Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_M16
(458 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z82058-6|CAB04868.2| 163|Caenorhabditis elegans Hypothetical pr... 28 2.8
Z81076-9|CAB03057.1| 372|Caenorhabditis elegans Hypothetical pr... 28 3.8
Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical pr... 28 3.8
U23179-1|AAY55860.1| 334|Caenorhabditis elegans Hypothetical pr... 27 5.0
Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical pr... 27 6.6
Z81496-11|CAB04069.2| 448|Caenorhabditis elegans Hypothetical p... 27 8.7
Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 8.7
Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical p... 27 8.7
Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical p... 27 8.7
Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical p... 27 8.7
Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical pr... 27 8.7
AY204204-1|AAO39205.1| 448|Caenorhabditis elegans nuclear recep... 27 8.7
AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.7
AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha... 27 8.7
>Z82058-6|CAB04868.2| 163|Caenorhabditis elegans Hypothetical
protein T27C5.7 protein.
Length = 163
Score = 28.3 bits (60), Expect = 2.8
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -1
Query: 140 TPHVVTIAVRWNTTIVTT*TLFAAPMPNTGEE 45
TP VVT TT +TT T A P P EE
Sbjct: 28 TPAVVTTTTTTTTTTMTTTTTTAIPCPTDWEE 59
>Z81076-9|CAB03057.1| 372|Caenorhabditis elegans Hypothetical
protein F35C5.8 protein.
Length = 372
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/34 (44%), Positives = 18/34 (52%)
Frame = -1
Query: 449 QKRKFYLNFVNYNRNVKRNIYINALLN*NFGKYY 348
QKR F N VN + N + N LLN N G +Y
Sbjct: 275 QKRDFNFNLVNSDSTKPVNAFYNGLLNLN-GNWY 307
>Z77665-8|CAB01224.2| 135|Caenorhabditis elegans Hypothetical
protein K02E11.7 protein.
Length = 135
Score = 27.9 bits (59), Expect = 3.8
Identities = 15/43 (34%), Positives = 21/43 (48%)
Frame = -1
Query: 458 NMLQKRKFYLNFVNYNRNVKRNIYINALLN*NFGKYYKINHHF 330
N+ K K YN+N K+ + I +L +FG YY N F
Sbjct: 83 NIQTKAKVVAGKTTYNKN-KKALIIKQILKTDFGMYYTGNKKF 124
>U23179-1|AAY55860.1| 334|Caenorhabditis elegans Hypothetical
protein C27D6.11 protein.
Length = 334
Score = 27.5 bits (58), Expect = 5.0
Identities = 13/36 (36%), Positives = 16/36 (44%)
Frame = +2
Query: 287 GSKCLIKISDFKTRRNDD*SYNIFQSFNLVMHLYKY 394
G L K+ D KT DD + Q +MHL Y
Sbjct: 123 GGDLLRKMKDIKTMNEDDAKFTFRQFIAALMHLQSY 158
>Z92831-2|CAB07368.2| 861|Caenorhabditis elegans Hypothetical
protein F22G12.4 protein.
Length = 861
Score = 27.1 bits (57), Expect = 6.6
Identities = 12/34 (35%), Positives = 16/34 (47%)
Frame = -3
Query: 156 GSRVRNTTRGHYCRPMEHHYCHHVNSVCGTHAKY 55
G+R T+R H+CR H C + AKY
Sbjct: 804 GARFSLTSRKHHCRHCGRHVCSKCSETTMPIAKY 837
>Z81496-11|CAB04069.2| 448|Caenorhabditis elegans Hypothetical
protein F09C6.9 protein.
Length = 448
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 168 ERTKGSRVRNTTRGHYCRPMEHHYCHHVNSVCGTHAKYRRR-RTHESFHCRI 16
+++ GSRV T C H Y ++V S G +RR + SF C++
Sbjct: 37 KKSIGSRVERPTECLVCGRSAHGYHYNVASCNGCKTFFRRMCLSGRSFSCKL 88
>Z70286-6|CAA94293.1| 3672|Caenorhabditis elegans Hypothetical
protein K08C7.3b protein.
Length = 3672
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1
Query: 97 IVVFHRTAIV--TTCGVANPRSFRSLNHQTGPSGNYEPISTGPAFVDFNHPNYPPKRYDN 270
I + HR I +TCG + + S Y P+++ D ++ +Y+N
Sbjct: 35 ITISHRKPITATSTCGEIQGQPVTEIYCSLTGSTQYTPLNSYSYQDDEQQKSW--SQYEN 92
Query: 271 PLARGGK*MSH 303
P+ RGG H
Sbjct: 93 PMVRGGHGCGH 103
>Z70286-5|CAB61016.1| 3704|Caenorhabditis elegans Hypothetical
protein K08C7.3a protein.
Length = 3704
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1
Query: 97 IVVFHRTAIV--TTCGVANPRSFRSLNHQTGPSGNYEPISTGPAFVDFNHPNYPPKRYDN 270
I + HR I +TCG + + S Y P+++ D ++ +Y+N
Sbjct: 35 ITISHRKPITATSTCGEIQGQPVTEIYCSLTGSTQYTPLNSYSYQDDEQQKSW--SQYEN 92
Query: 271 PLARGGK*MSH 303
P+ RGG H
Sbjct: 93 PMVRGGHGCGH 103
>Z69904-9|CAH60797.1| 2101|Caenorhabditis elegans Hypothetical protein
F07A11.6e protein.
Length = 2101
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 109 GTPLLSPRELCLRHPCQIPAKKNTRKLSLSN 17
GTPLLSP+ L +H + +T++ S+S+
Sbjct: 1139 GTPLLSPKILSPKHLSPKTSTSSTKRSSISD 1169
>Z69904-8|CAD57719.1| 2392|Caenorhabditis elegans Hypothetical protein
F07A11.6c protein.
Length = 2392
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 109 GTPLLSPRELCLRHPCQIPAKKNTRKLSLSN 17
GTPLLSP+ L +H + +T++ S+S+
Sbjct: 1430 GTPLLSPKILSPKHLSPKTSTSSTKRSSISD 1460
>Z69904-7|CAB54502.2| 2407|Caenorhabditis elegans Hypothetical protein
F07A11.6b protein.
Length = 2407
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 109 GTPLLSPRELCLRHPCQIPAKKNTRKLSLSN 17
GTPLLSP+ L +H + +T++ S+S+
Sbjct: 1445 GTPLLSPKILSPKHLSPKTSTSSTKRSSISD 1475
>Z69904-6|CAB54501.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 109 GTPLLSPRELCLRHPCQIPAKKNTRKLSLSN 17
GTPLLSP+ L +H + +T++ S+S+
Sbjct: 1445 GTPLLSPKILSPKHLSPKTSTSSTKRSSISD 1475
>Z66511-12|CAH60796.1| 2101|Caenorhabditis elegans Hypothetical
protein F07A11.6e protein.
Length = 2101
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 109 GTPLLSPRELCLRHPCQIPAKKNTRKLSLSN 17
GTPLLSP+ L +H + +T++ S+S+
Sbjct: 1139 GTPLLSPKILSPKHLSPKTSTSSTKRSSISD 1169
>Z66511-11|CAD57694.1| 2392|Caenorhabditis elegans Hypothetical
protein F07A11.6c protein.
Length = 2392
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 109 GTPLLSPRELCLRHPCQIPAKKNTRKLSLSN 17
GTPLLSP+ L +H + +T++ S+S+
Sbjct: 1430 GTPLLSPKILSPKHLSPKTSTSSTKRSSISD 1460
>Z66511-10|CAB54211.2| 2407|Caenorhabditis elegans Hypothetical
protein F07A11.6b protein.
Length = 2407
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 109 GTPLLSPRELCLRHPCQIPAKKNTRKLSLSN 17
GTPLLSP+ L +H + +T++ S+S+
Sbjct: 1445 GTPLLSPKILSPKHLSPKTSTSSTKRSSISD 1475
>Z66511-9|CAB54210.3| 2211|Caenorhabditis elegans Hypothetical protein
F07A11.6a protein.
Length = 2211
Score = 26.6 bits (56), Expect = 8.7
Identities = 12/31 (38%), Positives = 20/31 (64%)
Frame = -2
Query: 109 GTPLLSPRELCLRHPCQIPAKKNTRKLSLSN 17
GTPLLSP+ L +H + +T++ S+S+
Sbjct: 1445 GTPLLSPKILSPKHLSPKTSTSSTKRSSISD 1475
>AY204204-1|AAO39205.1| 448|Caenorhabditis elegans nuclear receptor
NHR-116 protein.
Length = 448
Score = 26.6 bits (56), Expect = 8.7
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = -3
Query: 168 ERTKGSRVRNTTRGHYCRPMEHHYCHHVNSVCGTHAKYRRR-RTHESFHCRI 16
+++ GSRV T C H Y ++V S G +RR + SF C++
Sbjct: 37 KKSIGSRVERPTECLVCGRSAHGYHYNVASCNGCKTFFRRMCLSGRSFSCKL 88
>AB016806-1|BAA32347.1| 3704|Caenorhabditis elegans laminin alpha
chain protein.
Length = 3704
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1
Query: 97 IVVFHRTAIV--TTCGVANPRSFRSLNHQTGPSGNYEPISTGPAFVDFNHPNYPPKRYDN 270
I + HR I +TCG + + S Y P+++ D ++ +Y+N
Sbjct: 35 ITISHRKPITATSTCGEIQGQPVTEIYCSLTGSTQYTPLNSYSYQDDEQQKSW--SQYEN 92
Query: 271 PLARGGK*MSH 303
P+ RGG H
Sbjct: 93 PMVRGGHGCGH 103
>AB001074-1|BAA19229.1| 3704|Caenorhabditis elegans laminin alpha
protein.
Length = 3704
Score = 26.6 bits (56), Expect = 8.7
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
Frame = +1
Query: 97 IVVFHRTAIV--TTCGVANPRSFRSLNHQTGPSGNYEPISTGPAFVDFNHPNYPPKRYDN 270
I + HR I +TCG + + S Y P+++ D ++ +Y+N
Sbjct: 35 ITISHRKPITATSTCGEIQGQPVTEIYCSLTGSTQYTPLNSYSYQDDEQQKSW--SQYEN 92
Query: 271 PLARGGK*MSH 303
P+ RGG H
Sbjct: 93 PMVRGGHGCGH 103
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,785,909
Number of Sequences: 27780
Number of extensions: 235946
Number of successful extensions: 624
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 603
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 624
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 820565746
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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