Samia BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_M16
         (458 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory recept...    21   4.2  
AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription fa...    21   4.2  
X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Triboliu...    21   7.3  
U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II p...    21   7.3  
U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I pr...    21   7.3  
EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...    21   7.3  
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    20   9.6  

>AM292344-1|CAL23156.1|  291|Tribolium castaneum gustatory receptor
           candidate 23 protein.
          Length = 291

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 9/20 (45%), Positives = 12/20 (60%)
 Frame = +2

Query: 389 KYFFLRFCCN*QSSNKIFFS 448
           KY++L  CC   S   IFF+
Sbjct: 54  KYYWLNVCCLNLSIVTIFFN 73


>AJ415419-1|CAC94468.1|  441|Tribolium castaneum transcription
           factor protein.
          Length = 441

 Score = 21.4 bits (43), Expect = 4.2
 Identities = 8/35 (22%), Positives = 17/35 (48%)
 Frame = +1

Query: 145 NPRSFRSLNHQTGPSGNYEPISTGPAFVDFNHPNY 249
           +P  ++ +N +  P G  E   + P ++    PN+
Sbjct: 84  DPHRWKYVNGEWVPGGKAEVPPSNPIYIHPESPNF 118


>X06905-1|CAA30009.1|  489|Tribolium castaneum protein ( Tribolium
           castaneum mRNAfor alhpa amylase 3'region. ).
          Length = 489

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +3

Query: 261 IRQPSRPWWE 290
           +   +RPWWE
Sbjct: 67  VTSSNRPWWE 76


>U04271-2|AAA03709.1|  490|Tribolium castaneum alpha-amylase II
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +3

Query: 261 IRQPSRPWWE 290
           +   +RPWWE
Sbjct: 68  VTSSNRPWWE 77


>U04271-1|AAA03708.1|  490|Tribolium castaneum alpha-amylase I
           protein.
          Length = 490

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 5/10 (50%), Positives = 7/10 (70%)
 Frame = +3

Query: 261 IRQPSRPWWE 290
           +   +RPWWE
Sbjct: 68  VTSSNRPWWE 77


>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score = 20.6 bits (41), Expect = 7.3
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 226 VDFNHPNYPPKRY 264
           +D NHP +  K Y
Sbjct: 217 LDMNHPGFADKEY 229


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 20.2 bits (40), Expect = 9.6
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -3

Query: 126 HYCRPMEHHYCHHVNSVCG 70
           H   P+   Y HH NS  G
Sbjct: 32  HGYGPLRTSYQHHFNSPAG 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,872
Number of Sequences: 336
Number of extensions: 2560
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 52
effective length of database: 105,113
effective search space used: 10511300
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)