Query: 147 LPSLKICSLISSAVSFTQV 91
           +PS K+ ++ISS  SF ++
Sbjct: 822 VPSTKVLAMISSVKSFMEL 840


>EF625898-1|ABR45905.1|  686|Apis mellifera hexamerin protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 284 LYYLIKKAVAMRKHLERNRKD 346
           LYY + K +  R  LER   D
Sbjct: 260 LYYFLHKQLMTRYFLERMSND 280


>EF589162-1|ABQ84439.1|  686|Apis mellifera hexamerin 70c protein.
          Length = 686

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/21 (42%), Positives = 11/21 (52%)
 Frame = +2

Query: 284 LYYLIKKAVAMRKHLERNRKD 346
           LYY + K +  R  LER   D
Sbjct: 260 LYYFLHKQLMTRYFLERMSND 280


>AJ276511-1|CAC06383.1|  352|Apis mellifera Antennapedia protein
           protein.
          Length = 352

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 9/21 (42%), Positives = 9/21 (42%)
 Frame = -2

Query: 119 YHQRLVSPR*GHCGGTAAPTG 57
           Y     SP  GH G T  P G
Sbjct: 110 YRSASPSPGMGHMGHTPTPNG 130


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 8/23 (34%), Positives = 10/23 (43%)
 Frame = +3

Query: 9   KAAIWVVCTAPLARVYPSRRCRT 77
           K A+W V      +  P R C T
Sbjct: 569 KGAVWTVDEVEFYKRRPQRACST 591


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 141,449
Number of Sequences: 438
Number of extensions: 3235
Number of successful extensions: 11
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)