Samia BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= I09A02NGRL0004_M06
         (370 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC045639-1|AAH45639.2|  644|Homo sapiens SUMO1/sentrin specific ...    30   2.7  
AF149770-1|AAF31171.1|  643|Homo sapiens sentrin/SUMO-specific p...    30   2.7  
AK026249-1|BAB15412.1|  160|Homo sapiens protein ( Homo sapiens ...    29   6.2  

>BC045639-1|AAH45639.2|  644|Homo sapiens SUMO1/sentrin specific
           peptidase 1 protein.
          Length = 644

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +3

Query: 42  LAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKV 155
           L KE+ V + Q +QK   KL  + D+F +  EE++K++
Sbjct: 394 LEKEIPVTVVQETQKKGHKLTDSEDEFPEITEEMEKEI 431


>AF149770-1|AAF31171.1|  643|Homo sapiens sentrin/SUMO-specific
           protease protein.
          Length = 643

 Score = 29.9 bits (64), Expect = 2.7
 Identities = 14/38 (36%), Positives = 24/38 (63%)
 Frame = +3

Query: 42  LAKEVGVNMDQTSQKLAPKLKAAYDDFVKHAEEVQKKV 155
           L KE+ V + Q +QK   KL  + D+F +  EE++K++
Sbjct: 394 LEKEIPVTVVQETQKKGHKLTDSEDEFPEITEEMEKEI 431


>AK026249-1|BAB15412.1|  160|Homo sapiens protein ( Homo sapiens
           cDNA: FLJ22596 fis, clone HSI03808. ).
          Length = 160

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = +2

Query: 29  GEPEPGEGSRRQHGSDLTETGAKTE 103
           G P+ G GSR +H     ETG  T+
Sbjct: 88  GSPQSGRGSRSRHNESTLETGTITD 112


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,793,709
Number of Sequences: 237096
Number of extensions: 660164
Number of successful extensions: 1756
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1756
length of database: 76,859,062
effective HSP length: 81
effective length of database: 57,654,286
effective search space used: 2363825726
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)