Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= I09A02NGRL0004_M08
(332 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical pr... 38 0.001
Z22176-6|CAA80139.1| 133|Caenorhabditis elegans Hypothetical pr... 33 0.066
AF040659-5|AAO12389.1| 674|Caenorhabditis elegans Half transpor... 29 1.1
AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transpor... 29 1.1
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 27 3.3
L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp (spli... 27 3.3
AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical ... 27 4.3
Z54281-5|CAA91047.1| 191|Caenorhabditis elegans Hypothetical pr... 26 5.7
AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical... 26 5.7
AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical ... 26 5.7
AF040645-2|AAB94980.1| 105|Caenorhabditis elegans Hypothetical ... 26 7.5
Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical p... 25 10.0
Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical p... 25 10.0
Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical p... 25 10.0
Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical p... 25 10.0
Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical p... 25 10.0
Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical pr... 25 10.0
Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical pr... 25 10.0
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 25 10.0
>Z81048-2|CAB02840.1| 553|Caenorhabditis elegans Hypothetical
protein C41G7.3 protein.
Length = 553
Score = 38.3 bits (85), Expect = 0.001
Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = +1
Query: 106 FAGQIRKGEEKSWYDSLKKPSWTPPK-WVFGPAWTGLYSGMGIASYLVWEECGGF 267
FA + + W+ +LKKP+W P V+ S +G ASYLV++ GGF
Sbjct: 409 FASFAKDQQVADWWAALKKPNWAPKDVRVYSAVDLLTLSPLGYASYLVYKNGGGF 463
>Z22176-6|CAA80139.1| 133|Caenorhabditis elegans Hypothetical
protein ZK1098.7 protein.
Length = 133
Score = 32.7 bits (71), Expect = 0.066
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Frame = +1
Query: 76 NVGGWVNGLYFAGQIRKGEEKSWYD-SLKKPSWTPPKW 186
N+ V GL AGQ+ + WYD + P TPP W
Sbjct: 13 NIFSRVTGLIRAGQLNWADRPLWYDVYVSSPPLTPPDW 50
>AF040659-5|AAO12389.1| 674|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform b protein.
Length = 674
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 228 YRLLSGVGGMWRIYLMRQFYLLAYTVGKLLL 320
+RLL +G W+ Y M F+L Y++ ++ +
Sbjct: 192 FRLLGYMGRQWKYYGMAFFFLFCYSLSRVFI 222
>AF040659-4|AAK39394.1| 815|Caenorhabditis elegans Half transporter
(pgp related)protein 9, isoform a protein.
Length = 815
Score = 28.7 bits (61), Expect = 1.1
Identities = 10/31 (32%), Positives = 19/31 (61%)
Frame = +3
Query: 228 YRLLSGVGGMWRIYLMRQFYLLAYTVGKLLL 320
+RLL +G W+ Y M F+L Y++ ++ +
Sbjct: 192 FRLLGYMGRQWKYYGMAFFFLFCYSLSRVFI 222
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical protein
C25A8.4 protein.
Length = 1067
Score = 27.1 bits (57), Expect = 3.3
Identities = 14/30 (46%), Positives = 19/30 (63%)
Frame = +2
Query: 239 IWCGRNVADLPDEAVLPLSLYGGQTAPELG 328
IW +NV PD+ VL LS +G QT ++G
Sbjct: 948 IW--KNVGLKPDKLVLELSPFGWQTGKKVG 975
>L14433-3|AAA27977.1| 2329|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 8 protein.
Length = 2329
Score = 27.1 bits (57), Expect = 3.3
Identities = 10/26 (38%), Positives = 15/26 (57%)
Frame = -2
Query: 265 IRHIPPTPDRRRYPFHCKDPSRLVQT 188
++H PP P +RRY F ++ QT
Sbjct: 451 LKHRPPKPQKRRYLFRSFKATKFFQT 476
>AF101316-3|AAC69232.2| 508|Caenorhabditis elegans Hypothetical
protein F52F10.2 protein.
Length = 508
Score = 26.6 bits (56), Expect = 4.3
Identities = 11/26 (42%), Positives = 14/26 (53%)
Frame = -1
Query: 125 FRIWPAKYSPLTQPPTFGRIIEPMAC 48
F +W KY + P GRII +AC
Sbjct: 111 FAVWSFKYKTVKWPLIAGRIIAMVAC 136
>Z54281-5|CAA91047.1| 191|Caenorhabditis elegans Hypothetical
protein F46C5.8 protein.
Length = 191
Score = 26.2 bits (55), Expect = 5.7
Identities = 11/21 (52%), Positives = 15/21 (71%)
Frame = +3
Query: 261 RIYLMRQFYLLAYTVGKLLLN 323
RI L++ FY++AY VG LN
Sbjct: 51 RIILLQGFYIVAYAVGIYYLN 71
>AL110484-27|CAI46626.1| 397|Caenorhabditis elegans Hypothetical
protein Y38E10A.28 protein.
Length = 397
Score = 26.2 bits (55), Expect = 5.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 213 LQWNGYRLLSGVGGMWRI 266
LQWNG ++ +G G W I
Sbjct: 368 LQWNGRKIWNGKTGKWEI 385
>AF077542-5|AAC26299.1| 883|Caenorhabditis elegans Hypothetical
protein Y57G7A.6 protein.
Length = 883
Score = 26.2 bits (55), Expect = 5.7
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
Frame = +1
Query: 61 SIILPNV-GGWVNGLYFAGQIRKGEEKSWYDSLKKPSW 171
S I+ NV G+ NG+ G + + W + L KPS+
Sbjct: 281 SQIIRNVTAGFANGISDIGMLTSDSKDQWLERLLKPSF 318
>AF040645-2|AAB94980.1| 105|Caenorhabditis elegans Hypothetical
protein F52C6.6 protein.
Length = 105
Score = 25.8 bits (54), Expect = 7.5
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -3
Query: 276 SSGKSATFLPHQIGGDTHSTVKTRPG 199
SSGKS TF ++ D H + K PG
Sbjct: 76 SSGKSTTFDGIKLWSDDHGSGKAAPG 101
>Z72510-6|CAM84693.1| 2892|Caenorhabditis elegans Hypothetical protein
F53B7.5b protein.
Length = 2892
Score = 25.4 bits (53), Expect = 10.0
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YQTLVVGLTGCTLRARSGRVKRNLGTI-H*RNPAGHLLNGCLDQP 202
Y+T V GC + SG V + T+ NP+ +L + C P
Sbjct: 1712 YKTTTVNNVGCLISTGSGAVATTVSTLAPVTNPSTNLCSQCARLP 1756
>Z72510-5|CAM84692.1| 3095|Caenorhabditis elegans Hypothetical protein
F53B7.5a protein.
Length = 3095
Score = 25.4 bits (53), Expect = 10.0
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YQTLVVGLTGCTLRARSGRVKRNLGTI-H*RNPAGHLLNGCLDQP 202
Y+T V GC + SG V + T+ NP+ +L + C P
Sbjct: 1712 YKTTTVNNVGCLISTGSGAVATTVSTLAPVTNPSTNLCSQCARLP 1756
>Z72507-18|CAM84805.1| 2892|Caenorhabditis elegans Hypothetical
protein F53B7.5b protein.
Length = 2892
Score = 25.4 bits (53), Expect = 10.0
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YQTLVVGLTGCTLRARSGRVKRNLGTI-H*RNPAGHLLNGCLDQP 202
Y+T V GC + SG V + T+ NP+ +L + C P
Sbjct: 1712 YKTTTVNNVGCLISTGSGAVATTVSTLAPVTNPSTNLCSQCARLP 1756
>Z72507-17|CAM84804.1| 3095|Caenorhabditis elegans Hypothetical
protein F53B7.5a protein.
Length = 3095
Score = 25.4 bits (53), Expect = 10.0
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = +2
Query: 71 YQTLVVGLTGCTLRARSGRVKRNLGTI-H*RNPAGHLLNGCLDQP 202
Y+T V GC + SG V + T+ NP+ +L + C P
Sbjct: 1712 YKTTTVNNVGCLISTGSGAVATTVSTLAPVTNPSTNLCSQCARLP 1756
>Z70757-4|CAA94800.1| 1208|Caenorhabditis elegans Hypothetical
protein ZK287.4 protein.
Length = 1208
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/26 (46%), Positives = 15/26 (57%)
Frame = -1
Query: 278 PHQVNPPHSSHTR*EAIPIPL*RPVQ 201
PH + P +SH E+IP P PVQ
Sbjct: 858 PHNLCCPKTSHLVPESIPAPPFEPVQ 883
>Z54237-10|CAJ43909.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 248 GRNVADLPDEAVLPLSLYGGQTAPELGL 331
G V + PD AVL +++ GG A GL
Sbjct: 18 GFGVTEAPDGAVLIVNVIGGSLADRAGL 45
>Z54237-9|CAA90991.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 248 GRNVADLPDEAVLPLSLYGGQTAPELGL 331
G V + PD AVL +++ GG A GL
Sbjct: 18 GFGVTEAPDGAVLIVNVIGGSLADRAGL 45
>Z54237-7|CAB54312.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 248 GRNVADLPDEAVLPLSLYGGQTAPELGL 331
G V + PD AVL +++ GG A GL
Sbjct: 18 GFGVTEAPDGAVLIVNVIGGSLADRAGL 45
>Z54237-6|CAE52903.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 248 GRNVADLPDEAVLPLSLYGGQTAPELGL 331
G V + PD AVL +++ GG A GL
Sbjct: 18 GFGVTEAPDGAVLIVNVIGGSLADRAGL 45
>Z54235-13|CAJ43902.1| 684|Caenorhabditis elegans Hypothetical
protein T11B7.4e protein.
Length = 684
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 248 GRNVADLPDEAVLPLSLYGGQTAPELGL 331
G V + PD AVL +++ GG A GL
Sbjct: 18 GFGVTEAPDGAVLIVNVIGGSLADRAGL 45
>Z54235-11|CAA90978.1| 1424|Caenorhabditis elegans Hypothetical
protein T11B7.4d protein.
Length = 1424
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 248 GRNVADLPDEAVLPLSLYGGQTAPELGL 331
G V + PD AVL +++ GG A GL
Sbjct: 18 GFGVTEAPDGAVLIVNVIGGSLADRAGL 45
>Z54235-9|CAB54190.2| 645|Caenorhabditis elegans Hypothetical
protein T11B7.4b protein.
Length = 645
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 248 GRNVADLPDEAVLPLSLYGGQTAPELGL 331
G V + PD AVL +++ GG A GL
Sbjct: 18 GFGVTEAPDGAVLIVNVIGGSLADRAGL 45
>Z54235-8|CAE52906.1| 425|Caenorhabditis elegans Hypothetical
protein T11B7.4a protein.
Length = 425
Score = 25.4 bits (53), Expect = 10.0
Identities = 12/28 (42%), Positives = 16/28 (57%)
Frame = +2
Query: 248 GRNVADLPDEAVLPLSLYGGQTAPELGL 331
G V + PD AVL +++ GG A GL
Sbjct: 18 GFGVTEAPDGAVLIVNVIGGSLADRAGL 45
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 25.4 bits (53), Expect = 10.0
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Frame = +1
Query: 58 GSIILPNVGGWVNGLYFAG-QIRKGEEKSWYDSL 156
G +L VGGW N YF+ G+ K + DS+
Sbjct: 1566 GVRVLFAVGGWDNSQYFSSVAADSGKRKKFVDSI 1599
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,734,655
Number of Sequences: 27780
Number of extensions: 226077
Number of successful extensions: 536
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 524
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 535
length of database: 12,740,198
effective HSP length: 72
effective length of database: 10,740,038
effective search space used: 408121444
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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