Samia BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_M16
         (458 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl cycl...    23   1.6  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    21   6.4  
DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor pr...    21   8.5  
AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase ...    21   8.5  

>AB193550-1|BAD66824.1|  699|Apis mellifera soluble guanylyl
          cyclase alpha 1 subunit protein.
          Length = 699

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 8/11 (72%), Positives = 10/11 (90%)
 Frame = +3

Query: 66 GCRKQSSRGDN 98
          GC +Q+SRGDN
Sbjct: 13 GCDEQTSRGDN 23


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 21.0 bits (42), Expect = 6.4
 Identities = 8/30 (26%), Positives = 15/30 (50%)
 Frame = -2

Query: 358 ENIIRLIIISPSFKIAYLYETFTSHHGREG 269
           E   + ++   +F    LY++    HG+EG
Sbjct: 59  EKTYQCLLCQKAFDQKNLYQSHLRSHGKEG 88


>DQ869053-1|ABJ09600.1|  459|Apis mellifera capa-like receptor
           protein.
          Length = 459

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 7/13 (53%), Positives = 10/13 (76%)
 Frame = -1

Query: 431 LNFVNYNRNVKRN 393
           +N+V Y +N KRN
Sbjct: 174 INYVEYPQNSKRN 186


>AY855337-1|AAW47987.1|  510|Apis mellifera tyrosine hydroxylase
           protein.
          Length = 510

 Score = 20.6 bits (41), Expect = 8.5
 Identities = 6/13 (46%), Positives = 8/13 (61%)
 Frame = +1

Query: 226 VDFNHPNYPPKRY 264
           +D NHP +  K Y
Sbjct: 195 LDMNHPGFADKEY 207


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 133,707
Number of Sequences: 438
Number of extensions: 3133
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 12189771
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)