Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_M11
(471 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024817-44|AAK93864.2| 168|Caenorhabditis elegans Hypothetical... 86 1e-17
Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical pr... 28 3.9
Z81117-14|CAB03313.3| 272|Caenorhabditis elegans Hypothetical p... 28 3.9
AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein. 28 3.9
AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein. 28 3.9
AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein. 28 3.9
AF273806-1|AAG15155.1| 395|Caenorhabditis elegans nuclear recep... 28 3.9
AF022976-14|AAC69077.1| 393|Caenorhabditis elegans Nuclear horm... 28 3.9
U40417-7|AAA81416.1| 103|Caenorhabditis elegans Saposin-like pr... 27 5.1
Z81595-4|CAB04751.1| 91|Caenorhabditis elegans Hypothetical pr... 27 6.8
AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical... 27 9.0
>AC024817-44|AAK93864.2| 168|Caenorhabditis elegans Hypothetical
protein Y54G2A.23 protein.
Length = 168
Score = 85.8 bits (203), Expect = 1e-17
Identities = 37/94 (39%), Positives = 59/94 (62%)
Frame = +2
Query: 188 MFHLLFIAATIQVALSLKEGDCEVCVKTVEKFAATLSDDVKKEPKLIEVEFKKFCKTSKN 367
M L+ + + + V S CEVC K ++ A + K +P I ++ C+T++N
Sbjct: 1 MSRLVLLISLVIVVASAAAPQCEVCKKVLDDVMAKVPAGDKSKPDAIGKVIREHCETTRN 60
Query: 368 KEHRFCYYLGGLEESATGILSELSKPLSWSMPAD 469
KE++FC+Y+G L ESAT I++E++KPLSWSMP +
Sbjct: 61 KENKFCFYIGALPESATSIMNEVTKPLSWSMPTE 94
>Z96100-3|CAD60418.1| 893|Caenorhabditis elegans Hypothetical
protein H15N14.1e protein.
Length = 893
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 218 IQVALSLKEGDCEVCVKTVEKFAATL-SDDVKKEPKLIEVEFKK 346
++ ALSL + ++ ++ EK++ + +V K+P++ EVE KK
Sbjct: 234 VESALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKK 277
>Z96100-2|CAD60417.1| 912|Caenorhabditis elegans Hypothetical
protein H15N14.1d protein.
Length = 912
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 218 IQVALSLKEGDCEVCVKTVEKFAATL-SDDVKKEPKLIEVEFKK 346
++ ALSL + ++ ++ EK++ + +V K+P++ EVE KK
Sbjct: 234 VESALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKK 277
>Z96100-1|CAB09530.2| 964|Caenorhabditis elegans Hypothetical
protein H15N14.1c protein.
Length = 964
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 218 IQVALSLKEGDCEVCVKTVEKFAATL-SDDVKKEPKLIEVEFKK 346
++ ALSL + ++ ++ EK++ + +V K+P++ EVE KK
Sbjct: 305 VESALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKK 348
>Z81117-14|CAB03313.3| 272|Caenorhabditis elegans Hypothetical
protein T06E6.3 protein.
Length = 272
Score = 27.9 bits (59), Expect = 3.9
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 5/63 (7%)
Frame = -1
Query: 378 LCSLFFEVL--QNFLNSTSINF---GSFFTSSDSVAANFSTVFTQTSQSPSFNERATWIV 214
L +LFF++L QN+ N+ + F G +F VFT T S N A W V
Sbjct: 106 LITLFFQILGCQNYYNAKYLAFQYSGGKICRWYGTYGDFYQVFTLTITSAFLNFSAIWKV 165
Query: 213 AAM 205
A +
Sbjct: 166 AKL 168
>AY150817-1|AAN61051.1| 893|Caenorhabditis elegans ADR-1E protein.
Length = 893
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 218 IQVALSLKEGDCEVCVKTVEKFAATL-SDDVKKEPKLIEVEFKK 346
++ ALSL + ++ ++ EK++ + +V K+P++ EVE KK
Sbjct: 234 VESALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKK 277
>AY150816-1|AAN61050.1| 912|Caenorhabditis elegans ADR-1D protein.
Length = 912
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 218 IQVALSLKEGDCEVCVKTVEKFAATL-SDDVKKEPKLIEVEFKK 346
++ ALSL + ++ ++ EK++ + +V K+P++ EVE KK
Sbjct: 234 VESALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKK 277
>AY150815-1|AAN61049.1| 964|Caenorhabditis elegans ADR-1C protein.
Length = 964
Score = 27.9 bits (59), Expect = 3.9
Identities = 14/44 (31%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Frame = +2
Query: 218 IQVALSLKEGDCEVCVKTVEKFAATL-SDDVKKEPKLIEVEFKK 346
++ ALSL + ++ ++ EK++ + +V K+P++ EVE KK
Sbjct: 305 VESALSLLDLMQKIIAESAEKYSPVFEASEVPKDPEIPEVEVKK 348
>AF273806-1|AAG15155.1| 395|Caenorhabditis elegans nuclear receptor
NHR-58 protein.
Length = 395
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 259 LCKNCRKIRGHAVG*CEKRAKINR 330
LCK CR +R +AVG EK+ + +R
Sbjct: 58 LCKPCRLVRCYAVGMDEKKFQFDR 81
>AF022976-14|AAC69077.1| 393|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 58, isoform a protein.
Length = 393
Score = 27.9 bits (59), Expect = 3.9
Identities = 12/24 (50%), Positives = 17/24 (70%)
Frame = +1
Query: 259 LCKNCRKIRGHAVG*CEKRAKINR 330
LCK CR +R +AVG EK+ + +R
Sbjct: 56 LCKPCRLVRCYAVGMDEKKFQFDR 79
>U40417-7|AAA81416.1| 103|Caenorhabditis elegans Saposin-like
protein family protein4 protein.
Length = 103
Score = 27.5 bits (58), Expect = 5.1
Identities = 13/50 (26%), Positives = 24/50 (48%)
Frame = +2
Query: 197 LLFIAATIQVALSLKEGDCEVCVKTVEKFAATLSDDVKKEPKLIEVEFKK 346
L+F+A + + C++C V+K+ ++ DV K + E KK
Sbjct: 10 LVFVATAVVLPHQRNSLGCQMCELAVKKYDGSVDKDVNGIKKDFDTECKK 59
>Z81595-4|CAB04751.1| 91|Caenorhabditis elegans Hypothetical
protein T22H2.4 protein.
Length = 91
Score = 27.1 bits (57), Expect = 6.8
Identities = 22/67 (32%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 251 CEVCVKTVEKFAATLSDDVKKEPKLIEVEFKKFCKTSKNKEHRFCYYL-GGLEESATGIL 427
C++C K +K A + KK K+ + KK K SK + R L L +TGI
Sbjct: 16 CKICAKVCKKCAKNVQKKCKKCGKMCKKCAKKCLKKSKFSDPRNPKMLPTSLLVCSTGIP 75
Query: 428 SELSKPL 448
E S L
Sbjct: 76 IECSAEL 82
>AL021497-13|CAA16411.2| 550|Caenorhabditis elegans Hypothetical
protein Y51A2D.18 protein.
Length = 550
Score = 26.6 bits (56), Expect = 9.0
Identities = 20/67 (29%), Positives = 34/67 (50%), Gaps = 7/67 (10%)
Frame = +2
Query: 185 SMFHLLFIAATIQVAL-------SLKEGDCEVCVKTVEKFAATLSDDVKKEPKLIEVEFK 343
SMF++++ A +V SL EG E+C + ++K + + + + I VE+
Sbjct: 62 SMFYMMYAGAAPRVISCDNIVFDSLLEGK-EICFE-LDKMGNCSHPEFQYQFRSINVEYN 119
Query: 344 KFCKTSK 364
FC TSK
Sbjct: 120 YFCNTSK 126
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,593,289
Number of Sequences: 27780
Number of extensions: 173396
Number of successful extensions: 477
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 471
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 477
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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